MGE detailed information
MGE type: Genomic_island MGE length: 10859 bp
Accession: NZ_LR215729 Location: 2389121..2399979 Organism: Pseudomonas marincola strain YSy11 Replicon: chromosome
Accession: NZ_LR215729 Location: 2389121..2399979 Organism: Pseudomonas marincola strain YSy11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PMYSY11_RS11090 () | 2385546..2386916 | + | 1371 | WP_150549220.1 | xanthine/uracil/vitamin C permease | - |
| PMYSY11_RS11095 () | 2387036..2388808 | + | 1773 | WP_150549221.1 | acyl-CoA dehydrogenase C-terminal domain-containing protein | - |
| PMYSY11_RS11100 () | 2389121..2390806 | - | 1686 | WP_150549222.1 | GMC family oxidoreductase | - |
| PMYSY11_RS11105 () | 2391156..2391293 | - | 138 | WP_172970686.1 | hypothetical protein | - |
| PMYSY11_RS11110 () | 2391591..2393000 | + | 1410 | WP_150549223.1 | Bifunctional ligase/repressor BirA ; Integrase | Integrase |
| PMYSY11_RS11115 () | 2392994..2393287 | - | 294 | WP_150549224.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PMYSY11_RS11120 () | 2393275..2393547 | - | 273 | WP_116801393.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| PMYSY11_RS11125 () | 2393949..2394281 | + | 333 | WP_036992178.1 | hypothetical protein | - |
| PMYSY11_RS11130 () | 2394341..2395309 | + | 969 | WP_150549225.1 | DUF932 domain-containing protein | - |
| PMYSY11_RS11135 () | 2395393..2395797 | - | 405 | WP_150549226.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| PMYSY11_RS11140 () | 2395797..2396027 | - | 231 | WP_003285520.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| PMYSY11_RS11145 () | 2396184..2397188 | + | 1005 | WP_150549227.1 | YqaJ viral recombinase family protein | - |
| PMYSY11_RS11150 () | 2397280..2398230 | + | 951 | WP_150549228.1 | hydrolase or metal-binding protein | - |
| PMYSY11_RS11155 () | 2398202..2398699 | + | 498 | WP_150549229.1 | DNA repair protein RadC | - |
| PMYSY11_RS11160 () | 2398710..2398892 | + | 183 | WP_059319052.1 | hypothetical protein | - |
| PMYSY11_RS11165 () | 2398993..2399979 | - | 987 | WP_150549230.1 | hypothetical protein | - |
| PMYSY11_RS11170 () | 2399976..2402747 | - | 2772 | WP_150549709.1 | hypothetical protein | - |
| PMYSY11_RS11175 () | 2402747..2403346 | - | 600 | WP_057391040.1 | hypothetical protein | - |
| PMYSY11_RS11180 () | 2403343..2404587 | - | 1245 | WP_059319050.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|