MGE detailed information
MGE type: Prophage MGE length: 72460 bp
Accession: NZ_LR882057 Location: 3870955..3943414 Organism: Escherichia coli isolate 2014-01-7375 Replicon: chromosome
Accession: NZ_LR882057 Location: 3870955..3943414 Organism: Escherichia coli isolate 2014-01-7375 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IHP09_RS18695 () | 3866232..3867089 | - | 858 | WP_000621018.1 | helix-turn-helix domain-containing protein | - |
| IHP09_RS18700 () | 3867338..3868207 | + | 870 | WP_001299025.1 | aldo/keto reductase | - |
| IHP09_RS18705 () | 3868367..3868960 | - | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| IHP09_RS18710 () | 3868972..3869208 | - | 237 | WP_000474077.1 | DUF1471 domain-containing protein | - |
| IHP09_RS18715 () | 3869317..3870642 | - | 1326 | WP_001046293.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| IHP09_RS18725 () | 3872327..3873793 | - | 1467 | WP_000723923.1 | hypothetical protein | - |
| IHP09_RS18730 () | 3874109..3874528 | - | 420 | WP_001333214.1 | hypothetical protein | - |
| IHP09_RS18735 () | 3874844..3875194 | - | 351 | Protein_3669 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IHP09_RS18745 () | 3876454..3876660 | - | 207 | Protein_3671 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| IHP09_RS18750 () | 3876690..3877193 | + | 504 | WP_001115596.1 | phage tail protein | - |
| IHP09_RS18755 () | 3877193..3877786 | + | 594 | WP_021529449.1 | tail fiber assembly protein | - |
| IHP09_RS18760 () | 3877758..3878186 | - | 429 | WP_000289818.1 | tail fiber assembly protein | - |
| IHP09_RS18765 () | 3878188..3878820 | - | 633 | WP_021529776.1 | hypothetical protein | - |
| IHP09_RS18770 () | 3878929..3879243 | - | 315 | WP_000145930.1 | hypothetical protein | - |
| IHP09_RS18775 () | 3879240..3879941 | - | 702 | WP_000788893.1 | hypothetical protein | - |
| IHP09_RS18780 () | 3879938..3880837 | - | 900 | WP_000185505.1 | replication protein | - |
| IHP09_RS18785 () | 3880870..3881163 | - | 294 | WP_000251075.1 | lambda phage CII family protein | - |
| IHP09_RS18790 () | 3881283..3881498 | - | 216 | WP_000067727.1 | helix-turn-helix transcriptional regulator | - |
| IHP09_RS18795 () | 3881574..3882269 | + | 696 | WP_096216393.1 | LexA family transcriptional regulator | - |
| IHP09_RS18800 () | 3882496..3883341 | + | 846 | WP_032146231.1 | hypothetical protein | - |
| IHP09_RS18805 () | 3883656..3883988 | + | 333 | WP_021529434.1 | antitermination protein N | - |
| IHP09_RS18810 () | 3883997..3884134 | + | 138 | WP_000915090.1 | hypothetical protein | - |
| IHP09_RS18815 () | 3884259..3884438 | + | 180 | WP_000213971.1 | antirestriction Ral family protein | - |
| IHP09_RS18820 () | 3884642..3885010 | + | 369 | WP_000065374.1 | DUF2528 family protein | - |
| IHP09_RS18825 () | 3885083..3885247 | + | 165 | WP_001198861.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| IHP09_RS18830 () | 3885216..3885359 | + | 144 | WP_000372937.1 | host cell division inhibitory peptide Kil | - |
| IHP09_RS18835 () | 3885434..3885730 | + | 297 | WP_000995468.1 | host-nuclease inhibitor protein Gam | - |
| IHP09_RS18840 () | 3885736..3886521 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| IHP09_RS18845 () | 3886518..3887198 | + | 681 | WP_000186811.1 | YqaJ viral recombinase family protein | - |
| IHP09_RS18850 () | 3887195..3887356 | + | 162 | WP_000682319.1 | DUF1317 family protein | - |
| IHP09_RS18855 () | 3887349..3887906 | + | 558 | WP_000129285.1 | phage N-6-adenine-methyltransferase | - |
| IHP09_RS18860 () | 3887983..3888198 | + | 216 | WP_000188870.1 | hypothetical protein | - |
| IHP09_RS18865 () | 3888297..3888515 | + | 219 | WP_000763368.1 | TraR/DksA family transcriptional regulator | - |
| IHP09_RS18870 () | 3888563..3888841 | + | 279 | WP_000488407.1 | DUF4222 domain-containing protein | - |
| IHP09_RS18875 () | 3889040..3890203 | + | 1164 | WP_000051903.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| IHP09_RS18880 () | 3890429..3891748 | + | 1320 | WP_000144688.1 | Prophage integrase IntA ; Integrase | Integrase |
| IHP09_RS18885 () | 3891841..3892689 | - | 849 | WP_134888717.1 | DUF4942 domain-containing protein | - |
| IHP09_RS18890 () | 3892786..3892983 | - | 198 | WP_000772024.1 | DUF957 domain-containing protein | - |
| IHP09_RS18895 () | 3893003..3893491 | - | 489 | WP_032215286.1 | hypothetical protein | - |
