MGE detailed information
MGE type: Genomic_island MGE length: 9232 bp
Accession: NZ_LR882973 Location: 4247266..4256497 Organism: Escherichia coli isolate L2_E1649 Replicon: chromosome
Accession: NZ_LR882973 Location: 4247266..4256497 Organism: Escherichia coli isolate L2_E1649 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JLZ81_RS20770 () | 4242458..4243990 | - | 1533 | WP_072328008.1 | IS3 family transposase | - |
| JLZ81_RS20775 () | 4244041..4245612 | + | 1572 | WP_032328013.1 | IS66 family transposase | - |
| JLZ81_RS20780 () | 4246103..4246633 | + | 531 | WP_000778605.1 | hypothetical protein | - |
| JLZ81_RS20785 () | 4247266..4248282 | - | 1017 | WP_001310555.1 | IS5 family transposase IS5D | Transposase |
| JLZ81_RS20790 () | 4248315..4248680 | + | 366 | Protein_4066 | transcriptional regulator | - |
| JLZ81_RS20795 () | 4249045..4250379 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| JLZ81_RS20800 () | 4250459..4252606 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| JLZ81_RS20805 () | 4252665..4254122 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| JLZ81_RS20810 () | 4254359..4255876 | + | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| JLZ81_RS20815 () | 4256000..4256173 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| JLZ81_RS20820 () | 4256201..4256497 | - | 297 | WP_071597404.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| JLZ81_RS20825 () | 4256724..4256996 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| JLZ81_RS20830 () | 4257008..4257238 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| JLZ81_RS20835 () | 4257419..4259050 | + | 1632 | WP_001216490.1 | sensor histidine kinase | - |
| JLZ81_RS20840 () | 4259047..4259766 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.008 |