MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88995 bp
Accession: NZ_LR216050 Location: 881886..970880 Organism: Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505 Replicon: chromosome
Accession: NZ_LR216050 Location: 881886..970880 Organism: Streptococcus pneumoniae strain GPSC10 substr. ST2013 isolate GPS_US_PATH396-sc-2296505 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0F32_RS04770 () | 876896..877525 | + | 630 | WP_000049036.1 | hypothetical protein | - |
| E0F32_RS04775 () | 877561..878784 | - | 1224 | WP_130885935.1 | peptidase T | - |
| E0F32_RS04780 () | 878939..880033 | + | 1095 | WP_000709247.1 | ferrochelatase | - |
| E0F32_RS04785 () | 880075..880452 | - | 378 | WP_000916795.1 | large conductance mechanosensitive channel protein MscL | - |
| E0F32_RS04790 () | 880534..880965 | - | 432 | WP_000742997.1 | GtrA family protein | - |
| E0F32_RS04795 () | 881088..881597 | + | 510 | WP_000737071.1 | QueT transporter family protein | - |
| E0F32_RS04810 () | 882355..883431 | + | 1077 | WP_000542473.1 | aspartate-semialdehyde dehydrogenase | - |
| E0F32_RS04815 () | 883487..884422 | + | 936 | WP_000121618.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| E0F32_RS04820 () | 884469..885842 | - | 1374 | WP_000632758.1 | tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE | - |
| E0F32_RS04825 () | 885978..886160 | - | 183 | WP_001117401.1 | 4-oxalocrotonate tautomerase | - |
| E0F32_RS04830 () | 886283..886873 | + | 591 | WP_000068143.1 | thymidine kinase | - |
| E0F32_RS04835 () | 886870..887949 | + | 1080 | WP_001028801.1 | peptide chain release factor 1 | - |
| E0F32_RS04840 () | 887949..888788 | + | 840 | WP_000761903.1 | peptide chain release factor N(5)-glutamine methyltransferase | - |
| E0F32_RS04845 () | 888772..889374 | + | 603 | WP_000969297.1 | threonylcarbamoyl-AMP synthase | - |
| E0F32_RS04850 () | 889376..889807 | + | 432 | WP_000942935.1 | GNAT family N-acetyltransferase | - |
| E0F32_RS04855 () | 889869..891125 | + | 1257 | WP_130885936.1 | serine hydroxymethyltransferase | - |
| E0F32_RS04860 () | 891133..892107 | + | 975 | WP_000356089.1 | nucleoid-associated protein | - |
| E0F32_RS04865 () | 892107..892721 | + | 615 | WP_000476372.1 | cell wall hydrolase Pmp23 | - |
| E0F32_RS04870 () | 892795..893769 | + | 975 | WP_001227735.1 | DUF1002 domain-containing protein | - |
| E0F32_RS04875 () | 893843..895204 | + | 1362 | WP_024477702.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| E0F32_RS11545 () | 895413..895586 | + | 174 | WP_000159607.1 | hypothetical protein | - |
| E0F32_RS04885 () | 895583..896362 | + | 780 | WP_000822762.1 | replication initiator protein A | - |
| E0F32_RS04890 () | 896461..897819 | + | 1359 | WP_001210970.1 | DNA (cytosine-5-)-methyltransferase | - |
| E0F32_RS04895 () | 897803..898252 | + | 450 | WP_000645888.1 | hypothetical protein | - |
| E0F32_RS04900 () | 898245..898625 | + | 381 | WP_130885937.1 | hypothetical protein | - |
| E0F32_RS04905 () | 898638..898871 | + | 234 | WP_000840776.1 | hypothetical protein | - |
| E0F32_RS04910 () | 898874..899476 | + | 603 | WP_130885938.1 | CPBP family intramembrane metalloprotease | - |
| E0F32_RS04915 () | 899638..900855 | - | 1218 | WP_001291561.1 | hypothetical protein ; Integrase | Integrase |
| E0F32_RS04920 () | 900937..901140 | - | 204 | WP_000814511.1 | excisionase | - |
| E0F32_RS04930 () | 901601..901831 | - | 231 | WP_000857133.1 | helix-turn-helix domain-containing protein | - |
| E0F32_RS04935 () | 901828..902250 | - | 423 | WP_000804885.1 | sigma-70 family RNA polymerase sigma factor | - |
| E0F32_RS04945 () | 902755..903108 | + | 354 | WP_001227347.1 | helix-turn-helix transcriptional regulator | - |
