MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93927 bp
Accession: NZ_LR881464 Location: 1..93927 Organism: Salmonella enterica subsp. enterica serovar Typhimurium isolate S.Tm LT2p22_assembled Replicon: plasmid 2_Linear-
Accession: NZ_LR881464 Location: 1..93927 Organism: Salmonella enterica subsp. enterica serovar Typhimurium isolate S.Tm LT2p22_assembled Replicon: plasmid 2_Linear-
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STMLT2P22_RS23775 () | 94..732 | - | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| STMLT2P22_RS23780 () | 717..1025 | - | 309 | WP_010999945.1 | hypothetical protein | - |
| STMLT2P22_RS23785 () | 1044..2036 | - | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| STMLT2P22_RS23790 () | 2033..2665 | - | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| STMLT2P22_RS23795 () | 2662..3048 | - | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| STMLT2P22_RS23800 () | 3023..5671 | - | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| STMLT2P22_RS23805 () | 5687..5950 | - | 264 | WP_001239256.1 | hypothetical protein | - |
| STMLT2P22_RS23810 () | 6067..6534 | - | 468 | WP_000549562.1 | hypothetical protein | - |
| STMLT2P22_RS23815 () | 6527..6748 | - | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| STMLT2P22_RS23820 () | 6883..7398 | - | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| STMLT2P22_RS23825 () | 7395..7640 | - | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| STMLT2P22_RS23830 () | 7618..8214 | - | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| STMLT2P22_RS23835 () | 8204..9625 | - | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| STMLT2P22_RS23840 () | 9625..10365 | - | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| STMLT2P22_RS23845 () | 10352..10918 | - | 567 | WP_000399769.1 | type IV conjugative transfer system protein TraE | - |
| STMLT2P22_RS23850 () | 10940..11251 | - | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| STMLT2P22_RS23855 () | 11266..11628 | - | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| STMLT2P22_RS23860 () | 11670..11897 | - | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| STMLT2P22_RS23865 () | 11991..12677 | - | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| STMLT2P22_RS23870 () | 12870..13250 | - | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| STMLT2P22_RS23875 () | 13665..14135 | + | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| STMLT2P22_RS23880 () | 14446..15264 | - | 819 | Protein_21 | DUF945 domain-containing protein | - |
| STMLT2P22_RS23885 () | 15367..15525 | - | 159 | WP_001704449.1 | hypothetical protein | - |
| STMLT2P22_RS23890 () | 15774..16511 | - | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| STMLT2P22_RS23895 () | 16508..16942 | - | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| STMLT2P22_RS23900 () | 16982..18979 | - | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| STMLT2P22_RS23905 () | 19048..19290 | - | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| STMLT2P22_RS23910 () | 19345..19863 | - | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| STMLT2P22_RS23915 () | 20457..20612 | - | 156 | WP_001526868.1 | hypothetical protein | - |
| STMLT2P22_RS23920 () | 20576..20899 | - | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| STMLT2P22_RS23925 () | 21135..21569 | - | 435 | WP_000274533.1 | DUF1380 family protein | - |
| STMLT2P22_RS23930 () | 21636..22070 | - | 435 | WP_001200150.1 | antirestriction protein | - |
| STMLT2P22_RS23935 () | 22566..23330 | - | 765 | WP_001246548.1 | membrane protein | - |
| STMLT2P22_RS23940 () | 23402..23815 | - | 414 | WP_000990114.1 | DUF1380 family protein | - |
| STMLT2P22_RS23945 () | 23871..24092 | - | 222 | WP_001109588.1 | hypothetical protein | - |
| STMLT2P22_RS23950 () | 24092..24772 | - | 681 | WP_000088645.1 | DNA methylase | - |
| STMLT2P22_RS23955 () | 25154..25510 | - | 357 | WP_000369839.1 | hypothetical protein | - |
| STMLT2P22_RS23960 () | 25503..25973 | - | 471 | WP_000490265.1 | hypothetical protein | - |
| STMLT2P22_RS23965 () | 26484..26906 | + | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| STMLT2P22_RS23970 () | 26906..28180 | + | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| STMLT2P22_RS23975 () | 28262..29236 | - | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| STMLT2P22_RS23980 () | 29236..30441 | - | 1206 | WP_000427676.1 | AAA family ATPase | - |
| STMLT2P22_RS23985 () | 30856..31797 | + | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| STMLT2P22_RS23990 () | 31829..32395 | - | 567 | WP_001541562.1 | DUF2913 family protein | - |
| STMLT2P22_RS23995 () | 32452..32787 | - | 336 | WP_001527010.1 | hypothetical protein | - |
| STMLT2P22_RS24000 () | 32971..33387 | - | 417 | WP_001541564.1 | hypothetical protein | - |
| STMLT2P22_RS24005 () | 33473..34588 | - | 1116 | WP_001247118.1 | DNA-binding protein | - |
| STMLT2P22_RS24010 () | 34847..35335 | + | 489 | WP_001135407.1 | hypothetical protein | - |
| STMLT2P22_RS24015 () | 35990..36730 | + | 741 | WP_001541566.1 | carbonic anhydrase | - |
| STMLT2P22_RS24020 () | 36937..37497 | + | 561 | WP_001240331.1 | recombinase family protein | - |
| STMLT2P22_RS24025 () | 37481..39145 | + | 1665 | WP_000098783.1 | IS481 family transposase | - |
| STMLT2P22_RS24030 () | 39078..40103 | + | 1026 | WP_001576625.1 | ExeA family protein | - |
| STMLT2P22_RS24035 () | 40292..41329 | - | 1038 | WP_001121399.1 | IS630 family transposase | - |
| STMLT2P22_RS24040 () | 41938..42831 | + | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| STMLT2P22_RS24045 () | 43005..43169 | + | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| STMLT2P22_RS24050 () | 43343..44110 | + | 768 | WP_001526990.1 | virulence protein SpvA | - |
