MGE detailed information
MGE type: Conjugative plasmid MGE length: 112055 bp
Accession: NZ_LR882979 Location: 1..112055 Organism: Escherichia coli isolate L3_CS7_E2980 Replicon: plasmid 2
Accession: NZ_LR882979 Location: 1..112055 Organism: Escherichia coli isolate L3_CS7_E2980 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLZ94_RS24195 () | 271..1302 | + | 1032 | WP_003964539.1 | replication initiation protein | - |
| JLZ94_RS24200 () | 2209..2493 | + | 285 | WP_001178087.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| JLZ94_RS24205 () | 2493..2768 | + | 276 | WP_000421259.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| JLZ94_RS24210 () | 3552..4688 | + | 1137 | WP_000465104.1 | hypothetical protein | - |
| JLZ94_RS24215 () | 4685..5890 | + | 1206 | WP_000673444.1 | TolC family protein | - |
| JLZ94_RS24220 () | 5847..6632 | + | 786 | WP_000775193.1 | hypothetical protein | - |
| JLZ94_RS24225 () | 6613..7239 | + | 627 | WP_000620425.1 | ATP-binding cassette domain-containing protein | - |
| JLZ94_RS24230 () | 7602..8686 | - | 1085 | Protein_7 | IS91 family transposase ISEc37 | Transposase |
| JLZ94_RS24235 () | 8883..10045 | + | 1163 | WP_095892534.1 | IS3 family transposase ISEc17 | Transposase |
| JLZ94_RS24240 () | 10073..10312 | - | 240 | WP_000124145.1 | hypothetical protein | - |
| JLZ94_RS24245 () | 11174..12388 | + | 1215 | WP_001106584.1 | hypothetical protein | - |
| JLZ94_RS24250 () | 12457..12804 | - | 348 | Protein_11 | transposase | - |
| JLZ94_RS24255 () | 12893..13279 | + | 387 | Protein_12 | IS21 family transposase IS21 | Transposase |
| JLZ94_RS24260 () | 13648..14052 | + | 405 | WP_001387713.1 | IS3 family transposase ISKpn38 | Transposase |
| JLZ94_RS24265 () | 14292..15296 | - | 1005 | Protein_14 | IS110 family transposase ISSfl8 | Transposase |
| JLZ94_RS24275 () | 16834..17856 | + | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| JLZ94_RS24280 () | 17856..18635 | + | 780 | WP_198321336.1 | IS21 family transposase IS100kyp | Transposase |
| JLZ94_RS24285 () | 18692..18982 | - | 291 | Protein_18 | transposase | - |
| JLZ94_RS24290 () | 19169..19466 | - | 298 | Protein_19 | IS3 family transposase | - |
| JLZ94_RS24295 () | 20245..21405 | + | 1161 | WP_074522431.1 | group II intron reverse transcriptase/maturase | - |
| JLZ94_RS24300 () | 21473..21652 | + | 180 | Protein_21 | transposase domain-containing protein | - |
| JLZ94_RS24305 () | 22076..22279 | - | 204 | WP_071595697.1 | ANR family transcriptional regulator | - |
| JLZ94_RS24310 () | 22489..23292 | + | 804 | WP_000346361.1 | CFA/I fimbrial subunit D | VF |
| JLZ94_RS24315 () | 23444..23683 | + | 240 | Protein_24 | IS5 family transposase ISPan1 | Transposase |
| JLZ94_RS24320 () | 23868..24561 | + | 694 | Protein_25 | IS1 family transposase | - |
| JLZ94_RS24325 () | 24862..25230 | + | 369 | WP_024172958.1 | hypothetical protein | - |
| JLZ94_RS24330 () | 25419..26531 | - | 1113 | WP_001386351.1 | IS4 family transposase IS421 | Transposase |
| JLZ94_RS24335 () | 26847..27707 | - | 861 | WP_000588735.1 | Right origin-binding protein | VF |
| JLZ94_RS24340 () | 28001..28678 | + | 678 | WP_000933134.1 | IS481 family transposase ISEc18 | Transposase |
| JLZ94_RS24345 () | 28680..29000 | - | 321 | WP_000762577.1 | hypothetical protein | - |
