MGE detailed information
MGE type: Prophage MGE length: 26360 bp
Accession: NZ_LR878365 Location: 2270151..2296510 Organism: Shigella flexneri 3a isolate 83 Replicon: chromosome
Accession: NZ_LR878365 Location: 2270151..2296510 Organism: Shigella flexneri 3a isolate 83 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JMV05_RS11410 (2265482) | 2265482..2266543 | - | 1062 | WP_000138744.1 | YcjF family protein | - |
| JMV05_RS11415 (2266540) | 2266540..2267937 | - | 1398 | WP_000825773.1 | YcjX family protein | - |
| JMV05_RS11420 (2268092) | 2268092..2269090 | + | 999 | WP_000075372.1 | LacI family DNA-binding transcriptional regulator | - |
| JMV05_RS11425 (2269201) | 2269201..2270106 | - | 906 | WP_021577276.1 | monomeric porin OmpG | - |
| JMV05_RS11430 (2270151) | 2270151..2271233 | - | 1083 | WP_000057968.1 | Oligosaccharides import ATP-binding protein MsmX | VF |
| JMV05_RS11435 (2271247) | 2271247..2271906 | - | 660 | WP_000775779.1 | beta-phosphoglucomutase | - |
| JMV05_RS11440 (2271903) | 2271903..2273405 | - | 1503 | Protein_2236 | kojibiose phosphorylase | - |
| JMV05_RS11445 (2273490) | 2273490..2273855 | + | 366 | WP_000124119.1 | hypothetical protein | - |
| JMV05_RS11450 (2273855) | 2273855..2275042 | + | 1188 | Protein_2238 | IS91 family transposase ISEc37 | Transposase |
| JMV05_RS11455 (2275454) | 2275454..2276008 | - | 555 | WP_000640143.1 | DUF1133 family protein | - |
| JMV05_RS11460 (2276005) | 2276005..2276295 | - | 291 | WP_000228038.1 | DUF1364 domain-containing protein | - |
| JMV05_RS11465 (2276295) | 2276295..2276894 | - | 600 | WP_000940329.1 | DUF1367 family protein | - |
| JMV05_RS11470 (2277028) | 2277028..2277725 | + | 698 | WP_225620296.1 | IS1 family transposase IS1X2 | Transposase |
| JMV05_RS11475 (2278231) | 2278231..2278386 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | Toxin Detail |
| JMV05_RS11480 (2278841) | 2278841..2279206 | - | 366 | WP_000610655.1 | DUF551 domain-containing protein | - |
| JMV05_RS11485 (2279206) | 2279206..2279871 | - | 666 | WP_005115317.1 | hypothetical protein | - |
| JMV05_RS11490 (2279871) | 2279871..2280233 | - | 363 | Protein_2246 | HNH endonuclease | - |
| JMV05_RS11495 (2280235) | 2280235..2280453 | - | 219 | WP_000256997.1 | DUF4014 family protein | - |
| JMV05_RS11500 (2280546) | 2280546..2280902 | - | 357 | WP_000403784.1 | hypothetical protein | - |
| JMV05_RS11505 (2280960) | 2280960..2281382 | - | 423 | WP_001118171.1 | DUF977 family protein | - |
| JMV05_RS11510 (2281397) | 2281397..2282143 | - | 747 | WP_000788996.1 | ATP-binding protein | - |
| JMV05_RS11515 (2282289) | 2282289..2282458 | - | 170 | Protein_2251 | hypothetical protein | - |
| JMV05_RS11520 (2282982) | 2282982..2284210 | + | 1229 | WP_173020739.1 | IS3 family transposase IS2 | Transposase |
| JMV05_RS11525 (2284224) | 2284224..2284634 | - | 411 | Protein_2253 | YdaU family protein | - |
| JMV05_RS11530 (2284738) | 2284738..2285894 | + | 1157 | WP_173020733.1 | IS3 family transposase IS600 | Transposase |
| JMV05_RS11535 (2285919) | 2285919..2286098 | - | 180 | WP_000372593.1 | class II holin family protein | - |
| JMV05_RS11540 (2286248) | 2286248..2286409 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| JMV05_RS11545 (2286409) | 2286409..2286594 | - | 186 | Protein_2257 | DUF1737 domain-containing protein | - |
| JMV05_RS11550 (2286854) | 2286854..2287189 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| JMV05_RS11555 (2287470) | 2287470..2287556 | - | 87 | WP_000115835.1 | DUF3927 family protein | - |
| JMV05_RS11570 (2288498) | 2288498..2289319 | - | 822 | WP_000762884.1 | antitermination protein | - |
| JMV05_RS11575 (2289334) | 2289334..2289690 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| JMV05_RS11580 (2289703) | 2289703..2290752 | - | 1050 | WP_025759563.1 | DUF968 domain-containing protein | - |
| JMV05_RS11585 (2290754) | 2290754..2291032 | - | 279 | WP_024258459.1 | hypothetical protein | - |
| JMV05_RS11590 (2291099) | 2291099..2291349 | - | 251 | Protein_2264 | hypothetical protein | - |
| JMV05_RS11595 (2291567) | 2291567..2291722 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| JMV05_RS11600 (2291794) | 2291794..2292081 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| JMV05_RS11605 (2292081) | 2292081..2292320 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| JMV05_RS11610 (2292345) | 2292345..2292650 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| JMV05_RS11620 (2293867) | 2293867..2294225 | + | 359 | Protein_2270 | type 1 fimbrial protein | - |
| JMV05_RS11625 (2294238) | 2294238..2294603 | + | 366 | Protein_2271 | Protein FimG | VF |
| JMV05_RS11630 (2294678) | 2294678..2294887 | - | 210 | Protein_2272 | IS1 family transposase IS1X2 | Transposase |
| JMV05_RS11635 (2294952) | 2294952..2296161 | - | 1210 | Protein_2273 | IS3 family transposase IS629 | Transposase |
| JMV05_RS11640 (2296153) | 2296153..2296704 | - | 552 | Protein_2274 | IS1 family transposase IS1X1 | Transposase |
| JMV05_RS11645 (2296760) | 2296760..2297509 | + | 750 | Protein_2275 | fimbrial protein | - |
| JMV05_RS11650 (2297843) | 2297843..2300122 | + | 2280 | WP_000726665.1 | acid resistance putative oxidoreductase YdeP | - |
| JMV05_RS11655 (2300370) | 2300370..2300567 | + | 198 | WP_000543382.1 | two-component system connector SafA | - |
| JMV05_RS11660 (2300641) | 2300641..2301402 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|