MGE detailed information
MGE type: Genomic_island MGE length: 36727 bp
Accession: NZ_LR890349 Location: 3934158..3970884 Organism: Escherichia coli isolate MSB1_9D-sc-2280338 Replicon: chromosome
Accession: NZ_LR890349 Location: 3934158..3970884 Organism: Escherichia coli isolate MSB1_9D-sc-2280338 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW03_RS19145 () | 3930604..3931713 | + | 1110 | WP_001211967.1 | AI-2E family transporter | - |
| JMW03_RS19150 () | 3931833..3933617 | + | 1785 | WP_001217015.1 | diguanylate cyclase | - |
| JMW03_RS19155 () | 3933630..3934034 | - | 405 | WP_000334957.1 | helix-turn-helix domain-containing protein | - |
| JMW03_RS19160 () | 3934158..3934802 | - | 645 | WP_001547746.1 | hypothetical protein | VF |
| JMW03_RS19165 () | 3935077..3935774 | - | 698 | Protein_3754 | IS1 family transposase IS1R | Transposase |
| JMW03_RS19170 () | 3936077..3936940 | + | 864 | WP_016246878.1 | GTPase family protein | - |
| JMW03_RS19175 () | 3937032..3937853 | + | 822 | WP_016246877.1 | DUF945 domain-containing protein | - |
| JMW03_RS19180 () | 3938070..3938771 | + | 702 | WP_137474786.1 | WYL domain-containing protein | - |
| JMW03_RS19185 () | 3938812..3939048 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| JMW03_RS19190 () | 3939048..3939491 | + | 444 | WP_001547764.1 | phage transcriptional regulator | - |
| JMW03_RS19195 () | 3939514..3939981 | + | 468 | WP_001547765.1 | hypothetical protein | - |
| JMW03_RS19200 () | 3940058..3940297 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| JMW03_RS19205 () | 3940395..3940853 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| JMW03_RS19210 () | 3940869..3941345 | + | 477 | WP_000811693.1 | RadC family protein | - |
| JMW03_RS19215 () | 3941354..3941575 | + | 222 | WP_016246875.1 | DUF987 domain-containing protein | - |
| JMW03_RS19220 () | 3941594..3941911 | + | 318 | WP_016246874.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JMW03_RS19225 () | 3941932..3942273 | + | 342 | WP_016246873.1 | TA system toxin CbtA family protein | Toxin Detail |
| JMW03_RS19235 () | 3942845..3944098 | - | 1254 | WP_201514041.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JMW03_RS19240 () | 3944110..3945213 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| JMW03_RS19245 () | 3945501..3946556 | + | 1056 | WP_000749881.1 | phosphoporin PhoE | - |
| JMW03_RS19250 () | 3946595..3946996 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| JMW03_RS19255 () | 3947054..3948298 | - | 1245 | WP_073464911.1 | esterase FrsA | - |
| - () | 3947714..3947794 | - | 81 | NuclAT_10 | - | - |
| - () | 3947714..3947794 | - | 81 | NuclAT_10 | - | - |
| - () | 3947714..3947794 | - | 81 | NuclAT_10 | - | - |
| - () | 3947714..3947794 | - | 81 | NuclAT_10 | - | - |
| JMW03_RS19260 () | 3948390..3948848 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| JMW03_RS19265 () | 3949109..3950566 | + | 1458 | WP_001293009.1 | cytosol nonspecific dipeptidase | - |
| JMW03_RS19270 () | 3950623..3951144 | - | 522 | Protein_3774 | peptide chain release factor H | - |
| JMW03_RS19275 () | 3951143..3951346 | - | 204 | Protein_3775 | RNA ligase RtcB family protein | - |
| JMW03_RS19280 () | 3951592..3952044 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| JMW03_RS19285 () | 3952054..3952452 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| JMW03_RS19290 () | 3952455..3952748 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| JMW03_RS19295 () | 3952800..3953855 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| JMW03_RS19300 () | 3953926..3954711 | - | 786 | WP_000207587.1 | Chemotaxis protein LafU | VF |
| JMW03_RS19305 () | 3954683..3956395 | + | 1713 | Protein_3781 | Flagellar biosynthesis protein FlhA | VF |
| JMW03_RS19310 () | 3956619..3957116 | - | 498 | WP_000006242.1 | REP-associated tyrosine transposase RayT | - |
| JMW03_RS19315 () | 3957292..3958041 | - | 750 | WP_000093940.1 | hypothetical protein | VF |
| JMW03_RS19320 () | 3958342..3959082 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| JMW03_RS19325 () | 3959053..3959820 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| JMW03_RS19330 () | 3960026..3960604 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| JMW03_RS19335 () | 3960844..3963288 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| JMW03_RS19340 () | 3963331..3963777 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| JMW03_RS19345 () | 3963958..3964728 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| JMW03_RS19350 () | 3964770..3965906 | - | 1137 | Protein_3790 | ISAs1 family transposase ISEc1 | Transposase |
| JMW03_RS19355 () | 3966167..3966616 | - | 450 | WP_000978828.1 | hypothetical protein | - |
| JMW03_RS19360 () | 3966628..3970884 | - | 4257 | WP_074520242.1 | Protein RhsD | VF |
| JMW03_RS19365 () | 3970960..3973101 | - | 2142 | WP_000103355.1 | type VI secretion system tip protein VgrG | - |
| JMW03_RS19370 () | 3973311..3973829 | - | 519 | WP_001142958.1 | Hcp family type VI secretion system effector | - |
| JMW03_RS19375 () | 3974523..3975023 | + | 501 | WP_000037397.1 | type VI secretion system contractile sheath small subunit | - |
| JMW03_RS19380 () | 3975058..3975282 | + | 225 | WP_000123970.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|