MGE detailed information
MGE type: Prophage MGE length: 132466 bp
Accession: NZ_LR134536 Location: 1781467..1913932 Organism: Staphylococcus epidermidis strain NCTC13924 Replicon: chromosome
Accession: NZ_LR134536 Location: 1781467..1913932 Organism: Staphylococcus epidermidis strain NCTC13924 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL299_RS08780 () | 1777588..1778541 | - | 954 | WP_002468995.1 | LacI family DNA-binding transcriptional regulator | - |
| EL299_RS08785 () | 1778677..1779927 | - | 1251 | WP_002477475.1 | ammonium transporter | - |
| EL299_RS08790 () | 1780361..1780585 | - | 225 | WP_002469006.1 | sulfurtransferase TusA family protein | - |
| EL299_RS08795 () | 1780637..1781392 | - | 756 | Protein_1649 | YeeE/YedE family protein | - |
| EL299_RS08800 () | 1781467..1783005 | - | 1539 | WP_001260014.1 | hypothetical protein ; Integrase | Integrase |
| EL299_RS08805 () | 1782995..1783576 | - | 582 | WP_002504503.1 | DNA-binding protein | - |
| EL299_RS08810 () | 1783778..1784371 | - | 594 | WP_001130902.1 | RusA family crossover junction endodeoxyribonuclease | - |
| EL299_RS08815 () | 1784355..1784750 | - | 396 | WP_002504504.1 | hypothetical protein | - |
| EL299_RS08820 () | 1784752..1785498 | - | 747 | WP_002504505.1 | NTP pyrophosphohydrolase | - |
| EL299_RS08825 () | 1785511..1785750 | - | 240 | WP_002504506.1 | hypothetical protein | - |
| EL299_RS08830 () | 1785766..1786014 | - | 249 | WP_002504507.1 | thioredoxin family protein | - |
| EL299_RS08835 () | 1786055..1786657 | - | 603 | WP_002504508.1 | AAA family ATPase | - |
| EL299_RS08840 () | 1786685..1787707 | - | 1023 | WP_002504509.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| EL299_RS08845 () | 1787753..1788109 | - | 357 | WP_071813268.1 | ribonucleoside-diphosphate reductase | - |
| EL299_RS08850 () | 1788300..1789124 | - | 825 | WP_002504510.1 | NUMOD4 motif-containing HNH endonuclease | - |
| EL299_RS08855 () | 1789278..1792187 | - | 2910 | WP_002504511.1 | intein-containing class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| EL299_RS08860 () | 1792209..1792655 | - | 447 | WP_002504512.1 | hypothetical protein | - |
| EL299_RS08865 () | 1792655..1793068 | - | 414 | WP_012086002.1 | class Ib ribonucleoside-diphosphate reductase assembly flavoprotein NrdI | - |
| EL299_RS14160 () | 1793098..1793250 | - | 153 | WP_002504514.1 | hypothetical protein | - |
| EL299_RS08870 () | 1793269..1793970 | - | 702 | WP_010959216.1 | hypothetical protein | - |
| EL299_RS08875 () | 1793982..1794491 | - | 510 | WP_002504516.1 | siphovirus Gp157 family protein | - |
| EL299_RS08880 () | 1794617..1795213 | - | 597 | WP_002504517.1 | hypothetical protein | - |
| EL299_RS08885 () | 1795213..1795443 | - | 231 | WP_000824898.1 | hypothetical protein | - |
| EL299_RS08890 () | 1795457..1795639 | - | 183 | WP_000356944.1 | hypothetical protein | - |
| EL299_RS08895 () | 1795642..1795995 | - | 354 | WP_000792728.1 | hypothetical protein | - |
| EL299_RS08900 () | 1796028..1797026 | - | 999 | WP_000598581.1 | DNA cytosine methyltransferase | - |
| EL299_RS08905 () | 1797041..1797727 | - | 687 | WP_002504519.1 | methyltransferase domain-containing protein | - |
| EL299_RS08910 () | 1797717..1797908 | - | 192 | WP_002504520.1 | hypothetical protein | - |