| IHP09_RS18900 () | 3893488..3893865 | - | 378 | WP_079399123.1 | type IV toxin-antitoxin system toxin CbtA | Toxin Detail |
| IHP09_RS18905 () | 3893954..3894322 | - | 369 | WP_191536357.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| IHP09_RS18910 () | 3894401..3894622 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| IHP09_RS18915 () | 3894685..3895161 | - | 477 | WP_001186773.1 | RadC family protein | - |
| IHP09_RS18920 () | 3895177..3895662 | - | 486 | WP_134888779.1 | antirestriction protein | - |
| IHP09_RS18925 () | 3895717..3896535 | - | 819 | WP_191536140.1 | DUF945 domain-containing protein | - |
| IHP09_RS18930 () | 3896635..3896868 | - | 234 | WP_001119729.1 | DUF905 family protein | - |
| IHP09_RS18935 () | 3896947..3897402 | - | 456 | WP_000581504.1 | hypothetical protein | - |
| IHP09_RS18940 () | 3897478..3899994 | - | 2517 | WP_001348608.1 | hypothetical protein | - |
| IHP09_RS18945 () | 3900115..3902961 | - | 2847 | WP_191536142.1 | Ag43/Cah family autotransporter adhesin | - |
| IHP09_RS18950 () | 3903334..3904206 | - | 873 | WP_112023337.1 | GTPase family protein | - |
| IHP09_RS18955 () | 3904634..3906331 | + | 1698 | WP_059337598.1 | ATP-binding protein | - |
| IHP09_RS18960 () | 3906381..3907199 | - | 819 | Protein_3714 | IS110 family transposase ISEc20 | Transposase |
| IHP09_RS18965 () | 3907274..3908394 | + | 1121 | WP_134888769.1 | IS3 family transposase ISRaq1 | Transposase |
| IHP09_RS18970 () | 3909142..3909945 | - | 804 | Protein_3716 | DUF2971 domain-containing protein | - |
| IHP09_RS18975 () | 3910988..3911227 | + | 240 | WP_024224214.1 | hypothetical protein | - |
| IHP09_RS18980 () | 3911267..3913705 | + | 2439 | WP_032180025.1 | type I restriction-modification system subunit M | - |
| IHP09_RS18985 () | 3913717..3915060 | + | 1344 | WP_134888771.1 | restriction endonuclease subunit S | - |
| IHP09_RS18990 () | 3915073..3915729 | + | 657 | WP_000312833.1 | DUF4433 domain-containing protein | Toxin Detail |
| IHP09_RS18995 () | 3915726..3916793 | + | 1068 | WP_000634203.1 | macro domain-containing protein | Antitoxin Detail |
| IHP09_RS19000 () | 3916812..3919907 | + | 3096 | WP_059337602.1 | HsdR family type I site-specific deoxyribonuclease | - |
| IHP09_RS19005 () | 3919907..3920623 | + | 717 | WP_001122107.1 | M48 family metallopeptidase | - |
| IHP09_RS19010 () | 3921477..3921731 | - | 255 | WP_001222075.1 | hypothetical protein | - |
| IHP09_RS19015 () | 3921728..3926737 | - | 5010 | Protein_3725 | hemagglutinin repeat-containing protein | - |
| IHP09_RS19020 () | 3926737..3927411 | - | 675 | Protein_3726 | Hemolysin transporter protein ShlB | VF |
| IHP09_RS19025 () | 3928091..3928282 | + | 192 | WP_001487912.1 | DUF4222 domain-containing protein | - |
| IHP09_RS19030 () | 3928557..3928817 | + | 261 | Protein_3728 | IS3 family transposase ISSfl10 | Transposase |
| IHP09_RS19035 () | 3928882..3930033 | + | 1152 | WP_024176232.1 | IS30 family transposase IS30D | Transposase |
| IHP09_RS19040 () | 3930040..3930936 | + | 897 | Protein_3730 | IS3 family transposase ISSd1 | Transposase |
| IHP09_RS19045 () | 3930979..3931404 | - | 426 | Protein_3731 | DEAD/DEAH box helicase family protein | - |
| IHP09_RS19050 () | 3931594..3932339 | + | 746 | Protein_3732 | ISL3 family transposase ISEc38 | Transposase |
| IHP09_RS19055 () | 3932565..3934985 | + | 2421 | WP_059337608.1 | NTPase | - |
| IHP09_RS19060 () | 3935287..3935850 | - | 564 | WP_134888714.1 | inovirus-type Gp2 protein | - |
| IHP09_RS19065 () | 3936607..3937835 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| IHP09_RS19070 () | 3938161..3939594 | - | 1434 | WP_021519321.1 | DUF3987 domain-containing protein | - |
| IHP09_RS19075 () | 3939843..3940070 | - | 228 | WP_000120392.1 | DUF3987 domain-containing protein | - |
| IHP09_RS19080 () | 3940176..3940403 | - | 228 | WP_000266639.1 | AlpA family phage regulatory protein | - |
| IHP09_RS19085 () | 3941094..3942731 | + | 1638 | WP_059337584.1 | hypothetical protein | - |
| IHP09_RS19090 () | 3942818..3943414 | - | 597 | WP_001384291.1 | hypothetical protein | - |
| IHP09_RS19100 () | 3943915..3945168 | - | 1254 | WP_000893255.1 | glutamate-5-semialdehyde dehydrogenase | - |
| IHP09_RS19105 () | 3945180..3946283 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| IHP09_RS19110 () | 3946571..3947626 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| IHP09_RS19115 () | 3947665..3948066 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|