MGE detailed information
MGE type: Genomic_island MGE length: 41802 bp
Accession: NZ_LR883050 Location: 4351010..4392811 Organism: Escherichia coli isolate L1_E925 Replicon: chromosome
Accession: NZ_LR883050 Location: 4351010..4392811 Organism: Escherichia coli isolate L1_E925 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL017_RS21170 () | 4346201..4346305 | + | 105 | Protein_4140 | IS3 family transposase | - |
| JL017_RS21175 () | 4346644..4346901 | + | 258 | WP_000555341.1 | hypothetical protein | - |
| JL017_RS21180 () | 4347221..4347352 | - | 132 | Protein_4142 | IS3 family transposase | - |
| JL017_RS21185 () | 4347634..4348992 | + | 1359 | WP_047648710.1 | esterase-like activity of phytase family protein | - |
| JL017_RS21190 () | 4349231..4350616 | - | 1386 | WP_001763674.1 | IS66 family transposase | - |
| JL017_RS21195 () | 4350666..4351013 | - | 348 | WP_000612632.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| JL017_RS21200 () | 4351010..4351390 | - | 381 | WP_001171523.1 | IS66 family transposase ISEc8 | Transposase |
| JL017_RS21205 () | 4351745..4352179 | - | 435 | Protein_4147 | zinc-ribbon domain-containing protein | - |
| JL017_RS21210 () | 4352167..4352556 | - | 390 | WP_047660830.1 | hypothetical protein | - |
| JL017_RS21215 () | 4352613..4353635 | + | 1023 | WP_001295213.1 | IS21 family transposase IS100kyp | Transposase |
| JL017_RS21220 () | 4353632..4354413 | + | 782 | Protein_4150 | IS21 family transposase IS100 | Transposase |
| JL017_RS21225 () | 4354786..4355355 | - | 570 | WP_000221544.1 | inovirus Gp2 family protein | - |
| JL017_RS21230 () | 4355526..4356203 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS21235 () | 4356203..4356550 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JL017_RS21240 () | 4356570..4358141 | + | 1572 | WP_000381416.1 | IS66 family transposase IS679 | Transposase |
| JL017_RS21245 () | 4358807..4359019 | - | 213 | WP_001395323.1 | hemolysin expression modulator Hha | - |
| JL017_RS21250 () | 4359733..4359939 | + | 207 | WP_000632607.1 | AlpA family transcriptional regulator | - |
| JL017_RS21255 () | 4360026..4360628 | + | 603 | WP_001395325.1 | hypothetical protein | - |
| JL017_RS21260 () | 4361829..4362746 | + | 918 | WP_023143234.1 | hypothetical protein | - |
| JL017_RS21265 () | 4362831..4363703 | + | 873 | WP_001395328.1 | GTPase family protein | - |
| JL017_RS21270 () | 4364076..4366925 | + | 2850 | WP_001395329.1 | calcium-binding autotransporter Cah | - |
| JL017_RS21275 () | 4366996..4367127 | + | 132 | Protein_4161 | DUF905 family protein | - |
| JL017_RS21280 () | 4367201..4367658 | + | 458 | Protein_4162 | hypothetical protein | - |
| JL017_RS21285 () | 4367655..4367888 | + | 234 | WP_001419216.1 | DUF987 family protein | - |
| JL017_RS21290 () | 4367927..4368262 | + | 336 | WP_024169726.1 | type IV toxin-antitoxin system YeeU family antitoxin | - |
| JL017_RS21295 () | 4368344..4368769 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS21300 () | 4368766..4369116 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS21305 () | 4369147..4370760 | + | 1614 | WP_000080193.1 | IS66 family transposase ISEc23 | Transposase |
| JL017_RS21310 () | 4370767..4370904 | + | 138 | WP_106422237.1 | TA system toxin CbtA family protein | - |
| JL017_RS21315 () | 4370897..4371025 | + | 129 | WP_106422236.1 | TA system toxin CbtA family protein | - |
| JL017_RS21320 () | 4371432..4371614 | + | 183 | WP_001394811.1 | hypothetical protein | - |
| JL017_RS21325 () | 4371664..4372836 | + | 1173 | WP_001394812.1 | DNA methylase | - |
| JL017_RS21330 () | 4372844..4374343 | + | 1500 | WP_001397452.1 | DNA methylase | - |
| JL017_RS21335 () | 4374374..4375759 | - | 1386 | WP_001397453.1 | PLD-like domain protein | - |
| JL017_RS21340 () | 4376179..4376352 | - | 174 | Protein_4174 | transposase | - |
| JL017_RS21345 () | 4376351..4376470 | + | 120 | Protein_4175 | AAA family ATPase | - |
| JL017_RS21350 () | 4376520..4377608 | - | 1089 | Protein_4176 | ISL3 family transposase ISEc38 | Transposase |
| JL017_RS21355 () | 4377740..4377850 | + | 111 | Protein_4177 | DUF905 family protein | - |
| JL017_RS21360 () | 4377951..4378769 | + | 819 | WP_001397454.1 | DUF945 domain-containing protein | - |
| JL017_RS21365 () | 4378861..4379346 | + | 486 | WP_001397456.1 | antirestriction protein | - |
| JL017_RS21370 () | 4379362..4379838 | + | 477 | WP_001186709.1 | RadC family protein | - |
| JL017_RS21375 () | 4379925..4380146 | + | 222 | WP_000691818.1 | DUF987 domain-containing protein | - |
| JL017_RS21380 () | 4380226..4380600 | + | 375 | WP_024169686.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JL017_RS21385 () | 4380647..4381024 | + | 378 | WP_001394823.1 | TA system toxin CbtA family protein | Toxin Detail |
| JL017_RS21390 () | 4381021..4381509 | + | 489 | WP_001394824.1 | hypothetical protein | - |
| JL017_RS21395 () | 4381521..4381718 | + | 198 | WP_001394825.1 | DUF957 domain-containing protein | - |
| JL017_RS21400 () | 4381803..4382645 | + | 843 | WP_001394826.1 | DUF4942 domain-containing protein | - |
| JL017_RS21405 () | 4383456..4384994 | + | 1539 | WP_001187173.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| JL017_RS21410 () | 4385359..4386693 | + | 1335 | WP_047648496.1 | cadaverine/lysine antiporter | - |
| JL017_RS21415 () | 4386773..4388920 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JL017_RS21420 () | 4388979..4390436 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| JL017_RS21425 () | 4390673..4392190 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JL017_RS21430 () | 4392314..4392487 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JL017_RS21435 () | 4392515..4392811 | - | 297 | WP_071597404.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JL017_RS21440 () | 4393038..4393310 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JL017_RS21445 () | 4393322..4393552 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| JL017_RS21450 () | 4393733..4395364 | + | 1632 | WP_001216490.1 | sensor histidine kinase | - |
| JL017_RS21455 () | 4395361..4396080 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|