| EL299_RS08915 () | 1797901..1798512 | - | 612 | WP_002504521.1 | nucleoside 2-deoxyribosyltransferase | - |
| EL299_RS08920 () | 1798527..1798709 | - | 183 | WP_002504522.1 | hypothetical protein | - |
| EL299_RS08925 () | 1798709..1798960 | - | 252 | WP_000865652.1 | hypothetical protein | - |
| EL299_RS08930 () | 1798966..1799289 | - | 324 | WP_002504524.1 | hypothetical protein | - |
| EL299_RS08935 () | 1799270..1799557 | - | 288 | WP_002504525.1 | hypothetical protein | - |
| EL299_RS08940 () | 1799550..1799816 | - | 267 | WP_002504526.1 | hypothetical protein | - |
| EL299_RS14165 () | 1799828..1800001 | - | 174 | WP_000119719.1 | hypothetical protein | - |
| EL299_RS08945 () | 1800115..1800504 | - | 390 | WP_002504527.1 | hypothetical protein | - |
| EL299_RS08950 () | 1800592..1801890 | - | 1299 | WP_010959221.1 | ATP-dependent DNA ligase | - |
| EL299_RS08955 () | 1801900..1802214 | - | 315 | WP_002504529.1 | hypothetical protein | - |
| EL299_RS08960 () | 1802352..1802732 | - | 381 | WP_002504530.1 | hypothetical protein | - |
| EL299_RS08965 () | 1802844..1805330 | - | 2487 | WP_002504531.1 | hypothetical protein | - |
| EL299_RS08970 () | 1805793..1807241 | - | 1449 | WP_010959223.1 | PHP domain-containing protein | - |
| EL299_RS08975 () | 1807254..1807628 | - | 375 | WP_002504533.1 | hypothetical protein | - |
| EL299_RS08980 () | 1807794..1808354 | + | 561 | WP_002504534.1 | hypothetical protein | - |
| EL299_RS08985 () | 1808707..1809111 | + | 405 | WP_002504535.1 | YolD-like family protein | - |
| EL299_RS08990 () | 1809359..1810000 | - | 642 | WP_002504537.1 | hypothetical protein | - |
| EL299_RS08995 () | 1810106..1810828 | - | 723 | WP_002504538.1 | hypothetical protein | - |
| EL299_RS09000 () | 1810937..1811737 | - | 801 | WP_000686449.1 | metallophosphoesterase | - |
| EL299_RS09005 () | 1811741..1812235 | - | 495 | WP_010959224.1 | hypothetical protein | - |
| EL299_RS09010 () | 1812292..1812561 | - | 270 | WP_000755772.1 | hypothetical protein | - |
| EL299_RS09015 () | 1812545..1812736 | - | 192 | WP_002504556.1 | hypothetical protein | - |
| EL299_RS09020 () | 1813039..1813434 | - | 396 | WP_002504557.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| EL299_RS09025 () | 1813434..1813664 | - | 231 | WP_002504558.1 | addiction module antitoxin | Antitoxin Detail |
| EL299_RS09030 () | 1813827..1814345 | - | 519 | WP_002504559.1 | metallophosphoesterase | - |
| EL299_RS09035 () | 1814345..1814995 | - | 651 | WP_002504560.1 | hypothetical protein | - |
| EL299_RS09040 () | 1814995..1815312 | - | 318 | WP_002504561.1 | hypothetical protein | - |
| EL299_RS09045 () | 1815305..1816030 | - | 726 | WP_010959229.1 | metallophosphoesterase | - |
| EL299_RS09050 () | 1816030..1816251 | - | 222 | WP_002504563.1 | hypothetical protein | - |
| EL299_RS14170 () | 1816271..1816447 | - | 177 | WP_002504564.1 | hypothetical protein | - |
| EL299_RS09055 () | 1816440..1816982 | - | 543 | WP_002504565.1 | hypothetical protein | - |
| EL299_RS09060 () | 1816998..1817270 | - | 273 | WP_002504566.1 | hypothetical protein | - |
| EL299_RS09065 () | 1817296..1817451 | - | 156 | WP_002504567.1 | transcriptional activator RinB | - |