| STMLT2P22_RS24055 () | 44073..44240 | + | 168 | WP_001526987.1 | hypothetical protein | - |
| STMLT2P22_RS24060 () | 44292..46067 | + | 1776 | WP_001676648.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| STMLT2P22_RS24065 () | 46349..47074 | + | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| STMLT2P22_RS24070 () | 47335..47985 | + | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| STMLT2P22_RS24075 () | 48112..48536 | - | 425 | Protein_60 | IS200/IS605 family transposase | - |
| STMLT2P22_RS24080 () | 48593..48943 | + | 351 | WP_001541541.1 | helix-turn-helix domain-containing protein | - |
| STMLT2P22_RS24085 () | 49010..49570 | - | 561 | WP_000900095.1 | inverse autotransporter beta domain-containing protein | - |
| STMLT2P22_RS24090 () | 49726..50013 | + | 288 | WP_071530243.1 | hypothetical protein | - |
| STMLT2P22_RS24095 () | 50290..50775 | - | 486 | WP_000905606.1 | membrane protein | - |
| STMLT2P22_RS24100 () | 50769..51278 | - | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| STMLT2P22_RS24105 () | 51282..51995 | - | 714 | Protein_66 | EAL domain-containing protein | - |
| STMLT2P22_RS24110 () | 52004..52786 | - | 783 | WP_000082169.1 | site-specific integrase | - |
| STMLT2P22_RS24115 () | 52821..53342 | - | 522 | WP_000198608.1 | hypothetical protein | - |
| STMLT2P22_RS24120 () | 53339..53629 | - | 291 | WP_001266176.1 | hypothetical protein | - |
| STMLT2P22_RS24125 () | 53631..53936 | - | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| STMLT2P22_RS24130 () | 53938..54156 | - | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| STMLT2P22_RS24135 () | 54832..55353 | + | 522 | WP_010999942.1 | hypothetical protein | - |
| STMLT2P22_RS24140 () | 55837..56133 | + | 297 | WP_001687482.1 | hypothetical protein | - |
| STMLT2P22_RS24145 () | 56627..57616 | + | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
| STMLT2P22_RS24150 () | 57875..58319 | - | 445 | Protein_75 | site-specific integrase | - |
| STMLT2P22_RS24155 () | 58488..58869 | - | 382 | Protein_76 | YgiW/YdeI family stress tolerance OB fold protein | - |
| STMLT2P22_RS24160 () | 59588..59890 | + | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| STMLT2P22_RS24165 () | 60165..60683 | + | 519 | WP_000748205.1 | major pilin PefA | - |
| STMLT2P22_RS24170 () | 60911..63319 | + | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| STMLT2P22_RS24175 () | 63312..64004 | + | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| STMLT2P22_RS24180 () | 64019..64576 | + | 558 | WP_010999940.1 | membrane protein | - |
| STMLT2P22_RS24185 () | 64829..65704 | + | 876 | WP_010999939.1 | membrane protein | - |
| STMLT2P22_RS24190 () | 66136..66348 | + | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| STMLT2P22_RS24195 () | 66333..66683 | + | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| STMLT2P22_RS24200 () | 66928..67581 | + | 654 | WP_000178592.1 | DsbA family protein | - |
| STMLT2P22_RS24205 () | 67571..67717 | + | 147 | WP_001192557.1 | hypothetical protein | - |
| STMLT2P22_RS24210 () | 67714..68613 | + | 900 | WP_010999938.1 | YjiK family protein | - |
| STMLT2P22_RS24215 () | 68703..69260 | + | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| STMLT2P22_RS24220 () | 69527..70285 | + | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| STMLT2P22_RS24225 () | 70382..70603 | - | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| STMLT2P22_RS24230 () | 71463..72344 | - | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| STMLT2P22_RS24235 () | 72325..72402 | - | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| STMLT2P22_RS24240 () | 72652..72918 | - | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| STMLT2P22_RS24245 () | 73097..73540 | - | 444 | WP_010999935.1 | phospholipase | - |
| STMLT2P22_RS24250 () | 73706..73861 | - | 156 | WP_000983042.1 | hypothetical protein | - |
| STMLT2P22_RS24255 () | 73874..74158 | - | 285 | WP_000477658.1 | hypothetical protein | - |
| STMLT2P22_RS24260 () | 74273..74836 | - | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| STMLT2P22_RS24265 () | 74891..75631 | - | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| STMLT2P22_RS24270 () | 75651..80909 | - | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| STMLT2P22_RS24275 () | 80991..81218 | + | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| STMLT2P22_RS24280 () | 81218..81616 | + | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| STMLT2P22_RS24285 () | 81625..83868 | - | 2244 | WP_000009320.1 | type IV conjugative transfer system coupling protein TraD | - |
| STMLT2P22_RS24290 () | 84245..84976 | - | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| STMLT2P22_RS24295 () | 85012..85506 | - | 495 | WP_010999946.1 | entry exclusion protein | - |
| STMLT2P22_RS24300 () | 85522..88344 | - | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| STMLT2P22_RS24305 () | 88341..89723 | - | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| STMLT2P22_RS24310 () | 89713..90261 | - | 549 | WP_000055840.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| STMLT2P22_RS24315 () | 90248..90541 | - | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| STMLT2P22_RS24320 () | 90755..91504 | - | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| STMLT2P22_RS24325 () | 91516..91731 | - | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| STMLT2P22_RS24330 () | 91742..93568 | - | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| STMLT2P22_RS24335 () | 93565..93927 | - | 363 | WP_188356165.1 | HNH endonuclease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|