MGE detailed information
MGE type: Prophage MGE length: 62562 bp
Accession: NZ_LR134354 Location: 1660722..1723283 Organism: Bifidobacterium longum subsp. infantis strain NCTC11817 Replicon: chromosome
Accession: NZ_LR134354 Location: 1660722..1723283 Organism: Bifidobacterium longum subsp. infantis strain NCTC11817 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL189_RS08120 () | 1657697..1657957 | + | 261 | WP_012577807.1 | 30S ribosomal protein S20 | - |
| EL189_RS08125 () | 1658169..1658939 | - | 771 | WP_012577808.1 | TRIC cation channel family protein | - |
| EL189_RS08130 () | 1659469..1660368 | - | 900 | WP_014484947.1 | nucleotide pyrophosphohydrolase | - |
| EL189_RS08135 () | 1660722..1662113 | + | 1392 | WP_012577810.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EL189_RS08140 () | 1662204..1662641 | + | 438 | WP_012577811.1 | DUF4065 domain-containing protein | - |
| EL189_RS08145 () | 1662641..1663144 | + | 504 | WP_012577812.1 | hypothetical protein | - |
| EL189_RS08150 () | 1663216..1663836 | - | 621 | WP_012577813.1 | hypothetical protein | - |
| EL189_RS08155 () | 1663899..1664258 | - | 360 | WP_014484948.1 | hypothetical protein | - |
| EL189_RS08160 () | 1664297..1664659 | - | 363 | WP_012577815.1 | hypothetical protein | - |
| EL189_RS08165 () | 1664682..1665044 | - | 363 | WP_012577816.1 | helix-turn-helix domain-containing protein | - |
| EL189_RS08170 () | 1665132..1665407 | + | 276 | WP_041981985.1 | helix-turn-helix domain-containing protein | - |
| EL189_RS08175 () | 1665501..1665686 | - | 186 | WP_041981969.1 | hypothetical protein | - |
| EL189_RS08180 () | 1665719..1665934 | + | 216 | WP_012577818.1 | hypothetical protein | - |
| EL189_RS08185 () | 1666646..1666999 | + | 354 | WP_012577820.1 | hypothetical protein | - |
| EL189_RS08190 () | 1666999..1667277 | + | 279 | WP_012577821.1 | hypothetical protein | - |
| EL189_RS08195 () | 1667261..1667428 | + | 168 | WP_014484951.1 | DivIVA domain-containing protein | - |
| EL189_RS08200 () | 1667425..1668276 | + | 852 | WP_012577822.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| EL189_RS08205 () | 1668267..1668851 | + | 585 | WP_012577823.1 | ERF family protein | - |
| EL189_RS08210 () | 1668841..1669776 | + | 936 | WP_014484952.1 | hypothetical protein | - |
| EL189_RS08215 () | 1669961..1670494 | + | 534 | WP_012577825.1 | single-stranded DNA-binding protein | - |
| EL189_RS08225 () | 1670953..1671894 | + | 942 | WP_012577827.1 | hypothetical protein | - |
| EL189_RS08230 () | 1672195..1672731 | + | 537 | WP_014484954.1 | hypothetical protein | - |
| EL189_RS08235 () | 1672846..1673208 | + | 363 | WP_012577829.1 | hypothetical protein | - |
| EL189_RS08240 () | 1673205..1673450 | + | 246 | WP_012577830.1 | hypothetical protein | - |
| EL189_RS08245 () | 1673450..1673719 | + | 270 | WP_014484955.1 | hypothetical protein | - |
| EL189_RS08250 () | 1673716..1674228 | + | 513 | WP_012577831.1 | hypothetical protein | - |
| EL189_RS08255 () | 1674225..1674437 | + | 213 | WP_014484956.1 | hypothetical protein | - |
| EL189_RS08260 () | 1674427..1674714 | + | 288 | WP_012577832.1 | hypothetical protein | - |
| EL189_RS08265 () | 1674707..1674991 | + | 285 | WP_012577833.1 | hypothetical protein | - |
| EL189_RS13790 () | 1674988..1675152 | + | 165 | WP_007051868.1 | hypothetical protein | - |
