MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 148769 bp
Accession: NZ_LR217818 Location: 716973..865741 Organism: Escherichia coli strain NCTC86 Replicon: chromosome
Accession: NZ_LR217818 Location: 716973..865741 Organism: Escherichia coli strain NCTC86 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E4V11_RS03420 () | 712425..713246 | + | 822 | WP_001281927.1 | undecaprenyl-diphosphate phosphatase | - |
| E4V11_RS03425 () | 713336..714574 | - | 1239 | WP_000708487.1 | fused tRNA nucleotidyltransferase/2',3'-cyclic phosphodiesterase/2' nucleotidase/phosphatase Cca | - |
| E4V11_RS03430 () | 714638..715258 | - | 621 | WP_001125331.1 | SH3 domain-containing protein | - |
| E4V11_RS03435 () | 715500..716801 | + | 1302 | WP_000046281.1 | inorganic triphosphatase | - |
| E4V11_RS03440 () | 716824..719664 | + | 2841 | WP_001301081.1 | bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase | - |
| E4V11_RS03445 () | 719712..721145 | + | 1434 | WP_000869178.1 | Bifunctional protein HldE | VF |
| - () | 721225..721366 | + | 142 | NuclAT_1 | - | - |
| - () | 721225..721366 | + | 142 | NuclAT_1 | - | - |
| - () | 721225..721366 | + | 142 | NuclAT_1 | - | - |
| - () | 721225..721366 | + | 142 | NuclAT_1 | - | - |
| - () | 721225..721366 | + | 142 | NuclAT_2 | - | - |
| - () | 721225..721366 | + | 142 | NuclAT_2 | - | - |
| - () | 721225..721366 | + | 142 | NuclAT_2 | - | - |
| - () | 721225..721366 | + | 142 | NuclAT_2 | - | - |
| E4V11_RS03450 () | 721265..721324 | - | 60 | WP_010723221.1 | type I toxin-antitoxin system toxin IbsE | - |
| - () | 721600..721742 | + | 143 | NuclAT_0 | - | - |
| - () | 721600..721742 | + | 143 | NuclAT_0 | - | - |
| - () | 721600..721742 | + | 143 | NuclAT_0 | - | - |
| - () | 721600..721742 | + | 143 | NuclAT_0 | - | - |
| - () | 721600..721742 | + | 143 | NuclAT_3 | - | - |
| - () | 721600..721742 | + | 143 | NuclAT_3 | - | - |
| - () | 721600..721742 | + | 143 | NuclAT_3 | - | - |
| - () | 721600..721742 | + | 143 | NuclAT_3 | - | - |
| E4V11_RS03455 () | 721640..721699 | - | 60 | WP_001387081.1 | type I toxin-antitoxin system Ibs family toxin | - |
| E4V11_RS03460 () | 721940..723601 | - | 1662 | WP_001311137.1 | flotillin family protein | - |
| E4V11_RS03465 () | 723628..724257 | - | 630 | WP_000599926.1 | DUF1449 family protein | - |
| E4V11_RS03470 () | 724526..724726 | + | 201 | WP_000350095.1 | cell surface composition regulator GlgS | - |
| E4V11_RS03475 () | 724769..725833 | - | 1065 | WP_066008836.1 | fimbrial protein | - |
| E4V11_RS03480 () | 725835..726584 | - | 750 | WP_001269824.1 | Chaperone protein PapD | VF |
| E4V11_RS03485 () | 726600..727664 | - | 1065 | Protein_682 | Outer membrane usher protein PapC | VF |
| E4V11_RS03490 () | 727755..728983 | + | 1229 | WP_172600784.1 | IS3 family transposase IS2 | Transposase |
| E4V11_RS03495 () | 728995..730440 | - | 1446 | Protein_684 | Outer membrane usher protein PapC | VF |
| E4V11_RS03500 () | 730500..731051 | - | 552 | WP_001272145.1 | putative fimbrial-like protein YbgD | VF |
| E4V11_RS03505 () | 731335..731625 | - | 291 | WP_001295626.1 | ubiquinone biosynthesis accessory factor UbiK | - |
| E4V11_RS03510 () | 731999..732652 | + | 654 | WP_001076997.1 | 3,4-dihydroxy-2-butanone-4-phosphate synthase | - |
| E4V11_RS24895 () | 732914..733084 | + | 171 | WP_000469266.1 | hypothetical protein | - |
