MGE detailed information
MGE type: Conjugative plasmid MGE length: 86517 bp
Accession: NZ_LR882974 Location: 1..86517 Organism: Escherichia coli isolate L2_E1649 Replicon: plasmid 2
Accession: NZ_LR882974 Location: 1..86517 Organism: Escherichia coli isolate L2_E1649 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLZ81_RS22940 () | 1..978 | + | 978 | WP_000361613.1 | RepB family plasmid replication initiator protein | - |
| JLZ81_RS22945 () | 1221..1961 | - | 741 | WP_001066944.1 | tyrosine-type recombinase/integrase | - |
| JLZ81_RS22950 () | 2082..2210 | - | 129 | WP_032164396.1 | hypothetical protein | - |
| JLZ81_RS22955 () | 3173..3478 | + | 306 | WP_000336590.1 | Major pilu subunit operon regulatory protein PapB | VF |
| JLZ81_RS22960 () | 3730..4626 | + | 897 | WP_001695115.1 | transcriptional regulator HilD | - |
| JLZ81_RS22965 () | 4640..5083 | + | 444 | WP_001220546.1 | hypothetical protein | VF |
| JLZ81_RS22970 () | 5382..6092 | + | 711 | WP_113705914.1 | hypothetical protein | VF |
| JLZ81_RS22975 () | 6155..7726 | + | 1572 | WP_001759776.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| JLZ81_RS22980 () | 7745..8158 | + | 414 | WP_001201934.1 | TcpQ domain-containing protein | - |
| JLZ81_RS22985 () | 8176..9633 | + | 1458 | WP_000768353.1 | hypothetical protein | - |
| JLZ81_RS22990 () | 9636..10196 | + | 561 | WP_001047585.1 | hypothetical protein | - |
| JLZ81_RS22995 () | 10198..11025 | + | 828 | WP_032328082.1 | hypothetical protein | - |
| JLZ81_RS23000 () | 11013..11498 | + | 486 | WP_000336151.1 | hypothetical protein | - |
| JLZ81_RS23005 () | 11696..13030 | + | 1335 | WP_001380305.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| JLZ81_RS23010 () | 13014..14039 | + | 1026 | WP_001759772.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| JLZ81_RS23015 () | 14054..15175 | + | 1122 | WP_000857355.1 | hypothetical protein | - |
| JLZ81_RS23020 () | 15178..16032 | + | 855 | WP_000289148.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| JLZ81_RS23025 () | 17051..18279 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| JLZ81_RS23030 () | 18482..18892 | - | 411 | Protein_18 | Tn3 family transposase ISEc63 | Transposase |
| JLZ81_RS23035 () | 19101..19247 | + | 147 | Protein_19 | IS30 family transposase | - |
| JLZ81_RS23040 () | 19583..19966 | - | 384 | WP_200986833.1 | hypothetical protein | - |
| JLZ81_RS23045 () | 20565..21164 | - | 600 | WP_032302271.1 | proQ/FINO family protein | - |
| JLZ81_RS23050 () | 21378..21563 | + | 186 | Protein_22 | transposase domain-containing protein | - |
| JLZ81_RS23060 () | 23258..23416 | - | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 23481..23675 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 23481..23675 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 23481..23675 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 23481..23675 | - | 195 | NuclAT_0 | - | Antitoxin Detail |
| JLZ81_RS23065 () | 23687..24406 | - | 720 | WP_001276221.1 | plasmid SOS inhibition protein A | - |
| JLZ81_RS23070 () | 24403..24837 | - | 435 | WP_000845924.1 | conjugation system SOS inhibitor PsiB | - |
| JLZ81_RS23075 () | 24892..26190 | - | 1299 | Protein_27 | hypothetical protein | - |
| JLZ81_RS23080 () | 26189..27025 | + | 837 | Protein_28 | IS91 family transposase IS91 | Transposase |
| JLZ81_RS23085 () | 27302..27667 | + | 366 | WP_000124102.1 | hypothetical protein | - |
| JLZ81_RS23090 () | 27652..27795 | + | 144 | Protein_30 | IS91 family transposase | - |
| JLZ81_RS23095 () | 27982..28595 | - | 614 | Protein_31 | IS3 family transposase IS2 | Transposase |