| EL189_RS08270 () | 1675149..1675358 | + | 210 | WP_012577834.1 | hypothetical protein | - |
| EL189_RS08275 () | 1675395..1675619 | + | 225 | WP_012577835.1 | WhiB family transcriptional regulator | - |
| EL189_RS08280 () | 1675612..1675902 | + | 291 | WP_012577836.1 | hypothetical protein | - |
| EL189_RS13795 () | 1675880..1676038 | + | 159 | WP_015713523.1 | hypothetical protein | - |
| EL189_RS08285 () | 1676166..1676558 | + | 393 | WP_012577837.1 | hypothetical protein | - |
| EL189_RS08290 () | 1676555..1676926 | + | 372 | WP_012577838.1 | hypothetical protein | - |
| EL189_RS08295 () | 1676936..1677211 | + | 276 | WP_012577839.1 | hypothetical protein | - |
| EL189_RS08300 () | 1677208..1677408 | + | 201 | WP_041981975.1 | hypothetical protein | - |
| EL189_RS08305 () | 1677437..1677676 | + | 240 | WP_012577840.1 | hypothetical protein | - |
| EL189_RS08310 () | 1677679..1678557 | + | 879 | WP_012577841.1 | hypothetical protein | - |
| EL189_RS08315 () | 1678541..1679032 | + | 492 | WP_014484959.1 | hypothetical protein | - |
| EL189_RS08320 () | 1679101..1680012 | + | 912 | WP_012577843.1 | hypothetical protein | - |
| EL189_RS08325 () | 1680009..1680344 | + | 336 | WP_012577844.1 | hypothetical protein | - |
| EL189_RS08330 () | 1680348..1681553 | + | 1206 | WP_012577845.1 | DNA cytosine methyltransferase | - |
| EL189_RS08335 () | 1681775..1682017 | + | 243 | WP_077323823.1 | DNA cytosine methyltransferase | - |
| EL189_RS08340 () | 1682014..1682793 | + | 780 | WP_012577846.1 | phage antirepressor Ant | - |
| EL189_RS08345 () | 1682790..1683047 | + | 258 | WP_012577847.1 | hypothetical protein | - |
| EL189_RS08350 () | 1683044..1683535 | + | 492 | WP_012577848.1 | hypothetical protein | - |
| EL189_RS08355 () | 1683681..1684085 | - | 405 | WP_014484963.1 | hypothetical protein ; Integrase | Integrase |
| EL189_RS08360 () | 1684082..1684342 | - | 261 | WP_012577849.1 | hypothetical protein | - |
| EL189_RS08365 () | 1684497..1684841 | - | 345 | WP_012577850.1 | hypothetical protein | - |
| EL189_RS08370 () | 1684972..1685343 | - | 372 | WP_012577851.1 | hypothetical protein | - |
| EL189_RS08375 () | 1685450..1686205 | - | 756 | WP_012577852.1 | hypothetical protein | - |
| EL189_RS08380 () | 1686202..1686429 | - | 228 | WP_014484964.1 | hypothetical protein | - |
| EL189_RS08385 () | 1686426..1686971 | - | 546 | WP_012577853.1 | hypothetical protein | - |
| EL189_RS08390 () | 1687160..1687528 | - | 369 | WP_012577854.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| EL189_RS08395 () | 1687509..1687793 | - | 285 | WP_012577855.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| EL189_RS08400 () | 1687869..1688168 | - | 300 | WP_012577856.1 | hypothetical protein | - |
| EL189_RS08405 () | 1688256..1688438 | - | 183 | WP_014484966.1 | hypothetical protein | - |
| EL189_RS08410 () | 1688438..1688779 | - | 342 | WP_012577857.1 | hypothetical protein | - |
| EL189_RS08415 () | 1688781..1689566 | - | 786 | WP_012577858.1 | hypothetical protein | - |
| EL189_RS08420 () | 1689765..1690106 | - | 342 | WP_012577859.1 | hypothetical protein | - |
| EL189_RS08425 () | 1690220..1690564 | - | 345 | WP_014484967.1 | hypothetical protein | - |
| EL189_RS13800 () | 1690561..1690722 | - | 162 | WP_155245937.1 | hypothetical protein | - |
