MGE detailed information
MGE type: Conjugative plasmid MGE length: 118421 bp
Accession: NZ_LR890271 Location: 1..118421 Organism: Escherichia coli isolate MINF_7C-sc-2280452 Replicon: plasmid 2
Accession: NZ_LR890271 Location: 1..118421 Organism: Escherichia coli isolate MINF_7C-sc-2280452 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMW01_RS23985 () | 139..954 | - | 816 | WP_000018329.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| JMW01_RS23990 () | 1105..1809 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMW01_RS23995 () | 1973..2530 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| JMW01_RS24000 () | 2694..5147 | + | 2454 | Protein_3 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMW01_RS24005 () | 5212..5916 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMW01_RS24010 () | 5970..7018 | - | 1049 | Protein_5 | IS3 family transposase ISKpn11 | Transposase |
| JMW01_RS24015 () | 7110..7652 | - | 543 | WP_002063889.1 | AAA family ATPase | - |
| JMW01_RS24020 () | 7665..8525 | - | 861 | WP_000557452.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| JMW01_RS24025 () | 8632..9336 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMW01_RS24030 () | 9402..9947 | + | 546 | Protein_9 | Tn3 family transposase TnpA_Tn3 | Transposase |
| JMW01_RS24035 () | 9983..10398 | - | 416 | Protein_10 | IS1 family transposase | - |
| JMW01_RS24040 () | 10647..11048 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| JMW01_RS24045 () | 10981..11238 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| JMW01_RS24050 () | 11331..11984 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| JMW01_RS24055 () | 12082..12222 | - | 141 | WP_001333237.1 | hypothetical protein | - |
| JMW01_RS24060 () | 12924..13781 | - | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| JMW01_RS24065 () | 13774..13848 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| JMW01_RS24070 () | 14074..14334 | - | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| JMW01_RS24075 () | 14573..15146 | - | 574 | Protein_18 | DUF2726 domain-containing protein | - |
| JMW01_RS24080 () | 15184..15393 | - | 210 | WP_001333231.1 | hemolysin expression modulator Hha | - |
| JMW01_RS24085 () | 15439..15900 | - | 462 | WP_001233871.1 | thermonuclease family protein | - |
| JMW01_RS24090 () | 16143..16355 | - | 213 | WP_012311405.1 | hypothetical protein | - |
| JMW01_RS24095 () | 16493..17053 | - | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| JMW01_RS24100 () | 17108..17854 | - | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| JMW01_RS24105 () | 17874..23144 | - | 5271 | WP_000986979.1 | Multifunctional conjugation protein TraI | Relaxase |
| JMW01_RS24110 () | 23144..25315 | - | 2172 | WP_000009362.1 | type IV conjugative transfer system coupling protein TraD | - |
| JMW01_RS24115 () | 25568..26299 | - | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| JMW01_RS24120 () | 26331..26834 | - | 504 | WP_000605510.1 | hypothetical protein | - |
| JMW01_RS24125 () | 26849..29671 | - | 2823 | WP_001007026.1 | conjugal transfer mating pair stabilization protein TraG | - |
| JMW01_RS24130 () | 29668..31041 | - | 1374 | WP_001137358.1 | conjugal transfer protein TraH | - |
| JMW01_RS24135 () | 31041..31403 | - | 363 | WP_001443292.1 | P-type conjugative transfer protein TrbJ | - |
| JMW01_RS24140 () | 31333..31878 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| JMW01_RS24145 () | 31865..32149 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JMW01_RS24150 () | 32268..32615 | - | 348 | WP_001287893.1 | conjugal transfer protein TrbA | - |
| JMW01_RS24155 () | 32631..33374 | - | 744 | WP_001030378.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| JMW01_RS24160 () | 33367..33624 | - | 258 | WP_000864325.1 | conjugal transfer protein TrbE | - |
| JMW01_RS24165 () | 33651..35459 | - | 1809 | WP_000821821.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| JMW01_RS24170 () | 35456..36094 | - | 639 | WP_001104248.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| JMW01_RS24175 () | 36122..36574 | - | 453 | WP_000069427.1 | hypothetical protein | - |
| JMW01_RS24180 () | 36604..37065 | - | 462 | WP_000277845.1 | hypothetical protein | - |
| JMW01_RS24185 () | 37091..38083 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
| JMW01_RS24190 () | 38080..38712 | - | 633 | WP_001203745.1 | type-F conjugative transfer system protein TraW | - |
| JMW01_RS24195 () | 38709..39095 | - | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| JMW01_RS24200 () | 39092..41719 | - | 2628 | WP_001064268.1 | type IV secretion system protein TraC | - |