| E4V11_RS03515 () | 733142..733915 | - | 774 | WP_001295627.1 | zinc transporter ZupT | - |
| E4V11_RS03520 () | 734058..734846 | + | 789 | WP_001320780.1 | 4,5-DOPA dioxygenase extradiol | - |
| E4V11_RS03525 () | 734884..736044 | - | 1161 | WP_000442860.1 | glutathionylspermidine synthase family protein | - |
| E4V11_RS03530 () | 736050..736721 | - | 672 | WP_000831543.1 | DUF1190 family protein | - |
| E4V11_RS03535 () | 736869..738350 | - | 1482 | WP_000735278.1 | outer membrane channel protein TolC | - |
| E4V11_RS03540 () | 738555..739184 | + | 630 | WP_000917117.1 | ADP-ribose diphosphatase | - |
| E4V11_RS03545 () | 739185..739607 | + | 423 | WP_000833393.1 | DUF1249 family protein | - |
| E4V11_RS03550 () | 739632..740459 | + | 828 | WP_000444747.1 | 3',5'-cyclic-AMP phosphodiesterase | - |
| E4V11_RS03555 () | 740459..741040 | + | 582 | WP_000105733.1 | esterase YqiA | - |
| E4V11_RS03560 () | 741069..742961 | + | 1893 | WP_066009685.1 | DNA topoisomerase IV subunit B | - |
| E4V11_RS03565 () | 743009..743323 | - | 315 | WP_000958598.1 | antibiotic biosynthesis monooxygenase | - |
| E4V11_RS03570 () | 743354..743935 | - | 582 | WP_000065430.1 | NADPH:quinone oxidoreductase MdaB | - |
| E4V11_RS03575 () | 744254..744586 | + | 333 | WP_000917684.1 | DUF2645 family protein | - |
| E4V11_RS03580 () | 744632..745981 | - | 1350 | WP_000673402.1 | two-component system sensor histidine kinase QseC | - |
| E4V11_RS03585 () | 745978..746637 | - | 660 | WP_001221493.1 | Transcriptional regulatory protein QseB | VF |
| E4V11_RS03590 () | 746789..747181 | + | 393 | WP_000712658.1 | OB fold stress tolerance protein YgiW | - |
| E4V11_RS03595 () | 747234..747716 | + | 483 | WP_000183505.1 | transcriptional regulator | - |
| E4V11_RS03600 () | 747921..748217 | + | 297 | WP_000415584.1 | type II toxin-antitoxin system toxin MqsR | Toxin Detail |
| E4V11_RS03605 () | 748219..748614 | + | 396 | WP_000650107.1 | type II toxin-antitoxin system antitoxin MqsA | Antitoxin Detail |
| E4V11_RS03610 () | 748747..750354 | + | 1608 | WP_021561146.1 | ABC transporter substrate-binding protein | - |
| E4V11_RS03615 () | 750492..752750 | + | 2259 | WP_001281881.1 | DNA topoisomerase IV subunit A | - |
| E4V11_RS03620 () | 752984..753721 | + | 738 | WP_000965722.1 | 1-acylglycerol-3-phosphate O-acyltransferase | - |
| E4V11_RS03625 () | 753796..755208 | + | 1413 | WP_000059388.1 | cell division protein FtsP | - |
| E4V11_RS03630 () | 755319..757537 | + | 2219 | Protein_712 | YgiQ family radical SAM protein | - |
| E4V11_RS03635 () | 757580..757837 | - | 258 | WP_000848528.1 | lipoprotein YqhH | - |
| E4V11_RS03640 () | 757888..758814 | - | 927 | WP_000691619.1 | YbjP/YqhG family protein | - |
| E4V11_RS03645 () | 759014..759841 | - | 828 | WP_066009683.1 | 2,5-didehydrogluconate reductase DkgA | - |
| E4V11_RS03650 () | 759946..761109 | - | 1164 | WP_001058802.1 | alcohol dehydrogenase | - |
| E4V11_RS03655 () | 761303..762202 | + | 900 | WP_001298382.1 | DNA-binding transcriptional regulator YqhC | - |
| E4V11_RS03660 () | 762242..762901 | - | 660 | WP_000268419.1 | DedA family protein | - |
| E4V11_RS03665 () | 763041..764228 | - | 1188 | WP_066009680.1 | cystathionine beta-lyase | - |
| E4V11_RS03670 () | 764480..765214 | + | 735 | WP_000527844.1 | tol-pal system-associated acyl-CoA thioesterase | - |