| JLZ94_RS24350 () | 29119..29466 | + | 348 | WP_000142439.1 | hypothetical protein | - |
| JLZ94_RS24355 () | 29486..30076 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| JLZ94_RS24360 () | 30076..30333 | - | 258 | WP_000371891.1 | hypothetical protein | - |
| JLZ94_RS24365 () | 30887..31237 | + | 351 | WP_000493398.1 | hypothetical protein | - |
| JLZ94_RS24370 () | 31281..31970 | + | 690 | WP_000796228.1 | hypothetical protein | - |
| JLZ94_RS24375 () | 31967..32758 | + | 792 | WP_000016491.1 | site-specific integrase | - |
| JLZ94_RS24380 () | 32896..33171 | - | 276 | WP_000239529.1 | hypothetical protein | - |
| JLZ94_RS24385 () | 33165..33809 | - | 645 | WP_000633910.1 | AAA family ATPase | - |
| JLZ94_RS24390 () | 34038..35009 | + | 972 | WP_001103690.1 | hypothetical protein | - |
| JLZ94_RS24395 () | 35014..35406 | + | 393 | WP_000340829.1 | plasmid partitioning/stability family protein | - |
| JLZ94_RS24400 () | 35411..36682 | - | 1272 | WP_000457531.1 | Y-family DNA polymerase | - |
| JLZ94_RS24405 () | 36682..37119 | - | 438 | WP_000109061.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| JLZ94_RS24410 () | 37116..37364 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| JLZ94_RS24415 () | 38390..40114 | + | 1725 | WP_001385964.1 | group II intron reverse transcriptase/maturase | - |
| JLZ94_RS24420 () | 40191..41093 | + | 903 | WP_000273912.1 | DUF1281 domain-containing protein | - |
| JLZ94_RS24425 () | 41090..41401 | + | 312 | WP_014640311.1 | hypothetical protein | - |
| JLZ94_RS24430 () | 41466..42149 | + | 684 | WP_000086150.1 | DNA methylase | - |
| JLZ94_RS24435 () | 42150..42371 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| JLZ94_RS24440 () | 42385..42819 | + | 435 | WP_000274500.1 | DUF1380 family protein | - |
| JLZ94_RS24445 () | 42865..43641 | + | 777 | WP_001005028.1 | hypothetical protein | - |
| JLZ94_RS24450 () | 44055..44555 | + | 501 | WP_000117626.1 | antirestriction protein ArdA | - |
| JLZ94_RS24455 () | 45284..45718 | + | 435 | WP_000218856.1 | hypothetical protein | - |
| JLZ94_RS24460 () | 45812..46078 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| JLZ94_RS24465 () | 46143..47057 | + | 915 | WP_001385909.1 | ISNCY family transposase ISRor2 | VF |
| JLZ94_RS24470 () | 47057..47302 | + | 246 | WP_001260884.1 | hypothetical protein | - |
| JLZ94_RS24475 () | 47333..47584 | - | 252 | WP_000148286.1 | helix-turn-helix domain-containing protein | - |
| JLZ94_RS24480 () | 47618..47815 | - | 198 | WP_001385910.1 | hypothetical protein | - |
| JLZ94_RS24485 () | 48164..49012 | + | 849 | WP_001385911.1 | DUF4942 domain-containing protein | - |
| JLZ94_RS24490 () | 49098..49433 | - | 336 | WP_001385912.1 | hypothetical protein | - |
| JLZ94_RS24495 () | 49667..49999 | + | 333 | WP_001283951.1 | IncI1-type relaxosome accessory protein NikA | - |
| JLZ94_RS24500 () | 50010..52712 | + | 2703 | WP_024168170.1 | hypothetical protein | Relaxase |
| JLZ94_RS24505 () | 52835..53653 | + | 819 | WP_000106195.1 | DUF2971 domain-containing protein | - |
| JLZ94_RS24510 () | 53726..56017 | - | 2292 | WP_024172021.1 | hypothetical protein | - |
| JLZ94_RS24515 () | 56010..57080 | - | 1071 | WP_000151586.1 | IncI1-type conjugal transfer protein TrbB | - |