| EL299_RS09070 () | 1817448..1817732 | - | 285 | WP_002504568.1 | hypothetical protein | - |
| EL299_RS09075 () | 1817748..1817933 | - | 186 | WP_001187008.1 | hypothetical protein | - |
| EL299_RS09080 () | 1817918..1818097 | - | 180 | WP_002504569.1 | hypothetical protein | - |
| EL299_RS09085 () | 1818113..1818595 | - | 483 | WP_002504570.1 | hypothetical protein | - |
| EL299_RS09090 () | 1818597..1818785 | - | 189 | WP_002504571.1 | Lar family restriction alleviation protein | - |
| EL299_RS09095 () | 1818792..1818995 | - | 204 | WP_002504572.1 | hypothetical protein | - |
| EL299_RS09100 () | 1819000..1819266 | - | 267 | WP_002504573.1 | hypothetical protein | - |
| EL299_RS09105 () | 1819288..1819563 | - | 276 | WP_002504574.1 | hypothetical protein | - |
| EL299_RS09110 () | 1819586..1819825 | - | 240 | WP_002504575.1 | hypothetical protein | - |
| EL299_RS09115 () | 1819847..1820071 | - | 225 | WP_000359469.1 | hypothetical protein | - |
| EL299_RS09120 () | 1820077..1820424 | - | 348 | WP_000862563.1 | thermonuclease family protein | - |
| EL299_RS09125 () | 1820421..1820831 | - | 411 | WP_002504576.1 | hypothetical protein | - |
| EL299_RS09130 () | 1820871..1821134 | - | 264 | WP_000312937.1 | hypothetical protein | - |
| EL299_RS09135 () | 1821137..1821445 | - | 309 | WP_002504577.1 | hypothetical protein | - |
| EL299_RS09140 () | 1821737..1822012 | - | 276 | WP_002504579.1 | hypothetical protein | - |
| EL299_RS09145 () | 1822025..1822222 | - | 198 | WP_002504580.1 | hypothetical protein | - |
| EL299_RS09150 () | 1822233..1823279 | - | 1047 | WP_002504581.1 | hypothetical protein | - |
| EL299_RS09155 () | 1823323..1823997 | + | 675 | WP_001106022.1 | IS6 family transposase IS257R1 | Transposase |
| EL299_RS09160 () | 1824053..1824475 | - | 423 | Protein_1725 | DegV family protein | - |
| EL299_RS09165 () | 1824538..1825710 | + | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| EL299_RS09170 () | 1825840..1827279 | - | 1440 | WP_001028141.1 | hypothetical protein | ARG |
| EL299_RS09175 () | 1827280..1827672 | - | 393 | WP_000393259.1 | GNAT family N-acetyltransferase | - |
| EL299_RS09180 () | 1827728..1828900 | - | 1173 | WP_000195429.1 | IS256 family transposase IS256 | Transposase |
| EL299_RS09185 () | 1829034..1829519 | - | 486 | WP_000175735.1 | trimethoprim-resistant dihydrofolate reductase DfrC | - |
| EL299_RS09190 () | 1829561..1830097 | - | 537 | Protein_1731 | thymidylate synthase | - |
| EL299_RS09195 () | 1830154..1830828 | + | 675 | WP_001106019.1 | IS6 family transposase IS257R2 | Transposase |
| EL299_RS09200 () | 1831126..1831863 | - | 738 | WP_010959234.1 | ribonuclease Z | - |
| EL299_RS09205 () | 1832056..1833822 | - | 1767 | WP_010959235.1 | single-stranded DNA-binding protein | - |
| EL299_RS09210 () | 1833825..1834937 | - | 1113 | WP_002504675.1 | hypothetical protein | - |
| EL299_RS09215 () | 1834954..1836486 | - | 1533 | WP_002504676.1 | replicative DNA helicase | - |
| EL299_RS09220 () | 1836508..1837026 | - | 519 | WP_002504677.1 | hypothetical protein | - |
| EL299_RS09225 () | 1837103..1838071 | - | 969 | WP_002504678.1 | ATP-binding protein | - |
| EL299_RS09230 () | 1838195..1839154 | - | 960 | WP_000852323.1 | hypothetical protein | - |