| JLZ81_RS23100 () | 28752..29933 | - | 1182 | WP_001467544.1 | DUF3800 domain-containing protein | - |
| JLZ81_RS23105 () | 30191..30778 | + | 588 | Protein_33 | IS91 family transposase ISSbo1 | Transposase |
| JLZ81_RS23110 () | 30929..31108 | - | 180 | WP_032231585.1 | hypothetical protein | - |
| JLZ81_RS23115 () | 31811..32668 | - | 858 | WP_000130964.1 | incFII family plasmid replication initiator RepA | - |
| JLZ81_RS23120 () | 32661..32735 | - | 75 | WP_001365571.1 | RepA leader peptide Tap | - |
| JLZ81_RS23125 () | 32958..33218 | - | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| JLZ81_RS23130 () | 33502..33708 | - | 207 | WP_032186826.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 33700..33756 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| - () | 33700..33756 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| - () | 33700..33756 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| - () | 33700..33756 | + | 57 | NuclAT_2 | - | Antitoxin Detail |
| JLZ81_RS23135 () | 34000..34182 | + | 183 | WP_001705320.1 | hypothetical protein | - |
| JLZ81_RS23140 () | 34407..34820 | - | 414 | WP_077625677.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| JLZ81_RS23145 () | 35483..36934 | - | 1452 | Protein_41 | hypothetical protein | Relaxase |
| JLZ81_RS23150 () | 36934..37185 | - | 252 | Protein_42 | conjugal transfer protein TraK | - |
| JLZ81_RS23155 () | 37175..37738 | - | 564 | WP_000406020.1 | type IV conjugative transfer system protein TraE | - |
| JLZ81_RS23160 () | 37758..38063 | - | 306 | WP_000016323.1 | type IV conjugative transfer system protein TraL | - |
| JLZ81_RS23165 () | 38065..38424 | - | 360 | WP_001054220.1 | type IV conjugative transfer system pilin TraA | - |
| JLZ81_RS23170 () | 38932..39207 | - | 276 | WP_000234737.1 | hypothetical protein | - |
| JLZ81_RS23175 () | 39423..40120 | + | 698 | Protein_47 | IS1 family transposase | - |
| JLZ81_RS23180 () | 40601..40984 | - | 384 | WP_001137411.1 | relaxosome protein TraM | - |
| JLZ81_RS23185 () | 41295..41645 | + | 351 | WP_001706493.1 | hypothetical protein | VF |
| JLZ81_RS23190 () | 41732..42904 | + | 1173 | WP_000952428.1 | IS21 family transposase ISEc62 | Transposase |
| JLZ81_RS23195 () | 42904..43698 | + | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| JLZ81_RS23200 () | 43771..45303 | + | 1533 | WP_072328008.1 | IS3 family transposase ISKpn38 | Transposase |
| JLZ81_RS23205 () | 45364..45696 | + | 333 | Protein_53 | hypothetical protein | VF |
| JLZ81_RS23210 () | 46073..46750 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ81_RS23215 () | 46750..47097 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ81_RS23220 () | 47117..48688 | + | 1572 | WP_000381401.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ81_RS23225 () | 48715..49521 | - | 807 | WP_001705702.1 | DUF945 domain-containing protein | - |
| JLZ81_RS23230 () | 49632..49928 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| JLZ81_RS23235 () | 50268..50585 | + | 318 | WP_000820288.1 | hypothetical protein | - |
| JLZ81_RS23240 () | 50823..51002 | - | 180 | WP_200986835.1 | type I toxin-antitoxin system Hok family toxin | - |
| JLZ81_RS23245 () | 51072..51470 | + | 399 | Protein_61 | IS1 family transposase IS1X2 | Transposase |
| JLZ81_RS23250 () | 51951..52334 | - | 384 | WP_001137411.1 | relaxosome protein TraM | - |
| JLZ81_RS23255 () | 52667..52993 | + | 327 | WP_001705323.1 | hypothetical protein | VF |
| JLZ81_RS23260 () | 53080..54252 | + | 1173 | WP_000952428.1 | IS21 family transposase ISEc62 | Transposase |
| JLZ81_RS23265 () | 54252..55046 | + | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| JLZ81_RS23270 () | 55119..56651 | + | 1533 | WP_072328008.1 | IS3 family transposase ISKpn38 | Transposase |