| JMW01_RS24205 () | 41879..42100 | - | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| JMW01_RS24210 () | 42235..42750 | - | 516 | WP_000809906.1 | type IV conjugative transfer system lipoprotein TraV | - |
| JMW01_RS24215 () | 42747..42998 | - | 252 | WP_001038341.1 | conjugal transfer protein TrbG | - |
| JMW01_RS24220 () | 42995..43312 | - | 318 | WP_001057292.1 | conjugal transfer protein TrbD | - |
| JMW01_RS24225 () | 43309..43881 | - | 573 | WP_000002780.1 | conjugal transfer protein TraP | - |
| JMW01_RS24230 () | 43871..45298 | - | 1428 | WP_000146685.1 | conjugal transfer protein TraB | - |
| JMW01_RS24235 () | 45298..46002 | - | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| JMW01_RS24240 () | 46013..46579 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| JMW01_RS24245 () | 46601..46912 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| JMW01_RS24250 () | 46927..47286 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| JMW01_RS24255 () | 47320..47547 | - | 228 | WP_001254386.1 | conjugal transfer relaxosome protein TraY | - |
| JMW01_RS24260 () | 47641..48327 | - | 687 | WP_000332484.1 | PAS domain-containing protein | - |
| JMW01_RS24265 () | 48518..48901 | - | 384 | WP_000124981.1 | relaxosome protein TraM | - |
| JMW01_RS24270 () | 49178..49825 | + | 648 | WP_000614936.1 | hypothetical protein | VF |
| JMW01_RS24275 () | 50122..50943 | - | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| JMW01_RS24280 () | 51065..51352 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| JMW01_RS24285 () | 51377..51583 | - | 207 | WP_000547939.1 | hypothetical protein | - |
| JMW01_RS24290 () | 52274..52432 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 52476..52700 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 52476..52700 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 52476..52700 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 52476..52700 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| JMW01_RS24295 () | 52512..52700 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| JMW01_RS24300 () | 52712..53431 | - | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| JMW01_RS24305 () | 53428..53862 | - | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| JMW01_RS24310 () | 53917..55875 | - | 1959 | WP_001145469.1 | ParB/RepB/Spo0J family partition protein | - |
| JMW01_RS24315 () | 55934..56167 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| JMW01_RS24320 () | 56223..56750 | - | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| JMW01_RS24325 () | 57641..58204 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| JMW01_RS24330 () | 58250..59611 | - | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| JMW01_RS24335 () | 59663..59893 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| JMW01_RS24340 () | 60571..60899 | + | 329 | Protein_71 | pilus assembly protein | - |
| JMW01_RS24345 () | 60887..61069 | - | 183 | WP_001027505.1 | hypothetical protein | - |
| JMW01_RS24350 () | 61069..61530 | - | 462 | WP_042007484.1 | DUF1380 family protein | - |
| JMW01_RS24355 () | 61530..61832 | - | 303 | WP_072256028.1 | antirestriction protein | - |
| JMW01_RS24360 () | 62357..63328 | + | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
| JMW01_RS24365 () | 63381..64078 | - | 698 | Protein_76 | IS1 family transposase | - |
| JMW01_RS24370 () | 64132..64464 | - | 333 | Protein_77 | hypothetical protein | - |
| JMW01_RS24375 () | 64533..64871 | - | 339 | WP_001513511.1 | hypothetical protein | - |
| JMW01_RS24380 () | 65683..66654 | - | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JMW01_RS24385 () | 66654..67820 | - | 1167 | WP_001238646.1 | hypothetical protein | VF |
| JMW01_RS24390 () | 68120..68817 | - | 698 | Protein_81 | IS1 family transposase | - |
| JMW01_RS24395 () | 68973..70475 | - | 1503 | WP_000715078.1 | hypothetical protein | - |
| JMW01_RS24400 () | 71084..71533 | - | 450 | WP_000238252.1 | hypothetical protein | - |
| JMW01_RS24405 () | 71651..72130 | + | 480 | WP_000190053.1 | hypothetical protein | - |
| JMW01_RS24410 () | 72570..72797 | + | 228 | Protein_85 | malate dehydrogenase | - |
| JMW01_RS24415 () | 72794..72925 | - | 132 | Protein_86 | phosphopyruvate hydratase | - |
| JMW01_RS24420 () | 73414..74271 | - | 858 | WP_000968140.1 | Manganese transport system membrane protein MntB | ARG |
| JMW01_RS24425 () | 74268..75125 | - | 858 | WP_201511034.1 | Manganese transport system membrane protein MntB | ARG |
| JMW01_RS24430 () | 75122..75949 | - | 828 | WP_000983710.1 | Manganese transport system ATP-binding protein MntB | VF |
