MGE detailed information
MGE type: Prophage MGE length: 8911 bp
Accession: NZ_LR882500 Location: 2975414..2984324 Organism: Mycobacterium tuberculosis variant microti strain 94-2272 isolate human Replicon: chromosome
Accession: NZ_LR882500 Location: 2975414..2984324 Organism: Mycobacterium tuberculosis variant microti strain 94-2272 isolate human Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JOA04_RS13755 () | 2970802..2971260 | + | 459 | WP_003413675.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| JOA04_RS13760 () | 2971396..2971776 | + | 381 | WP_003899407.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| JOA04_RS13765 () | 2971773..2973269 | + | 1497 | WP_003413686.1 | ACR3 family arsenite efflux transporter | - |
| JOA04_RS13770 () | 2973504..2973695 | + | 192 | WP_003912823.1 | antitoxin MazE family protein | - |
| JOA04_RS13775 () | 2973697..2974018 | + | 322 | Protein_2721 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| JOA04_RS13800 () | 2974986..2975417 | + | 432 | WP_003899409.1 | hypothetical protein | - |
| JOA04_RS13805 () | 2975414..2976412 | + | 999 | WP_105799867.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| JOA04_RS13810 () | 2976426..2976890 | + | 465 | WP_003900539.1 | ParB N-terminal domain-containing protein | - |
| JOA04_RS13815 () | 2976878..2977129 | + | 252 | WP_003908028.1 | hypothetical protein | - |
| JOA04_RS13820 () | 2977300..2978737 | - | 1438 | Protein_2726 | phage major capsid protein | - |
| JOA04_RS13825 () | 2978745..2979278 | - | 534 | WP_003899412.1 | HK97 family phage prohead protease | - |
| JOA04_RS13830 () | 2979431..2979922 | - | 492 | WP_003900541.1 | phage terminase small subunit P27 family | - |
| JOA04_RS13835 () | 2980089..2980412 | - | 324 | WP_003909715.1 | type II toxin-antitoxin system toxin | Toxin Detail |
| JOA04_RS13840 () | 2980492..2980737 | - | 246 | WP_003899415.1 | type II toxin-antitoxin system antitoxin | Antitoxin Detail |
| JOA04_RS13845 () | 2980734..2982164 | - | 1431 | WP_202582051.1 | DUF3631 domain-containing protein | - |
| JOA04_RS13850 () | 2982166..2982558 | - | 393 | WP_003899417.1 | DUF2742 domain-containing protein | - |
| JOA04_RS13855 () | 2982555..2982815 | - | 261 | WP_003899418.1 | helix-turn-helix domain-containing protein | - |
| JOA04_RS13860 () | 2982832..2983194 | - | 363 | WP_003900543.1 | hypothetical protein | - |
| JOA04_RS13865 () | 2983197..2984324 | - | 1128 | WP_202586493.1 | Putative prophage phiRv2 integrase ; Integrase | Integrase |
| JOA04_RS13870 () | 2984469..2984696 | - | 228 | WP_003899421.1 | hypothetical protein | - |
| JOA04_RS13875 () | 2984693..2985082 | - | 390 | WP_003899422.1 | hypothetical protein | - |
| JOA04_RS13880 () | 2984988..2985260 | + | 273 | WP_003900544.1 | hypothetical protein | - |
| JOA04_RS13885 () | 2985359..2985592 | + | 234 | WP_003413717.1 | hypothetical protein | - |
| JOA04_RS13890 () | 2985603..2985857 | + | 255 | WP_003413719.1 | hypothetical protein | - |
| JOA04_RS13895 () | 2986205..2986486 | + | 282 | WP_003899423.1 | hypothetical protein | - |
| JOA04_RS13900 () | 2986577..2987359 | + | 783 | Protein_2742 | IS256-like element IS1081 family transposase | - |
| JOA04_RS13905 () | 2987402..2988160 | + | 759 | WP_003413845.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| JOA04_RS13910 () | 2988239..2988760 | + | 522 | WP_003413846.1 | hypothetical protein | - |
| JOA04_RS13915 () | 2988789..2989259 | + | 471 | WP_003413852.1 | N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA120 | NC_000962 | 2970551..2980818 | 0.004 |