| JLZ81_RS23275 () | 56712..57044 | + | 333 | Protein_67 | hypothetical protein | VF |
| JLZ81_RS23280 () | 57421..58098 | + | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ81_RS23285 () | 58098..58445 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ81_RS23290 () | 58465..60036 | + | 1572 | WP_000381401.1 | IS66 family transposase ISCro1 | Transposase |
| JLZ81_RS23295 () | 60063..60869 | - | 807 | WP_001705702.1 | DUF945 domain-containing protein | - |
| JLZ81_RS23300 () | 60980..61276 | - | 297 | WP_001272251.1 | hypothetical protein | - |
| JLZ81_RS23305 () | 61616..61933 | + | 318 | WP_000820288.1 | hypothetical protein | - |
| JLZ81_RS23310 () | 62171..62332 | - | 162 | WP_000775238.1 | type I toxin-antitoxin system Hok family toxin | - |
| - () | 62398..62532 | - | 135 | NuclAT_1 | - | - |
| - () | 62398..62532 | - | 135 | NuclAT_1 | - | - |
| - () | 62398..62532 | - | 135 | NuclAT_1 | - | - |
| - () | 62398..62532 | - | 135 | NuclAT_1 | - | - |
| JLZ81_RS23315 () | 62508..63026 | - | 519 | WP_001178556.1 | hypothetical protein | - |
| JLZ81_RS23320 () | 63026..64702 | - | 1677 | WP_052158500.1 | plasmid SOS inhibition protein A | - |
| JLZ81_RS23325 () | 64766..64999 | - | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| JLZ81_RS23330 () | 65056..65583 | - | 528 | WP_000290820.1 | single-stranded DNA-binding protein | - |
| JLZ81_RS23335 () | 65885..66317 | + | 433 | Protein_79 | hypothetical protein | - |
| JLZ81_RS23340 () | 66403..66966 | - | 564 | WP_001297832.1 | class I SAM-dependent methyltransferase | - |
| JLZ81_RS23345 () | 67013..68374 | - | 1362 | WP_000170687.1 | DUF3560 domain-containing protein | - |
| JLZ81_RS23350 () | 68426..68656 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| JLZ81_RS23355 () | 69257..69592 | + | 336 | WP_041031721.1 | hypothetical protein | - |
| JLZ81_RS23360 () | 69571..69762 | - | 192 | WP_001024838.1 | hypothetical protein | - |
| JLZ81_RS23365 () | 69759..70544 | - | 786 | WP_000086139.1 | DUF1380 family protein | - |
| JLZ81_RS23370 () | 71241..71729 | - | 489 | Protein_86 | IS110 family transposase ISShdy1 | Transposase |
| JLZ81_RS23375 () | 71761..72500 | + | 740 | Protein_87 | IS3 family transposase IS1203 | Transposase |
| JLZ81_RS23380 () | 73173..74681 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| JLZ81_RS23385 () | 74771..75244 | + | 474 | Protein_89 | IS3 family transposase IS629 | Transposase |
| JLZ81_RS23390 () | 75283..75840 | - | 558 | Protein_90 | IS110 family transposase ISShdy1 | Transposase |
| JLZ81_RS23395 () | 75938..76180 | - | 243 | WP_072328081.1 | hypothetical protein | - |
| JLZ81_RS23400 () | 76177..77079 | - | 903 | WP_001365320.1 | DUF1281 domain-containing protein | - |
| JLZ81_RS23405 () | 77688..78659 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| JLZ81_RS23410 () | 78659..79825 | - | 1167 | WP_000772446.1 | hypothetical protein | VF |
| JLZ81_RS23420 () | 81632..82411 | + | 780 | Protein_96 | IS66 family transposase ISSgsp1 | Transposase |
| JLZ81_RS23425 () | 82555..82722 | - | 168 | Protein_97 | IS3 family transposase | - |
| JLZ81_RS23430 () | 82781..84313 | - | 1533 | WP_072328008.1 | IS3 family transposase ISKpn38 | Transposase |
| JLZ81_RS23435 () | 84358..84537 | - | 180 | Protein_99 | IS3 family transposase | - |
| JLZ81_RS23440 () | 84547..85697 | - | 1151 | Protein_100 | IS30 family transposase IS30D | Transposase |
| JLZ81_RS23445 () | 85765..86067 | - | 303 | Protein_101 | IS3 family transposase ISEc31 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|