MGE detailed information
MGE type: Conjugative plasmid MGE length: 95130 bp
Accession: NZ_LR890272 Location: 1..95130 Organism: Escherichia coli isolate MINF_7C-sc-2280452 Replicon: plasmid 3
Accession: NZ_LR890272 Location: 1..95130 Organism: Escherichia coli isolate MINF_7C-sc-2280452 Replicon: plasmid 3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW01_RS24685 () | 46..1077 | + | 1032 | WP_000907861.1 | replication initiation protein | - |
| JMW01_RS24690 () | 1775..1942 | + | 168 | WP_201511037.1 | hypothetical protein | - |
| JMW01_RS24695 () | 1985..2269 | + | 285 | WP_001178089.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JMW01_RS24700 () | 2269..2544 | + | 276 | WP_001582571.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JMW01_RS24705 () | 2650..2928 | + | 279 | WP_001105069.1 | hypothetical protein | - |
| JMW01_RS24710 () | 3123..3389 | - | 267 | WP_000627829.1 | hypothetical protein | - |
| JMW01_RS24715 () | 3389..3883 | - | 495 | WP_001582574.1 | hypothetical protein | - |
| JMW01_RS24720 () | 3939..4541 | - | 603 | WP_000517695.1 | hypothetical protein | - |
| JMW01_RS24725 () | 4895..6310 | + | 1416 | WP_029397060.1 | hypothetical protein | - |
| JMW01_RS24730 () | 6234..7460 | - | 1227 | Protein_9 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMW01_RS24735 () | 7455..8465 | - | 1011 | Protein_10 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMW01_RS24740 () | 8516..8743 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| JMW01_RS24745 () | 8767..8958 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| JMW01_RS24750 () | 9440..9982 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| JMW01_RS24755 () | 9995..10855 | - | 861 | WP_000557454.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| JMW01_RS24760 () | 10998..11684 | + | 687 | Protein_15 | IS4 family transposase IS10R | Transposase |
| JMW01_RS24765 () | 11738..12442 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMW01_RS24770 () | 12939..14819 | + | 1881 | WP_094308160.1 | colicin | - |
| JMW01_RS24775 () | 14841..15176 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| JMW01_RS24780 () | 15305..15652 | + | 348 | WP_001582578.1 | hypothetical protein | - |
| JMW01_RS24785 () | 15672..16262 | - | 591 | WP_000194572.1 | hypothetical protein | - |
| JMW01_RS24790 () | 16262..16516 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| JMW01_RS24795 () | 17085..17498 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| JMW01_RS24800 () | 17500..18279 | + | 780 | WP_001164201.1 | site-specific integrase | - |
| JMW01_RS24805 () | 18459..19103 | + | 645 | WP_001144036.1 | ParA family protein | - |
| JMW01_RS24810 () | 19190..19498 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| JMW01_RS24815 () | 19911..20891 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| JMW01_RS24820 () | 20884..21300 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| JMW01_RS24825 () | 21302..22576 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| JMW01_RS24830 () | 22576..23013 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JMW01_RS24835 () | 23010..23258 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JMW01_RS24840 () | 23676..24578 | + | 903 | WP_064670763.1 | DUF1281 domain-containing protein | - |
| JMW01_RS24845 () | 24575..24887 | + | 313 | Protein_32 | hypothetical protein | - |
| JMW01_RS24850 () | 24963..25646 | + | 684 | WP_001401756.1 | DNA methylase | - |
| JMW01_RS24855 () | 25647..25868 | + | 222 | WP_001104871.1 | hypothetical protein | - |
| JMW01_RS24860 () | 25762..26316 | + | 555 | WP_077635412.1 | DUF1380 family protein | - |
| JMW01_RS24865 () | 26361..27136 | + | 776 | Protein_36 | hypothetical protein | - |
| JMW01_RS24870 () | 27674..27976 | + | 303 | WP_001666994.1 | antirestriction protein | - |
| JMW01_RS24875 () | 28023..28445 | + | 423 | WP_013307864.1 | DUF1380 family protein | - |
| JMW01_RS24880 () | 28442..28633 | + | 192 | WP_001703906.1 | hypothetical protein | - |
| JMW01_RS24885 () | 28966..29034 | - | 69 | Protein_40 | pilus protein | - |
| JMW01_RS24890 () | 29403..29930 | + | 528 | WP_001760699.1 | single-stranded DNA-binding protein | - |
| JMW01_RS24895 () | 29988..30221 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| JMW01_RS24900 () | 30280..32238 | + | 1959 | WP_064670764.1 | ParB/RepB/Spo0J family partition protein | - |
| JMW01_RS24905 () | 32293..32727 | + | 435 | WP_001578018.1 | conjugation system SOS inhibitor PsiB | - |
| JMW01_RS24910 () | 32724..33443 | + | 720 | WP_001276268.1 | plasmid SOS inhibition protein A | - |
| JMW01_RS24915 () | 33440..34036 | + | 597 | WP_001401763.1 | hypothetical protein | - |
| JMW01_RS24920 () | 34498..34998 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| JMW01_RS24925 () | 35138..35533 | - | 396 | WP_162886172.1 | hypothetical protein | - |
| JMW01_RS24930 () | 35731..36165 | + | 435 | WP_000218862.1 | hypothetical protein | - |
| JMW01_RS24935 () | 36258..36524 | + | 267 | WP_001247860.1 | hypothetical protein | - |
| JMW01_RS24940 () | 36701..37090 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| JMW01_RS24945 () | 37087..38001 | + | 915 | WP_000038334.1 | ISNCY family transposase ISRor2 | VF |
| JMW01_RS24950 () | 38001..38246 | + | 246 | WP_180496387.1 | hypothetical protein | - |
