MGE detailed information
MGE type: Prophage MGE length: 62562 bp
Accession: NZ_LR698953 Location: 1660928..1723489 Organism: Bifidobacterium longum isolate MGYG-HGUT-01292 Replicon: chromosome
Accession: NZ_LR698953 Location: 1660928..1723489 Organism: Bifidobacterium longum isolate MGYG-HGUT-01292 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FXZ20_RS08145 () | 1657903..1658163 | + | 261 | WP_012577807.1 | 30S ribosomal protein S20 | - |
| FXZ20_RS08150 () | 1658375..1659145 | - | 771 | WP_012577808.1 | TRIC cation channel family protein | - |
| FXZ20_RS08155 () | 1659675..1660574 | - | 900 | WP_014484947.1 | nucleotide pyrophosphohydrolase | - |
| FXZ20_RS08160 () | 1660928..1662319 | + | 1392 | WP_012577810.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| FXZ20_RS08165 () | 1662410..1662847 | + | 438 | WP_012577811.1 | DUF4065 domain-containing protein | - |
| FXZ20_RS08170 () | 1662847..1663350 | + | 504 | WP_012577812.1 | hypothetical protein | - |
| FXZ20_RS08175 () | 1663422..1664042 | - | 621 | WP_012577813.1 | hypothetical protein | - |
| FXZ20_RS08180 () | 1664105..1664464 | - | 360 | WP_014484948.1 | hypothetical protein | - |
| FXZ20_RS08185 () | 1664503..1664865 | - | 363 | WP_012577815.1 | hypothetical protein | - |
| FXZ20_RS08190 () | 1664888..1665250 | - | 363 | WP_012577816.1 | helix-turn-helix domain-containing protein | - |
| FXZ20_RS08195 () | 1665338..1665613 | + | 276 | WP_041981985.1 | helix-turn-helix domain-containing protein | - |
| FXZ20_RS08200 () | 1665707..1665892 | - | 186 | WP_041981969.1 | hypothetical protein | - |
| FXZ20_RS08205 () | 1665925..1666140 | + | 216 | WP_012577818.1 | hypothetical protein | - |
| FXZ20_RS08210 () | 1666852..1667205 | + | 354 | WP_012577820.1 | hypothetical protein | - |
| FXZ20_RS08215 () | 1667205..1667483 | + | 279 | WP_012577821.1 | hypothetical protein | - |
| FXZ20_RS08220 () | 1667467..1667634 | + | 168 | WP_014484951.1 | DivIVA domain-containing protein | - |
| FXZ20_RS08225 () | 1667631..1668482 | + | 852 | WP_012577822.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| FXZ20_RS08230 () | 1668473..1669057 | + | 585 | WP_012577823.1 | ERF family protein | - |
| FXZ20_RS08235 () | 1669047..1669982 | + | 936 | WP_014484952.1 | hypothetical protein | - |
| FXZ20_RS08240 () | 1670167..1670700 | + | 534 | WP_012577825.1 | single-stranded DNA-binding protein | - |
| FXZ20_RS08245 () | 1670693..1671046 | + | 354 | WP_012577826.1 | hypothetical protein | - |
| FXZ20_RS08250 () | 1671159..1672100 | + | 942 | WP_012577827.1 | hypothetical protein | - |
| FXZ20_RS08255 () | 1672401..1672937 | + | 537 | WP_014484954.1 | hypothetical protein | - |
| FXZ20_RS08260 () | 1673052..1673414 | + | 363 | WP_012577829.1 | hypothetical protein | - |
| FXZ20_RS08265 () | 1673411..1673656 | + | 246 | WP_012577830.1 | hypothetical protein | - |
| FXZ20_RS08270 () | 1673656..1673925 | + | 270 | WP_014484955.1 | hypothetical protein | - |
| FXZ20_RS08275 () | 1673922..1674434 | + | 513 | WP_012577831.1 | hypothetical protein | - |
| FXZ20_RS08280 () | 1674431..1674643 | + | 213 | WP_014484956.1 | hypothetical protein | - |
| FXZ20_RS08285 () | 1674633..1674920 | + | 288 | WP_012577832.1 | hypothetical protein | - |
| FXZ20_RS08290 () | 1674913..1675197 | + | 285 | WP_012577833.1 | hypothetical protein | - |