| E4V11_RS03675 () | 765221..765646 | + | 426 | WP_001545627.1 | TonB system transport protein ExbD | - |
| E4V11_RS03680 () | 765918..766802 | - | 885 | WP_000018760.1 | putative oxidoreductase YghA | VF |
| E4V11_RS03685 () | 766993..767487 | + | 495 | WP_000439331.1 | TIGR00645 family protein | - |
| E4V11_RS03690 () | 767527..768567 | - | 1041 | WP_000262172.1 | L-glyceraldehyde 3-phosphate reductase | - |
| E4V11_RS03695 () | 768724..769608 | + | 885 | Protein_725 | dienelactone hydrolase family protein | - |
| E4V11_RS03700 () | 769727..770014 | + | 288 | WP_001059136.1 | DUF2623 domain-containing protein | - |
| E4V11_RS03705 () | 770203..771321 | + | 1119 | WP_066009678.1 | hydrogenase 2 small subunit | - |
| E4V11_RS03710 () | 771324..772310 | + | 987 | WP_001081870.1 | hydrogenase 2 operon protein HybA | - |
| E4V11_RS03715 () | 772300..773478 | + | 1179 | WP_000017703.1 | Ni/Fe-hydrogenase cytochrome b subunit | - |
| E4V11_RS03720 () | 773475..775178 | + | 1704 | WP_000083052.1 | hydrogenase 2 large subunit | - |
| E4V11_RS03725 () | 775178..775672 | + | 495 | WP_001221939.1 | HyaD/HybD family hydrogenase maturation endopeptidase | - |
| E4V11_RS03730 () | 775665..776153 | + | 489 | WP_000134014.1 | hydrogenase-2 assembly chaperone | - |
| E4V11_RS03735 () | 776146..776487 | + | 342 | WP_000544953.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| E4V11_RS03740 () | 776500..776748 | + | 249 | WP_000334896.1 | hydrogenase maturation factor HybG | - |
| E4V11_RS03745 () | 776871..777737 | - | 867 | WP_001295515.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| E4V11_RS03750 () | 777942..779801 | + | 1860 | WP_001297309.1 | bifunctional glutathionylspermidine amidase/synthase | - |
| E4V11_RS03755 () | 780093..781592 | + | 1500 | WP_000933250.1 | inorganic phosphate transporter PitB | - |
| E4V11_RS03760 () | 781641..782333 | - | 693 | WP_001190781.1 | thymidylate kinase | - |
| E4V11_RS03765 () | 782507..783220 | + | 714 | WP_001076243.1 | thymidylate kinase | - |
| E4V11_RS03770 () | 783252..784010 | + | 759 | WP_000339531.1 | ATP-binding protein | - |
| E4V11_RS03775 () | 784056..785405 | + | 1350 | WP_000896896.1 | lipopolysaccharide biosynthesis protein | - |
| E4V11_RS03780 () | 785405..786229 | + | 825 | WP_000984978.1 | hypothetical protein | - |
| E4V11_RS03785 () | 786241..786801 | + | 561 | WP_001298770.1 | YtfJ family protein | - |
| E4V11_RS03790 () | 786832..787903 | + | 1072 | Protein_744 | LPS export ABC transporter permease LptF | - |
| E4V11_RS03795 () | 787900..788979 | + | 1080 | WP_001318997.1 | LPS export ABC transporter permease LptG | - |
| E4V11_RS03800 () | 789014..790186 | - | 1173 | WP_000524970.1 | 8-amino-7-oxononanoate synthase | VF |
| E4V11_RS03805 () | 790186..790434 | - | 249 | WP_000248097.1 | acyl carrier protein | - |
| E4V11_RS03810 () | 790466..791380 | - | 915 | WP_001077166.1 | NAD-dependent epimerase/dehydratase family protein | - |
| E4V11_RS03815 () | 791377..793098 | - | 1722 | WP_206751254.1 | 4-hydroxyphenylalkanoate adenylyltransferase | VF |
| E4V11_RS03820 () | 793475..794617 | + | 1143 | WP_001300526.1 | DNA-binding protein | - |
| E4V11_RS03825 () | 794624..795388 | - | 765 | WP_001297764.1 | transcriptional regulator GlcC | - |
| E4V11_RS03830 () | 795632..797131 | + | 1500 | WP_000026117.1 | glycolate oxidase subunit GlcD | - |
| E4V11_RS03835 () | 797131..798183 | + | 1053 | WP_000943077.1 | glycolate oxidase subunit GlcE | - |