| JMW01_RS24955 () | 38277..38528 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| JMW01_RS24960 () | 39108..39956 | + | 849 | WP_199397367.1 | DUF4942 domain-containing protein | - |
| JMW01_RS24965 () | 40042..40377 | - | 336 | WP_000157090.1 | hypothetical protein | - |
| JMW01_RS24970 () | 40611..40943 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| JMW01_RS24975 () | 40954..43653 | + | 2700 | WP_001405892.1 | hypothetical protein | Relaxase |
| JMW01_RS24980 () | 43690..45981 | - | 2292 | WP_001289282.1 | hypothetical protein | - |
| JMW01_RS24985 () | 45974..47044 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| JMW01_RS24990 () | 47063..48271 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - () | 48451..48508 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 48451..48508 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 48451..48508 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - () | 48451..48508 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| JMW01_RS24995 () | 48563..48715 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| JMW01_RS25000 () | 48787..49038 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| JMW01_RS25005 () | 49697..49873 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| JMW01_RS25010 () | 50265..50474 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| JMW01_RS25015 () | 50546..51196 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JMW01_RS25020 () | 51270..53438 | - | 2169 | WP_201511036.1 | DotA/TraY family protein | - |
| JMW01_RS25025 () | 53535..54119 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| JMW01_RS25030 () | 54148..55350 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| JMW01_RS25035 () | 55317..55931 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| JMW01_RS25040 () | 55931..58975 | - | 3045 | WP_001024776.1 | IncI1-type conjugal transfer protein TraU | - |
| JMW01_RS25045 () | 59065..59865 | - | 801 | WP_001164792.1 | IncI1-type conjugal transfer protein TraT | - |
| JMW01_RS25050 () | 59849..60037 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| JMW01_RS25055 () | 60101..60505 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| JMW01_RS25060 () | 60556..61083 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| JMW01_RS25065 () | 61083..61787 | - | 705 | WP_023155244.1 | IncI1-type conjugal transfer protein TraP | - |
| JMW01_RS25070 () | 61787..63076 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| JMW01_RS25075 () | 63079..64062 | - | 984 | WP_001191883.1 | hypothetical protein | VF |
| JMW01_RS25080 () | 64073..64765 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| JMW01_RS25085 () | 64762..65109 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| JMW01_RS25090 () | 65127..68894 | - | 3768 | WP_006855639.1 | DNA primase SogL | - |
| JMW01_RS25095 () | 68984..69535 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| JMW01_RS25100 () | 69550..69840 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| JMW01_RS25105 () | 69837..70985 | - | 1149 | WP_001024976.1 | putative protein YggR | VF |
| JMW01_RS25110 () | 70982..71800 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| JMW01_RS25115 () | 71797..72255 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| JMW01_RS25120 () | 72650..73234 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| JMW01_RS25125 () | 73294..74496 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| JMW01_RS25130 () | 74582..75406 | - | 825 | WP_001545755.1 | hypothetical protein | - |
| JMW01_RS25135 () | 75557..76711 | - | 1155 | WP_001139958.1 | integrase | - |
| JMW01_RS25140 () | 78030..78278 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| JMW01_RS25145 () | 78275..78529 | - | 255 | WP_171904539.1 | prepilin | - |
| JMW01_RS25150 () | 78783..79883 | - | 1101 | Protein_93 | hypothetical protein | VF |
| JMW01_RS25155 () | 79871..80527 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| JMW01_RS25160 () | 80512..81072 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| JMW01_RS25165 () | 81082..81696 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| JMW01_RS25170 () | 81713..82798 | - | 1086 | WP_001208802.1 | hypothetical protein | VF |
| JMW01_RS25175 () | 82811..84364 | - | 1554 | WP_000362206.1 | hypothetical protein | VF |
| JMW01_RS25180 () | 84375..84827 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| JMW01_RS25185 () | 84814..86109 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| JMW01_RS25190 () | 86102..87784 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| JMW01_RS25195 () | 87798..88235 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| JMW01_RS25200 () | 88235..89302 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| JMW01_RS25205 () | 90221..90517 | - | 297 | WP_000494780.1 | hypothetical protein | - |
| JMW01_RS25210 () | 90684..90938 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| JMW01_RS25215 () | 91100..91651 | - | 552 | WP_000744646.1 | hypothetical protein | - |
| JMW01_RS25220 () | 91824..92507 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| JMW01_RS25225 () | 92760..93293 | - | 534 | WP_001306770.1 | transcription termination factor NusG | - |
| JMW01_RS25230 () | 93735..94022 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| JMW01_RS25235 () | 93940..94203 | - | 264 | WP_001324596.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|