| E0F32_RS04950 () | 903168..903335 | - | 168 | WP_000336323.1 | cysteine-rich KTR domain-containing protein | - |
| E0F32_RS04955 () | 903454..905373 | - | 1920 | WP_130885939.1 | hypothetical protein | VF |
| E0F32_RS04960 () | 905389..905505 | - | 117 | WP_001814923.1 | tetracycline resistance determinant leader peptide | - |
| E0F32_RS04965 () | 905750..906685 | - | 936 | WP_001224320.1 | conjugal transfer protein | - |
| E0F32_RS04970 () | 906682..907683 | - | 1002 | WP_000769868.1 | hypothetical protein | VF |
| E0F32_RS04975 () | 907680..909857 | - | 2178 | WP_000804748.1 | membrane protein | - |
| E0F32_RS04980 () | 909860..912307 | - | 2448 | WP_000331160.1 | ATP-binding protein | - |
| E0F32_RS04985 () | 912291..912797 | - | 507 | WP_000506270.1 | conjugal transfer protein | - |
| E0F32_RS04990 () | 912772..913269 | - | 498 | WP_000342539.1 | antirestriction protein ArdA | - |
| E0F32_RS04995 () | 913386..913607 | - | 222 | WP_001009056.1 | hypothetical protein | - |
| E0F32_RS05000 () | 913650..914855 | - | 1206 | WP_000398284.1 | replication initiation factor domain-containing protein | - |
| E0F32_RS05005 () | 914878..915030 | - | 153 | WP_000879507.1 | hypothetical protein | - |
| E0F32_RS05010 () | 915033..916418 | - | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| E0F32_RS05015 () | 916447..916833 | - | 387 | WP_000985015.1 | YdcP family protein | - |
| E0F32_RS05020 () | 916849..917163 | - | 315 | WP_000420682.1 | YdcP family protein | - |
| E0F32_RS05030 () | 917836..918135 | + | 300 | WP_000869760.1 | hypothetical protein | - |
| E0F32_RS05035 () | 918125..918613 | + | 489 | WP_000093672.1 | hypothetical protein | - |
| E0F32_RS05040 () | 918613..920490 | + | 1878 | WP_012677090.1 | type IV secretory system conjugative DNA transfer family protein | - |
| E0F32_RS05045 () | 920511..920753 | + | 243 | WP_000627865.1 | hypothetical protein | - |
| E0F32_RS05050 () | 920770..921624 | + | 855 | WP_001054259.1 | conjugal transfer protein TrbL | - |
| E0F32_RS05055 () | 921678..922037 | + | 360 | WP_024477698.1 | PrgI family protein | - |
| E0F32_RS05060 () | 921988..924345 | + | 2358 | WP_171964974.1 | AAA family ATPase | - |
| E0F32_RS05065 () | 924357..927170 | + | 2814 | WP_000653450.1 | CHAP domain-containing protein | - |
| E0F32_RS05070 () | 927205..927813 | - | 609 | WP_024478356.1 | hypothetical protein | - |
| E0F32_RS11550 () | 927815..927979 | - | 165 | WP_171964973.1 | hypothetical protein | - |
| E0F32_RS05075 () | 928035..928298 | - | 264 | WP_074192753.1 | hypothetical protein | - |
| E0F32_RS05085 () | 928440..928850 | + | 411 | WP_000387508.1 | thrombospondin type 3 repeat-containing protein | - |
| E0F32_RS05090 () | 928898..935116 | + | 6219 | WP_024478355.1 | DEAD/DEAH box helicase family protein | - |
| E0F32_RS05095 () | 935191..935475 | + | 285 | WP_000969635.1 | hypothetical protein | - |
| E0F32_RS05100 () | 935489..935785 | + | 297 | WP_024478354.1 | hypothetical protein | - |
| E0F32_RS05105 () | 935799..935996 | - | 198 | WP_002876112.1 | hypothetical protein | - |
| E0F32_RS05110 () | 936156..936797 | + | 642 | WP_000933087.1 | hypothetical protein | - |
| E0F32_RS05115 () | 936807..937892 | + | 1086 | WP_000401910.1 | DUF3991 domain-containing protein | - |
| E0F32_RS05120 () | 937943..938176 | + | 234 | WP_000152425.1 | hypothetical protein | - |
| E0F32_RS05125 () | 938173..938556 | + | 384 | WP_002933294.1 | hypothetical protein | - |
| E0F32_RS05130 () | 938594..938866 | + | 273 | WP_024477679.1 | hypothetical protein | - |
| E0F32_RS05135 () | 938937..939413 | + | 477 | WP_000579597.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| E0F32_RS05140 () | 939413..940180 | + | 768 | WP_024477678.1 | zeta toxin family protein | Toxin Detail |