| EL299_RS09235 () | 1839198..1839878 | - | 681 | WP_000668931.1 | hypothetical protein | - |
| EL299_RS09240 () | 1839896..1840384 | - | 489 | WP_002504679.1 | hypothetical protein | - |
| EL299_RS09245 () | 1840400..1840648 | - | 249 | WP_002504680.1 | hypothetical protein | - |
| EL299_RS09250 () | 1840807..1841811 | - | 1005 | WP_002504681.1 | hypothetical protein | - |
| EL299_RS09255 () | 1841823..1843103 | - | 1281 | WP_002504682.1 | hypothetical protein | - |
| EL299_RS09260 () | 1843414..1844457 | - | 1044 | WP_002504683.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL299_RS09265 () | 1845141..1845569 | - | 429 | WP_002504685.1 | hypothetical protein | - |
| EL299_RS09270 () | 1845647..1846168 | - | 522 | WP_012099556.1 | hypothetical protein | - |
| EL299_RS09275 () | 1846168..1846620 | - | 453 | WP_010959239.1 | hypothetical protein | - |
| EL299_RS09280 () | 1846736..1847416 | - | 681 | WP_010959240.1 | hypothetical protein | - |
| EL299_RS09285 () | 1847445..1847708 | - | 264 | WP_002504623.1 | hypothetical protein | - |
| EL299_RS09290 () | 1847801..1848124 | - | 324 | WP_002504624.1 | hypothetical protein | - |
| EL299_RS09295 () | 1848168..1848827 | - | 660 | WP_002504625.1 | antirestriction protein ArdA | - |
| EL299_RS09300 () | 1848980..1849369 | - | 390 | WP_010959241.1 | hypothetical protein | - |
| EL299_RS09305 () | 1849506..1849766 | - | 261 | WP_010959242.1 | hypothetical protein | - |
| EL299_RS09310 () | 1849841..1850056 | - | 216 | WP_002504552.1 | hypothetical protein | - |
| EL299_RS09315 () | 1850236..1850520 | - | 285 | WP_002504554.1 | hypothetical protein | - |
| EL299_RS09325 () | 1854415..1855290 | - | 876 | WP_002504834.1 | hypothetical protein | - |
| EL299_RS09330 () | 1855326..1856147 | - | 822 | Protein_1758 | ATP-binding domain-containing protein | - |
| EL299_RS09335 () | 1856255..1857433 | - | 1179 | WP_104832459.1 | IS110 family transposase ISSep2 | Transposase |
| EL299_RS09345 () | 1857705..1859171 | - | 1467 | Protein_1760 | AAA family ATPase | - |
| EL299_RS09350 () | 1859307..1860803 | + | 1497 | WP_002504833.1 | hypothetical protein | - |
| EL299_RS09355 () | 1861063..1861392 | + | 330 | WP_002504832.1 | HU family DNA-binding protein | - |
| EL299_RS09360 () | 1861418..1861603 | + | 186 | WP_000057341.1 | YonK family protein | - |
| EL299_RS09365 () | 1861612..1862796 | + | 1185 | WP_002504831.1 | hypothetical protein | - |
| EL299_RS09370 () | 1864491..1865375 | + | 885 | WP_001007716.1 | hypothetical protein | - |
| EL299_RS09375 () | 1865368..1867167 | + | 1800 | WP_002504830.1 | terminase family protein | - |
| EL299_RS09380 () | 1867185..1868747 | + | 1563 | WP_000389594.1 | hypothetical protein | - |
| EL299_RS09385 () | 1868740..1870119 | + | 1380 | WP_002504829.1 | hypothetical protein | - |
| EL299_RS09390 () | 1870147..1870587 | + | 441 | WP_002504828.1 | hypothetical protein | - |
| EL299_RS09395 () | 1870626..1871627 | + | 1002 | WP_002504827.1 | hypothetical protein | - |
| EL299_RS09400 () | 1871702..1872253 | + | 552 | WP_000985467.1 | hypothetical protein | - |
| EL299_RS09405 () | 1872271..1872705 | + | 435 | WP_000134539.1 | hypothetical protein | - |
| EL299_RS09410 () | 1872695..1873012 | + | 318 | WP_001086334.1 | hypothetical protein | - |