| E4V11_RS03840 () | 798194..799417 | + | 1224 | WP_001194816.1 | glycolate oxidase subunit GlcF | - |
| E4V11_RS03845 () | 799422..799826 | + | 405 | WP_000853256.1 | protein GlcG | - |
| E4V11_RS03850 () | 799848..802018 | + | 2171 | Protein_756 | malate synthase G | - |
| E4V11_RS03855 () | 802373..804055 | + | 1683 | WP_021519491.1 | glycolate permease GlcA | - |
| E4V11_RS03860 () | 804191..805537 | + | 1347 | WP_071836851.1 | IS4 family transposase IS4 | Transposase |
| E4V11_RS03870 () | 805718..806134 | + | 417 | Protein_759 | hypothetical protein | VF |
| E4V11_RS03875 () | 806131..807308 | + | 1178 | Protein_760 | hypothetical protein | VF |
| E4V11_RS03880 () | 807310..807846 | + | 537 | WP_000942819.1 | Type II secretion system protein M | VF |
| E4V11_RS03885 () | 809020..809796 | + | 777 | WP_066009189.1 | Polysialic acid transport protein KpsM | VF |
| E4V11_RS03890 () | 809793..810464 | + | 672 | WP_000590253.1 | Polysialic acid transport ATP-binding protein KpsT | VF |
| E4V11_RS03895 () | 810476..810872 | + | 397 | Protein_764 | pantoate--beta-alanine ligase | - |
| E4V11_RS03900 () | 810888..812123 | + | 1236 | WP_000668515.1 | hypothetical protein | - |
| E4V11_RS03905 () | 812177..815976 | + | 3800 | Protein_766 | hypothetical protein | VF |
| E4V11_RS03910 () | 816079..817107 | + | 1029 | WP_001044673.1 | hypothetical protein | VF |
| E4V11_RS03915 () | 817113..818108 | + | 996 | WP_001208051.1 | hypothetical protein | - |
| E4V11_RS03920 () | 818270..819508 | - | 1239 | WP_001161824.1 | hypothetical protein | VF |
| E4V11_RS03925 () | 819543..821570 | - | 2028 | WP_000579529.1 | hypothetical protein | VF |
| E4V11_RS03930 () | 821567..822307 | - | 741 | WP_001327873.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | VF |
| E4V11_RS03935 () | 822317..823993 | - | 1677 | WP_066008909.1 | Polysialic acid transport protein KpsD | VF |
| E4V11_RS03940 () | 824017..825165 | - | 1149 | WP_000905920.1 | hypothetical protein | VF |
| E4V11_RS03945 () | 825237..826220 | - | 984 | WP_066008910.1 | Arabinose 5-phosphate isomerase KpsF | VF |
| E4V11_RS24900 () | 827031..827186 | - | 156 | WP_000729639.1 | hypothetical protein | - |
| E4V11_RS03950 () | 827678..828004 | - | 327 | WP_001522265.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| E4V11_RS03955 () | 828001..828264 | - | 264 | WP_001143297.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| E4V11_RS03960 () | 828336..829202 | - | 867 | WP_023909479.1 | DUF4942 domain-containing protein | - |
| E4V11_RS03965 () | 829287..829484 | - | 198 | WP_001522268.1 | DUF957 domain-containing protein | - |
| E4V11_RS03970 () | 829496..829987 | - | 492 | WP_001522269.1 | hypothetical protein | - |
| E4V11_RS03975 () | 829984..830358 | - | 375 | WP_068879483.1 | TA system toxin CbtA family protein | Toxin Detail |
| E4V11_RS03980 () | 830405..830779 | - | 375 | WP_001522275.1 | type IV toxin-antitoxin system toxin CbtA | Antitoxin Detail |
| E4V11_RS03985 () | 830859..831080 | - | 222 | WP_023909484.1 | DUF987 domain-containing protein | - |
| E4V11_RS03990 () | 831132..831887 | - | 756 | WP_001522280.1 | IS21 family transposase ISEc10 | Transposase |
| E4V11_RS03995 () | 831884..833383 | - | 1500 | WP_001522281.1 | IS21 family transposase ISEc10 | Transposase |
