MGE detailed information
MGE type: Prophage MGE length: 13684 bp
Accession: NZ_LR213452 Location: 2238199..2251882 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Accession: NZ_LR213452 Location: 2238199..2251882 Organism: Shigella flexneri strain AUSMDU00008355 isolate AUSMDU00008355 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E0E33_RS11425 () | 2234712..2235458 | + | 747 | WP_005050098.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
| E0E33_RS11430 () | 2235547..2236233 | + | 687 | WP_000215549.1 | DNA-binding transcriptional regulator YdfH | - |
| E0E33_RS11435 () | 2236411..2236614 | + | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| E0E33_RS11440 () | 2236650..2238110 | - | 1461 | WP_000527804.1 | mannitol dehydrogenase family protein | - |
| E0E33_RS11445 () | 2238199..2239218 | - | 1020 | Protein_2179 | MHS family MFS transporter YdfJ | - |
| E0E33_RS11450 () | 2239280..2240436 | + | 1157 | WP_128599137.1 | IS3 family transposase IS600 | Transposase |
| E0E33_RS11455 () | 2240461..2240640 | - | 180 | WP_000372594.1 | class II holin family protein | - |
| E0E33_RS24025 () | 2240790..2240951 | - | 162 | WP_001323614.1 | hypothetical protein | - |
| E0E33_RS11460 () | 2240948..2241136 | - | 189 | WP_000874243.1 | DUF1737 domain-containing protein | - |
| E0E33_RS11465 () | 2241396..2241731 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| E0E33_RS11470 () | 2242012..2242120 | - | 109 | Protein_2185 | DUF3927 family protein | - |
| E0E33_RS11490 () | 2243041..2243862 | - | 822 | WP_000762884.1 | antitermination protein | - |
| E0E33_RS11495 () | 2243877..2244233 | - | 357 | WP_000904111.1 | RusA family crossover junction endodeoxyribonuclease | - |
| E0E33_RS11500 () | 2244246..2245295 | - | 1050 | WP_001265249.1 | DUF968 domain-containing protein | - |
| E0E33_RS11505 () | 2245297..2245575 | - | 279 | Protein_2189 | hypothetical protein | - |
| E0E33_RS11510 () | 2245678..2245893 | - | 216 | WP_000980986.1 | hypothetical protein | - |
| E0E33_RS11515 () | 2246111..2246266 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| E0E33_RS11520 () | 2246338..2246625 | - | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| E0E33_RS11525 () | 2246625..2246864 | - | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| E0E33_RS11530 () | 2246889..2247194 | + | 306 | WP_071818640.1 | hypothetical protein | - |
| E0E33_RS11535 () | 2247191..2248069 | - | 879 | Protein_2195 | IS3 family transposase ISSd1 | Transposase |
| E0E33_RS11540 () | 2248087..2248784 | - | 698 | Protein_2196 | IS1 family transposase IS1X2 | Transposase |
| E0E33_RS11545 () | 2248841..2249269 | + | 429 | Protein_2197 | Type 1 fimbrin D-mannose specific adhesin | VF |
| E0E33_RS11550 () | 2249603..2251882 | + | 2280 | WP_130862199.1 | acid resistance putative oxidoreductase YdeP | - |
| E0E33_RS11555 () | 2252130..2252333 | + | 204 | WP_000543383.1 | two-component system connector SafA | - |
| E0E33_RS11560 () | 2252401..2253162 | + | 762 | WP_000060475.1 | acid stress response transcriptional regulator YdeO | - |
| E0E33_RS11565 () | 2253564..2253731 | + | 168 | WP_005062520.1 | hypothetical protein | - |
| E0E33_RS11570 () | 2253725..2254422 | - | 698 | Protein_2202 | IS1 family transposase | - |
| E0E33_RS11575 () | 2254456..2254956 | - | 501 | WP_000284792.1 | cupin domain-containing protein | - |
| E0E33_RS11580 () | 2255272..2256036 | + | 765 | WP_000692136.1 | electron transfer flavoprotein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Shigella flexneri 5a str. M90T | Prophage | TA120372 | NZ_CP037923 | 1629251..1643278 | 0.003 |