| JLZ94_RS24520 () | 57099..58307 | - | 1209 | WP_001388819.1 | IncI1-type conjugal transfer protein TrbA | - |
| JLZ94_RS24525 () | 58524..59510 | - | 987 | WP_200999713.1 | hypothetical protein | - |
| - () | 59671..59726 | - | 56 | NuclAT_1 | - | - |
| - () | 59671..59726 | - | 56 | NuclAT_1 | - | - |
| - () | 59671..59726 | - | 56 | NuclAT_1 | - | - |
| - () | 59671..59726 | - | 56 | NuclAT_1 | - | - |
| - () | 59967..60029 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59967..60029 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59967..60029 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - () | 59967..60029 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| JLZ94_RS24530 () | 60079..60231 | + | 153 | WP_001704300.1 | Hok/Gef family protein | Toxin Detail |
| JLZ94_RS24535 () | 60303..60554 | - | 252 | WP_001291963.1 | hypothetical protein | - |
| JLZ94_RS24540 () | 60854..61150 | + | 297 | WP_001275298.1 | hypothetical protein | - |
| JLZ94_RS24545 () | 61215..61391 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| JLZ94_RS24550 () | 61600..61809 | - | 210 | WP_000416064.1 | hemolysin expression modulator Hha | - |
| JLZ94_RS24555 () | 61907..62505 | - | 599 | Protein_72 | plasmid IncI1-type surface exclusion protein ExcA | - |
| JLZ94_RS24560 () | 62581..64749 | - | 2169 | WP_001388820.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| JLZ94_RS24565 () | 64846..65430 | - | 585 | WP_001037993.1 | IncI1-type conjugal transfer protein TraX | - |
| JLZ94_RS24570 () | 65459..66661 | - | 1203 | WP_001388821.1 | IncI1-type conjugal transfer protein TraW | - |
| JLZ94_RS24575 () | 66628..66771 | - | 144 | Protein_76 | conjugal transfer protein TraV | - |
| JLZ94_RS24580 () | 66802..68373 | - | 1572 | WP_024190699.1 | IS66 family transposase IS679 | Transposase |
| JLZ94_RS24585 () | 68393..68740 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ94_RS24590 () | 68740..69390 | - | 651 | WP_000993931.1 | IS66 family transposase IS679 | Transposase |
| JLZ94_RS24595 () | 69477..71609 | + | 2133 | Protein_80 | type IV conjugative transfer system coupling protein TraD | - |
| JLZ94_RS24600 () | 71609..76880 | + | 5272 | Protein_81 | Multifunctional conjugation protein TraI | Relaxase |
| JLZ94_RS24605 () | 76929..77171 | + | 243 | WP_000451343.1 | hypothetical protein | - |
| JLZ94_RS24610 () | 77178..77480 | + | 303 | Protein_83 | IS3 family transposase ISEc31 | Transposase |
| JLZ94_RS24615 () | 77548..78699 | + | 1152 | WP_001254932.1 | IS30 family transposase IS30D | Transposase |
| JLZ94_RS24620 () | 78710..79612 | + | 903 | Protein_85 | IS3 family transposase ISCfr6 | Transposase |
| JLZ94_RS24625 () | 79624..79857 | - | 234 | Protein_86 | IS3 family transposase | - |
| JLZ94_RS24630 () | 79892..80671 | - | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JLZ94_RS24635 () | 80671..81693 | - | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| JLZ94_RS24640 () | 81777..82037 | + | 261 | Protein_89 | PilN family type IVB pilus formation outer membrane protein | - |
| JLZ94_RS24645 () | 82030..83325 | + | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| JLZ94_RS24650 () | 83312..83764 | + | 453 | WP_001247870.1 | hypothetical protein | VF |