| FXZ20_RS13790 () | 1675194..1675358 | + | 165 | WP_007051868.1 | hypothetical protein | - |
| FXZ20_RS08295 () | 1675355..1675564 | + | 210 | WP_012577834.1 | hypothetical protein | - |
| FXZ20_RS08300 () | 1675601..1675825 | + | 225 | WP_012577835.1 | WhiB family transcriptional regulator | - |
| FXZ20_RS08305 () | 1675818..1676108 | + | 291 | WP_012577836.1 | hypothetical protein | - |
| FXZ20_RS13795 () | 1676086..1676244 | + | 159 | WP_015713523.1 | hypothetical protein | - |
| FXZ20_RS08310 () | 1676372..1676764 | + | 393 | WP_012577837.1 | hypothetical protein | - |
| FXZ20_RS08315 () | 1676761..1677132 | + | 372 | WP_012577838.1 | hypothetical protein | - |
| FXZ20_RS08320 () | 1677142..1677417 | + | 276 | WP_012577839.1 | hypothetical protein | - |
| FXZ20_RS08325 () | 1677414..1677614 | + | 201 | WP_041981975.1 | hypothetical protein | - |
| FXZ20_RS08330 () | 1677643..1677882 | + | 240 | WP_012577840.1 | hypothetical protein | - |
| FXZ20_RS08335 () | 1677885..1678763 | + | 879 | WP_012577841.1 | hypothetical protein | - |
| FXZ20_RS08340 () | 1678747..1679238 | + | 492 | WP_014484959.1 | hypothetical protein | - |
| FXZ20_RS08345 () | 1679307..1680218 | + | 912 | WP_012577843.1 | hypothetical protein | - |
| FXZ20_RS08350 () | 1680215..1680550 | + | 336 | WP_012577844.1 | hypothetical protein | - |
| FXZ20_RS08355 () | 1680554..1681759 | + | 1206 | WP_012577845.1 | DNA cytosine methyltransferase | - |
| FXZ20_RS08360 () | 1681981..1682223 | + | 243 | WP_077323823.1 | DNA cytosine methyltransferase | - |
| FXZ20_RS08365 () | 1682220..1682999 | + | 780 | WP_012577846.1 | phage antirepressor Ant | - |
| FXZ20_RS08370 () | 1682996..1683253 | + | 258 | WP_012577847.1 | hypothetical protein | - |
| FXZ20_RS08375 () | 1683250..1683741 | + | 492 | WP_012577848.1 | hypothetical protein | - |
| FXZ20_RS08380 () | 1683887..1684291 | - | 405 | WP_014484963.1 | hypothetical protein ; Integrase | Integrase |
| FXZ20_RS08385 () | 1684288..1684548 | - | 261 | WP_012577849.1 | hypothetical protein | - |
| FXZ20_RS08390 () | 1684703..1685047 | - | 345 | WP_012577850.1 | hypothetical protein | - |
| FXZ20_RS08395 () | 1685178..1685549 | - | 372 | WP_012577851.1 | hypothetical protein | - |
| FXZ20_RS08400 () | 1685656..1686411 | - | 756 | WP_012577852.1 | hypothetical protein | - |
| FXZ20_RS08405 () | 1686408..1686635 | - | 228 | WP_014484964.1 | hypothetical protein | - |
| FXZ20_RS08410 () | 1686632..1687177 | - | 546 | WP_012577853.1 | hypothetical protein | - |
| FXZ20_RS08415 () | 1687366..1687734 | - | 369 | WP_012577854.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| FXZ20_RS08420 () | 1687715..1687999 | - | 285 | WP_012577855.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| FXZ20_RS08425 () | 1688075..1688374 | - | 300 | WP_012577856.1 | hypothetical protein | - |
| FXZ20_RS08430 () | 1688462..1688644 | - | 183 | WP_014484966.1 | hypothetical protein | - |
| FXZ20_RS08435 () | 1688644..1688985 | - | 342 | WP_012577857.1 | hypothetical protein | - |
| FXZ20_RS08440 () | 1688987..1689772 | - | 786 | WP_012577858.1 | hypothetical protein | - |
| FXZ20_RS08445 () | 1689971..1690312 | - | 342 | WP_012577859.1 | hypothetical protein | - |
| FXZ20_RS08450 () | 1690426..1690770 | - | 345 | WP_014484967.1 | hypothetical protein | - |