| E0F32_RS05145 () | 940215..941834 | + | 1620 | WP_078133416.1 | DUF4297 domain-containing protein | - |
| E0F32_RS05150 () | 941821..942360 | + | 540 | WP_024477676.1 | hypothetical protein | - |
| E0F32_RS05155 () | 942350..944989 | + | 2640 | WP_078133417.1 | SMC family ATPase | - |
| E0F32_RS05160 () | 945360..945716 | + | 357 | WP_024477674.1 | hypothetical protein | - |
| E0F32_RS05165 () | 945721..946086 | + | 366 | WP_024477673.1 | plasmid mobilization relaxosome protein MobC | - |
| E0F32_RS05170 () | 946073..947902 | + | 1830 | WP_024477672.1 | relaxase/mobilization nuclease domain-containing protein | - |
| E0F32_RS05175 () | 948023..948247 | + | 225 | WP_024477671.1 | helix-turn-helix domain-containing protein | - |
| E0F32_RS05180 () | 948705..950492 | + | 1788 | WP_024477670.1 | hypothetical protein ; Integrase | Integrase |
| E0F32_RS05185 () | 950413..950760 | + | 348 | WP_197097724.1 | 23S rRNA methyltransferase | - |
| E0F32_RS05190 () | 950974..951207 | + | 234 | WP_000710805.1 | hypothetical protein | - |
| E0F32_RS05195 () | 951498..951716 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| E0F32_RS05205 () | 952109..953134 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| E0F32_RS05210 () | 953124..954131 | + | 1008 | WP_001244693.1 | hypothetical protein | VF |
| E0F32_RS05215 () | 954131..955138 | + | 1008 | WP_001180357.1 | hypothetical protein | VF |
| E0F32_RS05220 () | 955138..955932 | + | 795 | WP_000677519.1 | hypothetical protein | VF |
| E0F32_RS05225 () | 956094..957350 | - | 1257 | WP_000436399.1 | ISL3 family transposase IS1167 | Transposase |
| E0F32_RS05230 () | 957743..958132 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| E0F32_RS11455 () | 958098..958412 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| E0F32_RS11555 () | 959096..959257 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| E0F32_RS05245 () | 959349..961028 | + | 1680 | WP_130885941.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| E0F32_RS05250 () | 961296..961862 | + | 567 | WP_000234985.1 | hypothetical protein | - |
| E0F32_RS05255 () | 962184..962372 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| E0F32_RS05260 () | 962434..963249 | + | 816 | WP_000262007.1 | ATP-grasp domain-containing protein | - |
| E0F32_RS05265 () | 963249..964103 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| E0F32_RS05270 () | 964215..965099 | + | 885 | WP_000710115.1 | diacylglycerol kinase family lipid kinase | - |
| E0F32_RS05275 () | 965262..967001 | + | 1740 | WP_000423466.1 | glycoside hydrolase family 13 protein | - |
| E0F32_RS05280 () | 967276..967731 | + | 456 | WP_000500465.1 | hypothetical protein | - |
| E0F32_RS05285 () | 968176..968652 | + | 477 | WP_000579599.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| E0F32_RS05290 () | 968652..969413 | + | 762 | WP_000405365.1 | zeta toxin family protein | Toxin Detail |
| E0F32_RS05295 () | 969441..970597 | + | 1157 | Protein_990 | hypothetical protein | - |
| E0F32_RS05305 () | 971416..971775 | + | 360 | WP_000003745.1 | hypothetical protein | - |
| E0F32_RS05310 () | 971785..972150 | + | 366 | WP_000263051.1 | MobC family plasmid mobilization relaxosome protein | - |
| E0F32_RS05315 () | 972137..974002 | + | 1866 | WP_000261795.1 | relaxase/mobilization nuclease domain-containing protein | - |
| E0F32_RS05320 () | 974047..974901 | - | 855 | WP_000837492.1 | XRE/MutR family transcriptional regulator | - |
| E0F32_RS11350 () | 974981..975043 | + | 63 | WP_133457516.1 | SHP2/SHP3 family peptide pheromone | - |
| E0F32_RS05325 () | 975124..975672 | + | 549 | WP_000059559.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|