MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 42660 bp
Accession: NZ_LR882061 Location: 1..42660 Organism: Escherichia coli isolate 2014-01-7375 Replicon: plasmid 5
Accession: NZ_LR882061 Location: 1..42660 Organism: Escherichia coli isolate 2014-01-7375 Replicon: plasmid 5
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHP09_RS25300 () | 1..858 | + | 858 | WP_191536384.1 | incFII family plasmid replication initiator RepA | - |
| IHP09_RS25305 () | 1558..1698 | + | 141 | WP_161710125.1 | hypothetical protein | - |
| IHP09_RS25310 () | 1857..2186 | + | 330 | WP_000493287.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IHP09_RS25315 () | 2167..2448 | + | 282 | WP_000780220.1 | helix-turn-helix transcriptional regulator | - |
| IHP09_RS25320 () | 2516..3814 | - | 1299 | Protein_5 | Tn3 family transposase TnpA_Tn3 | Transposase |
| IHP09_RS25325 () | 3882..4586 | + | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IHP09_RS25330 () | 4641..5000 | - | 360 | Protein_7 | class A beta-lactamase | - |
| IHP09_RS25335 () | 5212..5916 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| IHP09_RS25340 () | 6155..6376 | + | 222 | WP_001280990.1 | hypothetical protein | - |
| IHP09_RS25345 () | 6392..7417 | + | 1026 | WP_001420096.1 | hypothetical protein | - |
| IHP09_RS25350 () | 7832..8182 | - | 351 | WP_000361384.1 | plasmid partitioning/stability family protein | - |
| IHP09_RS25355 () | 8185..9147 | - | 963 | WP_000959880.1 | plasmid segregation protein ParM | - |
| IHP09_RS25360 () | 9294..9587 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| IHP09_RS25365 () | 9664..10347 | + | 684 | WP_000085940.1 | DNA methylase | - |
| IHP09_RS25370 () | 10348..10569 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| IHP09_RS25375 () | 10583..11017 | + | 435 | WP_000274486.1 | DUF1380 family protein | - |
| IHP09_RS25380 () | 11062..11832 | + | 771 | WP_001006200.1 | hypothetical protein | - |
| IHP09_RS25385 () | 12368..12670 | + | 303 | WP_001671341.1 | antirestriction protein | - |
| IHP09_RS25390 () | 12717..13139 | + | 423 | WP_000271682.1 | DUF1380 family protein | - |
| IHP09_RS25395 () | 13136..13327 | + | 192 | WP_001027501.1 | hypothetical protein | - |
| IHP09_RS25400 () | 14366..14596 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| IHP09_RS25405 () | 14648..16009 | + | 1362 | WP_000170715.1 | DUF3560 domain-containing protein | - |
| IHP09_RS25410 () | 16057..16620 | + | 564 | WP_001470147.1 | class I SAM-dependent methyltransferase | - |
| IHP09_RS25415 () | 16912..17178 | - | 267 | WP_071531731.1 | hypothetical protein | - |
| IHP09_RS25420 () | 17248..17454 | + | 207 | WP_000547944.1 | hypothetical protein | - |
| IHP09_RS25425 () | 17480..18013 | + | 534 | WP_000290815.1 | single-stranded DNA-binding protein | - |
| IHP09_RS25430 () | 18070..18303 | + | 234 | WP_000006030.1 | DUF905 family protein | - |
| IHP09_RS25435 () | 18368..20332 | + | 1965 | WP_000117208.1 | ParB/RepB/Spo0J family partition protein | - |
| IHP09_RS25440 () | 20401..20835 | + | 435 | WP_000845894.1 | conjugation system SOS inhibitor PsiB | - |
| IHP09_RS25445 () | 20832..21551 | + | 720 | WP_000116352.1 | plasmid SOS inhibition protein A | - |
| - () | 21563..21787 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21563..21787 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21563..21787 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 21563..21787 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| IHP09_RS25450 () | 21831..21989 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IHP09_RS25455 () | 22911..23198 | + | 288 | WP_000107540.1 | hypothetical protein | - |
| IHP09_RS25460 () | 23317..24138 | + | 822 | WP_001234451.1 | DUF945 domain-containing protein | - |
| IHP09_RS25465 () | 24417..24869 | - | 453 | WP_001469955.1 | transglycosylase SLT domain-containing protein | - |
| IHP09_RS25470 () | 25347..25730 | + | 384 | WP_001137956.1 | hypothetical protein | - |
| IHP09_RS25475 () | 25912..26649 | + | 738 | WP_000818288.1 | hypothetical protein | - |
| IHP09_RS25480 () | 26738..26905 | + | 168 | Protein_37 | TraY domain-containing protein | - |
| IHP09_RS25490 () | 28585..28956 | + | 372 | WP_000829554.1 | conjugal transfer protein TraA | - |
| IHP09_RS25495 () | 28975..29274 | + | 300 | WP_001204091.1 | type IV conjugative transfer system protein TraL | - |
| IHP09_RS25500 () | 29285..29863 | + | 579 | WP_000365869.1 | type IV conjugative transfer system protein TraE | - |
| IHP09_RS25505 () | 29838..30617 | + | 780 | WP_001227817.1 | type-F conjugative transfer system secretin TraK | - |
| IHP09_RS25510 () | 30610..31944 | + | 1335 | WP_001284177.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| IHP09_RS25515 () | 31956..32468 | + | 513 | WP_000699800.1 | type IV conjugative transfer system lipoprotein TraV | - |
| IHP09_RS25520 () | 32465..35104 | + | 2640 | WP_000085830.1 | type IV secretion system protein TraC | - |
| IHP09_RS25525 () | 35083..38070 | + | 2988 | WP_191536382.1 | Multifunctional conjugation protein TraI | Relaxase |
| IHP09_RS25530 () | 38070..38291 | + | 222 | WP_000412083.1 | hypothetical protein | - |
| IHP09_RS25535 () | 38299..39048 | + | 750 | WP_000123038.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| IHP09_RS25540 () | 39122..39682 | + | 561 | WP_000139377.1 | fertility inhibition protein FinO | - |
| IHP09_RS25545 () | 39836..40030 | - | 195 | WP_001115778.1 | hypothetical protein | - |
| IHP09_RS25550 () | 40394..40993 | + | 600 | WP_000256073.1 | hypothetical protein | - |
| - () | 41580..41638 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| - () | 41580..41638 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| - () | 41580..41638 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| - () | 41580..41638 | - | 59 | NuclAT_1 | - | Antitoxin Detail |
| IHP09_RS25555 () | 41685..41834 | + | 150 | WP_001312851.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| IHP09_RS25560 () | 42102..42356 | + | 255 | WP_000083830.1 | replication regulatory protein RepA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|