| JMW01_RS24435 () | 75949..76863 | - | 915 | WP_000949004.1 | putative periplasmic iron-binding protein | VF |
| JMW01_RS24440 () | 77219..77916 | + | 698 | Protein_91 | IS1 family transposase IS1S | Transposase |
| JMW01_RS24445 () | 78096..78609 | - | 514 | Protein_92 | DUF4113 domain-containing protein | - |
| JMW01_RS24450 () | 78670..78774 | - | 105 | Protein_93 | AAA family ATPase | - |
| JMW01_RS24455 () | 78776..79099 | - | 324 | Protein_94 | IS21 family transposase IS21 | Transposase |
| JMW01_RS24460 () | 79348..80561 | + | 1214 | WP_085947772.1 | IS3 family transposase ISCfr6 | Transposase |
| JMW01_RS24465 () | 81106..82083 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| JMW01_RS24470 () | 82368..83108 | - | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| JMW01_RS24475 () | 83229..83417 | - | 189 | WP_014640565.1 | hypothetical protein | - |
| JMW01_RS24480 () | 83791..84693 | - | 903 | WP_001312822.1 | hypothetical protein | VF |
| JMW01_RS24485 () | 84762..85871 | - | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| JMW01_RS24490 () | 86304..87257 | - | 954 | WP_000280980.1 | Protease 7 | VF |
| JMW01_RS24495 () | 88165..88862 | + | 698 | Protein_102 | IS1 family transposase | - |
| JMW01_RS24500 () | 88873..89076 | - | 204 | WP_001259759.1 | colicin V family bacteriocin | - |
| JMW01_RS24505 () | 89054..89290 | - | 237 | WP_014640552.1 | colicin V immunity protein | - |
| JMW01_RS24510 () | 89754..90035 | - | 282 | WP_001105066.1 | hypothetical protein | - |
| JMW01_RS24515 () | 90208..90375 | + | 168 | Protein_106 | colicin-B | - |
| JMW01_RS24520 () | 90393..90920 | - | 528 | WP_000203272.1 | colicin B immunity protein | - |
| JMW01_RS24525 () | 91164..91979 | + | 816 | WP_001312845.1 | lipid II-degrading bacteriocin colicin M | - |
| JMW01_RS24530 () | 92029..92382 | - | 354 | WP_000864812.1 | colicin M immunity protein | - |
| JMW01_RS24535 () | 92560..93351 | - | 792 | WP_000016493.1 | site-specific integrase | - |
| JMW01_RS24540 () | 93348..94037 | - | 690 | WP_000796228.1 | hypothetical protein | - |
| JMW01_RS24545 () | 94081..94431 | - | 351 | WP_000493379.1 | hypothetical protein | - |
| JMW01_RS24550 () | 94976..95221 | + | 246 | Protein_113 | transcriptional regulator | - |
| JMW01_RS24555 () | 95286..95990 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMW01_RS24560 () | 96043..96423 | - | 381 | Protein_115 | NAD(P)H-dependent oxidoreductase | - |
| JMW01_RS24565 () | 96524..96847 | - | 324 | WP_001175594.1 | helix-turn-helix domain-containing protein | - |
| JMW01_RS24570 () | 96952..98031 | + | 1080 | WP_001089727.1 | permease | - |
| JMW01_RS24575 () | 98324..98941 | - | 618 | WP_000521603.1 | hypothetical protein | - |
| JMW01_RS24580 () | 99133..100689 | - | 1557 | WP_000818556.1 | AAA family ATPase | - |
| JMW01_RS24585 () | 100952..101542 | - | 591 | WP_000194575.1 | hypothetical protein | - |
| JMW01_RS24590 () | 101542..101799 | - | 258 | WP_000343085.1 | hypothetical protein | - |
| JMW01_RS24595 () | 102153..104291 | + | 2139 | WP_000350638.1 | AAA family ATPase | - |
| JMW01_RS24600 () | 104453..104869 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| JMW01_RS24605 () | 104866..105096 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| JMW01_RS24610 () | 105392..105682 | + | 291 | WP_000111771.1 | hypothetical protein | - |
| JMW01_RS24615 () | 105672..106571 | + | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| JMW01_RS24620 () | 106621..107160 | - | 540 | Protein_127 | exclusion suppressor FxsA | - |
| JMW01_RS24625 () | 107253..108752 | + | 1500 | WP_000174402.1 | IS21 family transposase ISEc10 | Transposase |
| JMW01_RS24630 () | 108749..109504 | + | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| JMW01_RS24635 () | 109571..111262 | - | 1692 | Protein_130 | NTPase | - |
| JMW01_RS24640 () | 111264..112160 | - | 897 | WP_201511035.1 | transcriptional regulator | - |
| JMW01_RS24645 () | 112166..112870 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| JMW01_RS24650 () | 112936..114450 | + | 1515 | Protein_133 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| JMW01_RS24655 () | 114508..114750 | + | 243 | WP_000844627.1 | transposase | - |
| JMW01_RS24660 () | 114782..115432 | - | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| JMW01_RS24665 () | 115538..116737 | + | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| JMW01_RS24670 () | 116769..117653 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| JMW01_RS24675 () | 117791..118198 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| JMW01_RS24680 () | 118187..118420 | + | 234 | Protein_139 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|