MGE detailed information
MGE type: IScluster/Tn MGE length: 24396 bp
Accession: NZ_LR213456 Location: 205558..229953 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: plasmid 2
Accession: NZ_LR213456 Location: 205558..229953 Organism: Shigella flexneri strain AUSMDU00008332 isolate AUSMDU00008332 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E35_RS25115 | 200897..201739 | - | 843 | WP_000931197.1 | polysaccharide deacetylase family protein | - |
| E0E35_RS25125 | 202222..205134 | + | 2913 | WP_171545350.1 | ankyrin repeat domain-containing protein | - |
| E0E35_RS25130 | 205164..205488 | - | 325 | Protein_237 | IS3 family transposase | - |
| E0E35_RS25135 | 205486..205677 | + | 192 | Protein_238 | IS66 family transposase ISCro1 | Transposase |
| E0E35_RS27015 | 205691..205771 | - | 81 | Protein_239 | hypothetical protein | - |
| E0E35_RS25140 | 205812..206292 | - | 481 | Protein_240 | IS3 family transposase IS629 | Transposase |
| E0E35_RS25145 | 206376..207884 | - | 1509 | WP_001189111.1 | group II intron reverse transcriptase/maturase | - |
| E0E35_RS25155 | 208557..209292 | - | 736 | Protein_242 | IS3 family transposase | - |
| E0E35_RS25160 | 209349..210617 | - | 1269 | Protein_243 | IS4 family transposase IS4 | Transposase |
| E0E35_RS25165 | 210680..210946 | - | 267 | Protein_244 | IS66 family transposase ISCro1 | Transposase |
| E0E35_RS25170 | 211303..211893 | - | 591 | WP_000705601.1 | Protein kinase OspG | VF |
| E0E35_RS26480 | 211976..212145 | - | 170 | Protein_246 | type II toxin-antitoxin system toxin YacB | - |
| E0E35_RS25180 | 212145..212414 | - | 270 | Protein_247 | type II toxin-antitoxin system antitoxin YacA | - |
| E0E35_RS25185 | 212622..214259 | - | 1638 | WP_000936806.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| E0E35_RS25195 | 214652..214957 | - | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| E0E35_RS25200 | 214959..215177 | - | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| E0E35_RS25205 | 215713..216666 | - | 954 | Protein_251 | IS66 family transposase ISEc49 | Transposase |
| E0E35_RS25210 | 216722..217419 | + | 698 | WP_227804301.1 | IS1 family transposase IS1X2 | Transposase |
| E0E35_RS25220 | 217645..217920 | - | 276 | WP_000421262.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| E0E35_RS25225 | 217920..218204 | - | 285 | WP_011114774.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| E0E35_RS25235 | 218656..218907 | + | 252 | WP_001381727.1 | transporter | - |
| E0E35_RS25240 | 218957..219166 | + | 210 | Protein_256 | peptidoglycan-binding protein | - |
| E0E35_RS25245 | 219266..219451 | - | 186 | Protein_257 | IS21 family transposase IS100 | Transposase |
| E0E35_RS25250 | 219640..221241 | - | 1602 | WP_011069533.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS25255 | 221261..221608 | - | 348 | WP_000631708.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS25260 | 221605..222279 | - | 675 | WP_004967157.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS25265 | 222359..223401 | - | 1043 | Protein_261 | IS3 family transposase IS2 | Transposase |
| E0E35_RS25270 | 223489..223758 | - | 270 | Protein_262 | IS3 family transposase ISEc48 | Transposase |
| E0E35_RS26285 | 223873..224511 | - | 639 | WP_000607008.1 | hypothetical protein | VF |
| E0E35_RS25280 | 224670..225140 | - | 471 | Protein_264 | IS1 family transposase IS1N | Transposase |
| E0E35_RS25290 | 225339..226013 | + | 675 | WP_001088287.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS25295 | 226010..226360 | + | 351 | WP_005048975.1 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS25300 | 226357..226908 | + | 552 | Protein_267 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS25305 | 226966..228122 | + | 1157 | WP_094081569.1 | IS3 family transposase IS600 | Transposase |
| E0E35_RS25310 | 228164..229225 | + | 1062 | Protein_269 | IS66 family transposase ISSfl3 | Transposase |
| E0E35_RS25315 | 229234..229953 | + | 720 | Protein_270 | IS110 family transposase ISSfl8 | Transposase |
| E0E35_RS25325 | 230292..231062 | - | 771 | WP_001006196.1 | hypothetical protein | - |
| E0E35_RS25330 | 231107..231593 | - | 487 | Protein_272 | DUF1380 family protein | - |
| E0E35_RS25335 | 231553..231774 | - | 222 | WP_001104887.1 | hypothetical protein | - |
| E0E35_RS25340 | 231775..232458 | - | 684 | WP_000086135.1 | DNA methylase | - |
| E0E35_RS25345 | 232522..232833 | - | 312 | WP_011114770.1 | hypothetical protein | - |
| E0E35_RS25350 | 232830..233732 | - | 903 | WP_015683198.1 | DUF1281 domain-containing protein | - |
| E0E35_RS27020 | 233953..234171 | - | 219 | WP_232111827.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|