| JLZ94_RS24655 () | 83775..84035 | + | 261 | WP_000362205.1 | hypothetical protein | - |
| JLZ94_RS24660 () | 84111..84491 | + | 381 | WP_016241213.1 | IS66 family transposase ISEc8 | Transposase |
| JLZ94_RS24665 () | 84488..84835 | + | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| JLZ94_RS24670 () | 84884..86422 | + | 1539 | WP_000099207.1 | IS66 family transposase ISEc22 | Transposase |
| JLZ94_RS24675 () | 86881..88419 | - | 1539 | WP_000099207.1 | IS66 family transposase ISEc22 | Transposase |
| JLZ94_RS24680 () | 88468..88815 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| JLZ94_RS24685 () | 88812..89192 | - | 381 | WP_016241213.1 | IS66 family transposase ISEc8 | Transposase |
| JLZ94_RS24690 () | 89283..90032 | + | 750 | Protein_99 | IS91 family transposase ISSbo1 | Transposase |
| JLZ94_RS24695 () | 90428..91039 | + | 612 | WP_000727989.1 | CS5 fimbrial subunit | VF |
| JLZ94_RS24700 () | 91097..91768 | + | 672 | WP_000699814.1 | hypothetical protein | - |
| JLZ94_RS24705 () | 91765..94212 | + | 2448 | WP_001390943.1 | TcfC E-set like domain-containing protein | - |
| JLZ94_RS24710 () | 94228..94839 | + | 612 | WP_000694253.1 | hypothetical protein | - |
| JLZ94_RS24715 () | 95345..95530 | + | 186 | WP_001703699.1 | hypothetical protein | - |
| JLZ94_RS24720 () | 95527..96645 | + | 1119 | WP_001390944.1 | hypothetical protein | - |
| JLZ94_RS24725 () | 96765..97052 | + | 288 | Protein_106 | IS3 family transposase ISSfl10 | Transposase |
| JLZ94_RS24730 () | 97281..98045 | - | 765 | WP_000905948.1 | hypothetical protein | - |
| JLZ94_RS24735 () | 98058..98264 | - | 207 | WP_001702528.1 | hypothetical protein | - |
| JLZ94_RS24740 () | 98331..99544 | + | 1214 | WP_187531548.1 | IS3 family transposase IS629 | Transposase |
| JLZ94_RS24745 () | 99588..100310 | + | 723 | Protein_110 | IS3 family transposase ISSd1 | Transposase |
| JLZ94_RS24750 () | 100631..101005 | - | 375 | WP_024167121.1 | Heat-labile enterotoxin B chain | VF |
| JLZ94_RS24755 () | 101002..101778 | - | 777 | WP_001378495.1 | Heat-labile enterotoxin A chain | VF |
| JLZ94_RS24760 () | 102272..102681 | + | 410 | Protein_113 | IS3 family transposase IS629 | Transposase |
| JLZ94_RS24765 () | 102781..103803 | + | 1023 | WP_001356151.1 | IS21 family transposase IS100kyp | Transposase |
| JLZ94_RS24770 () | 103803..104582 | + | 780 | WP_001297096.1 | IS21 family transposase IS100kyp | Transposase |
| JLZ94_RS24775 () | 104633..106078 | - | 1446 | WP_001388809.1 | hypothetical protein | VF |
| JLZ94_RS24780 () | 106092..106529 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| JLZ94_RS24785 () | 106529..107597 | - | 1069 | Protein_118 | type IV pilus biogenesis lipoprotein PilL | - |
| JLZ94_RS24790 () | 108218..108505 | - | 288 | WP_000465829.1 | hypothetical protein | - |
| JLZ94_RS24795 () | 108548..108802 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| JLZ94_RS24800 () | 108974..109657 | - | 684 | WP_000213855.1 | hypothetical protein | - |
| JLZ94_RS24805 () | 109911..110444 | - | 534 | WP_001712498.1 | transcription termination factor nusG family protein | - |
| JLZ94_RS24810 () | 110886..111173 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| JLZ94_RS24815 () | 111091..111354 | - | 264 | WP_024167927.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|