MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NZ_LR882057 Location: 4505244..4514595 Organism: Escherichia coli isolate 2014-01-7375 Replicon: chromosome
Accession: NZ_LR882057 Location: 4505244..4514595 Organism: Escherichia coli isolate 2014-01-7375 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHP09_RS21790 () | 4500405..4501706 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| IHP09_RS21795 () | 4501822..4502160 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| IHP09_RS21800 () | 4502136..4503833 | + | 1698 | WP_000068932.1 | protein-disulfide reductase DsbD | - |
| IHP09_RS21805 () | 4503870..4504445 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| IHP09_RS21815 () | 4505244..4506782 | + | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| IHP09_RS21820 () | 4507148..4508482 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| IHP09_RS21825 () | 4508562..4510709 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| IHP09_RS21830 () | 4510768..4512225 | + | 1458 | WP_000856832.1 | dipeptide/tripeptide permease DtpC | - |
| IHP09_RS21835 () | 4512462..4513979 | + | 1518 | WP_001295087.1 | lysine--tRNA ligase | - |
| IHP09_RS21840 () | 4514098..4514271 | - | 174 | WP_121865734.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| IHP09_RS21845 () | 4514299..4514595 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| IHP09_RS21850 () | 4514822..4515094 | - | 273 | WP_000405647.1 | N-acetyltransferase | - |
| IHP09_RS21855 () | 4515106..4515336 | - | 231 | WP_000371698.1 | (4Fe-4S)-binding protein | - |
| IHP09_RS21860 () | 4515517..4517148 | + | 1632 | WP_001216487.1 | sensor histidine kinase | - |
| IHP09_RS21865 () | 4517145..4517864 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.007 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.007 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.007 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.007 |