| EL189_RS08430 () | 1690812..1691426 | - | 615 | WP_012577862.1 | lysozyme | - |
| EL189_RS08435 () | 1691639..1691866 | - | 228 | WP_025221588.1 | helix-turn-helix domain-containing protein | - |
| EL189_RS08455 () | 1693996..1694334 | + | 339 | WP_014484970.1 | HNH endonuclease | - |
| EL189_RS08460 () | 1694862..1695341 | + | 480 | WP_012577864.1 | hypothetical protein | - |
| EL189_RS08465 () | 1695341..1697239 | + | 1899 | WP_012577865.1 | hypothetical protein | - |
| EL189_RS08470 () | 1697261..1698883 | + | 1623 | WP_012577866.1 | hypothetical protein | - |
| EL189_RS08475 () | 1698892..1699968 | + | 1077 | WP_012577867.1 | hypothetical protein | - |
| EL189_RS08480 () | 1699984..1700619 | + | 636 | WP_012577868.1 | hypothetical protein | - |
| EL189_RS08485 () | 1700650..1701444 | + | 795 | WP_012577869.1 | hypothetical protein | - |
| EL189_RS08490 () | 1701512..1702582 | + | 1071 | WP_012577870.1 | major capsid protein | - |
| EL189_RS08495 () | 1702595..1703026 | + | 432 | WP_012577871.1 | hypothetical protein | - |
| EL189_RS08500 () | 1703034..1703597 | + | 564 | WP_012577872.1 | hypothetical protein | - |
| EL189_RS08505 () | 1703560..1703913 | + | 354 | WP_014484971.1 | hypothetical protein | - |
| EL189_RS08510 () | 1703920..1704378 | + | 459 | WP_012577874.1 | hypothetical protein | - |
| EL189_RS08515 () | 1704447..1705052 | + | 606 | WP_012577875.1 | hypothetical protein | - |
| EL189_RS08520 () | 1705269..1705691 | + | 423 | WP_012577876.1 | hypothetical protein | - |
| EL189_RS08525 () | 1705736..1706074 | + | 339 | WP_113738642.1 | hypothetical protein | - |
| EL189_RS08530 () | 1710604..1710855 | - | 252 | WP_077323825.1 | hypothetical protein | - |
| EL189_RS08535 () | 1710944..1711894 | + | 951 | WP_012577879.1 | hypothetical protein | - |
| EL189_RS08540 () | 1711908..1716056 | + | 4149 | WP_012577880.1 | hypothetical protein | - |
| EL189_RS08545 () | 1716066..1716638 | + | 573 | WP_012577881.1 | hypothetical protein | - |
| EL189_RS13815 () | 1716642..1716812 | + | 171 | WP_012577882.1 | hypothetical protein | - |
| EL189_RS08550 () | 1716887..1717387 | + | 501 | WP_014484973.1 | hypothetical protein | - |
| EL189_RS08555 () | 1717469..1718668 | - | 1200 | WP_012577584.1 | IS110 family transposase ISArsp5 | Transposase |
| EL189_RS08560 () | 1718990..1719499 | + | 510 | WP_012577885.1 | hypothetical protein | - |
| EL189_RS08565 () | 1719525..1719980 | + | 456 | WP_012577886.1 | hypothetical protein | - |
| EL189_RS08570 () | 1720007..1720402 | + | 396 | WP_012577887.1 | hypothetical protein | - |
| EL189_RS08575 () | 1720463..1721695 | + | 1233 | WP_012577888.1 | LysM peptidoglycan-binding domain-containing protein | - |
| EL189_RS08580 () | 1721774..1722040 | + | 267 | WP_012577889.1 | holin | - |
| EL189_RS08590 () | 1722789..1723283 | - | 495 | WP_012577890.1 | hypothetical protein | - |
| EL189_RS08595 () | 1723712..1724839 | - | 1128 | WP_012577891.1 | branched-chain amino acid aminotransferase | - |
| EL189_RS08600 () | 1725064..1725687 | - | 624 | WP_012577892.1 | 50S ribosomal protein L25/general stress protein Ctc | - |
| EL189_RS08610 () | 1726116..1727153 | + | 1038 | WP_012577893.1 | alpha/beta hydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 | Prophage | TA6258 | NC_011593 | 1660928..1723489 | 0 |