| E4V11_RS04000 () | 833564..834040 | - | 477 | WP_001186724.1 | RadC family protein | - |
| E4V11_RS04005 () | 834055..834528 | - | 474 | WP_001522284.1 | antirestriction protein | - |
| E4V11_RS24905 () | 834623..834799 | - | 177 | WP_001522285.1 | hypothetical protein | - |
| E4V11_RS04010 () | 834799..835617 | - | 819 | WP_001522287.1 | DUF945 domain-containing protein | - |
| E4V11_RS04015 () | 835934..836362 | - | 429 | Protein_790 | autotransporter adhesin family protein | - |
| E4V11_RS04020 () | 836557..838098 | + | 1542 | WP_001620815.1 | IS21 family transposase ISEc12 | Transposase |
| E4V11_RS04025 () | 838113..838859 | + | 747 | Protein_792 | IS21-like element ISEc12 family helper ATPase IstB | - |
| E4V11_RS04030 () | 838946..841642 | - | 2697 | Protein_793 | autotransporter adhesin family protein | - |
| E4V11_RS04035 () | 841974..842846 | - | 873 | WP_068879482.1 | GTPase family protein | - |
| E4V11_RS04040 () | 842930..844086 | - | 1157 | Protein_795 | hypothetical protein | - |
| E4V11_RS04060 () | 846073..846681 | - | 609 | WP_077634145.1 | hypothetical protein | - |
| E4V11_RS04065 () | 846769..846975 | - | 207 | WP_001095913.1 | AlpA family transcriptional regulator | - |
| E4V11_RS24910 () | 847945..848194 | + | 250 | Protein_798 | hypothetical protein | - |
| E4V11_RS04085 () | 848321..848515 | - | 195 | WP_000236756.1 | hypothetical protein | - |
| E4V11_RS25035 () | 848711..849276 | + | 566 | Protein_800 | inovirus-type Gp2 protein | - |
| E4V11_RS04095 () | 849444..849827 | + | 384 | WP_016234003.1 | hypothetical protein | - |
| E4V11_RS04100 () | 849824..850234 | + | 411 | WP_001522299.1 | hypothetical protein | - |
| E4V11_RS04110 () | 850666..850899 | + | 234 | WP_001522301.1 | AlpA family transcriptional regulator | - |
| E4V11_RS04115 () | 851177..851710 | + | 534 | WP_001522302.1 | hypothetical protein | - |
| E4V11_RS04120 () | 851712..852188 | - | 477 | WP_001522303.1 | ProQ/FinO family protein | - |
| E4V11_RS24925 () | 852324..852647 | + | 324 | WP_157919120.1 | hypothetical protein | - |
| E4V11_RS04125 () | 852752..852907 | + | 156 | Protein_807 | Rpn family recombination-promoting nuclease/putative transposase | - |
| E4V11_RS04130 () | 853051..853572 | + | 522 | Protein_808 | DNA-binding protein | - |
| E4V11_RS04145 () | 855221..858826 | + | 3606 | WP_001522306.1 | hypothetical protein | - |
| E4V11_RS04150 () | 859095..859588 | - | 494 | Protein_811 | hypothetical protein | VF |
| E4V11_RS04155 () | 860775..861164 | + | 390 | WP_001522311.1 | hypothetical protein | - |
| E4V11_RS04165 () | 862892..863134 | + | 243 | WP_001522318.1 | hypothetical protein | - |
| E4V11_RS04175 () | 863573..863830 | - | 258 | WP_001522321.1 | Dr hemagglutinin AFA-III operon transcriptional regulator AfaF | - |
| E4V11_RS25040 () | 864631..864735 | + | 105 | Protein_816 | hypothetical protein | VF |
| E4V11_RS04185 () | 864826..866054 | + | 1229 | WP_102384962.1 | IS3 family transposase | - |
| E4V11_RS04190 () | 866066..866272 | + | 207 | Protein_818 | AFA-III adhesin operon transcriptional regulator AfaA | - |
| E4V11_RS04195 () | 866526..867323 | + | 798 | WP_001522323.1 | Dr fimbrial biogenesis chaperone DraB | - |
| E4V11_RS04200 () | 867363..869946 | + | 2584 | Protein_820 | AfaC-I/III family usher protein | - |
| E4V11_RS04205 () | 869962..870405 | + | 444 | WP_001522328.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|