| EL299_RS09415 () | 1873016..1873681 | + | 666 | WP_000384369.1 | hypothetical protein | - |
| EL299_RS09420 () | 1873671..1874192 | + | 522 | WP_001177112.1 | hypothetical protein | - |
| EL299_RS09425 () | 1874198..1875070 | + | 873 | WP_000391855.1 | hypothetical protein | - |
| EL299_RS09430 () | 1875109..1875900 | + | 792 | WP_002504825.1 | hypothetical protein | - |
| EL299_RS09435 () | 1875984..1876541 | + | 558 | WP_000700062.1 | hypothetical protein | - |
| EL299_RS09440 () | 1876541..1877014 | + | 474 | WP_002504823.1 | hypothetical protein | - |
| EL299_RS09445 () | 1877030..1878046 | + | 1017 | WP_010959245.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL299_RS09450 () | 1878143..1886416 | + | 8274 | WP_012085820.1 | phage tail tape measure protein | - |
| EL299_RS09455 () | 1886438..1888519 | + | 2082 | WP_002504820.1 | hypothetical protein | - |
| EL299_RS09460 () | 1888580..1896625 | + | 8046 | WP_012085822.1 | hypothetical protein | - |
| EL299_RS09465 () | 1896628..1897002 | + | 375 | WP_002504818.1 | hypothetical protein | - |
| EL299_RS14175 () | 1896995..1897162 | + | 168 | WP_002504817.1 | hypothetical protein | - |
| EL299_RS09470 () | 1897204..1899873 | + | 2670 | WP_012085824.1 | tail fiber domain-containing protein | - |
| EL299_RS09475 () | 1899980..1900381 | + | 402 | WP_002504815.1 | hypothetical protein | - |
| EL299_RS09480 () | 1900363..1900875 | + | 513 | WP_002504814.1 | hypothetical protein | - |
| EL299_RS09485 () | 1900897..1901226 | + | 330 | WP_002504813.1 | phage holin | - |
| EL299_RS09490 () | 1901278..1903671 | + | 2394 | WP_002504812.1 | SGNH/GDSL hydrolase family protein | - |
| EL299_RS09495 () | 1903748..1905250 | + | 1503 | WP_002504811.1 | N-acetylmuramoyl-L-alanine amidase | - |
| EL299_RS09500 () | 1905326..1905526 | - | 201 | WP_002504810.1 | hypothetical protein | - |
| EL299_RS14180 () | 1905906..1906082 | - | 177 | WP_002504809.1 | hypothetical protein | - |
| EL299_RS09505 () | 1906221..1907867 | - | 1647 | WP_002504808.1 | hypothetical protein | - |
| EL299_RS09510 () | 1908010..1908615 | - | 606 | WP_002504807.1 | LPXTG cell wall anchor domain-containing protein | - |
| EL299_RS09515 () | 1908933..1909232 | - | 300 | Protein_1796 | YeeE/YedE family protein | - |
| EL299_RS09520 () | 1909319..1909600 | - | 282 | WP_002497516.1 | PH domain-containing protein | - |
| EL299_RS09530 () | 1911016..1911651 | - | 636 | WP_002468998.1 | redox-sensing transcriptional repressor Rex | - |
| EL299_RS09535 () | 1911998..1913932 | + | 1935 | WP_002468991.1 | ABC-F family ATP-binding cassette domain-containing protein | - |
| EL299_RS09540 () | 1914274..1915890 | + | 1617 | WP_002469004.1 | AAA family ATPase | - |
| EL299_RS09545 () | 1915973..1916995 | - | 1023 | WP_002469005.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD | - |
| EL299_RS09550 () | 1916992..1917453 | - | 462 | WP_001829994.1 | ribosomal protein S18-alanine N-acetyltransferase | - |
| EL299_RS09555 () | 1917426..1918088 | - | 663 | WP_002468996.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB | - |
| EL299_RS09560 () | 1918069..1918530 | - | 462 | WP_002469001.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus epidermidis isolate BPH0662 | Prophage | TA10179 | NZ_LT571449 | 1774530..1906238 | 0.001 |