| FXZ20_RS13800 () | 1690767..1690928 | - | 162 | WP_155245937.1 | hypothetical protein | - |
| FXZ20_RS08455 () | 1691018..1691632 | - | 615 | WP_012577862.1 | lysozyme | - |
| FXZ20_RS08460 () | 1691845..1692072 | - | 228 | WP_025221588.1 | helix-turn-helix domain-containing protein | - |
| FXZ20_RS08490 () | 1694202..1694540 | + | 339 | WP_014484970.1 | HNH endonuclease | - |
| FXZ20_RS08495 () | 1695068..1695547 | + | 480 | WP_012577864.1 | hypothetical protein | - |
| FXZ20_RS08500 () | 1695547..1697445 | + | 1899 | WP_012577865.1 | hypothetical protein | - |
| FXZ20_RS08505 () | 1697467..1699089 | + | 1623 | WP_012577866.1 | hypothetical protein | - |
| FXZ20_RS08510 () | 1699098..1700174 | + | 1077 | WP_012577867.1 | hypothetical protein | - |
| FXZ20_RS08515 () | 1700190..1700825 | + | 636 | WP_012577868.1 | hypothetical protein | - |
| FXZ20_RS08520 () | 1700856..1701650 | + | 795 | WP_012577869.1 | hypothetical protein | - |
| FXZ20_RS08525 () | 1701718..1702788 | + | 1071 | WP_012577870.1 | major capsid protein | - |
| FXZ20_RS08530 () | 1702801..1703232 | + | 432 | WP_012577871.1 | hypothetical protein | - |
| FXZ20_RS08535 () | 1703240..1703803 | + | 564 | WP_012577872.1 | hypothetical protein | - |
| FXZ20_RS08540 () | 1703766..1704119 | + | 354 | WP_014484971.1 | hypothetical protein | - |
| FXZ20_RS08545 () | 1704126..1704584 | + | 459 | WP_012577874.1 | hypothetical protein | - |
| FXZ20_RS08550 () | 1704653..1705258 | + | 606 | WP_012577875.1 | hypothetical protein | - |
| FXZ20_RS08555 () | 1705475..1705897 | + | 423 | WP_012577876.1 | hypothetical protein | - |
| FXZ20_RS08560 () | 1705942..1706280 | + | 339 | WP_113738642.1 | hypothetical protein | - |
| FXZ20_RS08565 () | 1710810..1711061 | - | 252 | WP_077323825.1 | hypothetical protein | - |
| FXZ20_RS08570 () | 1711150..1712100 | + | 951 | WP_012577879.1 | hypothetical protein | - |
| FXZ20_RS08575 () | 1712114..1716262 | + | 4149 | WP_012577880.1 | hypothetical protein | - |
| FXZ20_RS08580 () | 1716272..1716844 | + | 573 | WP_012577881.1 | hypothetical protein | - |
| FXZ20_RS13805 () | 1716848..1717018 | + | 171 | WP_012577882.1 | hypothetical protein | - |
| FXZ20_RS08585 () | 1717093..1717593 | + | 501 | WP_012577883.1 | hypothetical protein | - |
| FXZ20_RS08590 () | 1717675..1718874 | - | 1200 | WP_012577584.1 | IS110 family transposase ISArsp5 | Transposase |
| FXZ20_RS08595 () | 1719196..1719705 | + | 510 | WP_012577885.1 | hypothetical protein | - |
| FXZ20_RS08600 () | 1719731..1720186 | + | 456 | WP_012577886.1 | hypothetical protein | - |
| FXZ20_RS08605 () | 1720213..1720608 | + | 396 | WP_012577887.1 | hypothetical protein | - |
| FXZ20_RS08610 () | 1720669..1721901 | + | 1233 | WP_012577888.1 | LysM peptidoglycan-binding domain-containing protein | - |
| FXZ20_RS08615 () | 1721980..1722246 | + | 267 | WP_012577889.1 | holin | - |
| FXZ20_RS08625 () | 1722995..1723489 | - | 495 | WP_012577890.1 | hypothetical protein | - |
| FXZ20_RS08630 () | 1723918..1725045 | - | 1128 | WP_012577891.1 | branched-chain amino acid aminotransferase | - |
| FXZ20_RS08635 () | 1725270..1725893 | - | 624 | WP_012577892.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| FXZ20_RS08645 () | 1726322..1727359 | + | 1038 | WP_012577893.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 | Prophage | TA6258 | NC_011593 | 1660928..1723489 | 0 |