MGE detailed information
MGE type: Genomic_island MGE length: 21359 bp
Accession: NZ_LR134354 Location: 1555338..1576696 Organism: Bifidobacterium longum subsp. infantis strain NCTC11817 Replicon: chromosome
Accession: NZ_LR134354 Location: 1555338..1576696 Organism: Bifidobacterium longum subsp. infantis strain NCTC11817 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL189_RS07550 () | 1551251..1551592 | + | 342 | WP_012577722.1 | hypothetical protein | - |
| EL189_RS07555 () | 1551895..1552224 | + | 330 | WP_126386323.1 | hypothetical protein | - |
| EL189_RS07560 () | 1552538..1553743 | + | 1206 | WP_113738609.1 | MFS transporter | - |
| EL189_RS07565 () | 1553875..1554912 | + | 1038 | WP_012577725.1 | tRNA pseudouridine(13) synthase TruD | - |
| EL189_RS13760 () | 1554980..1555459 | + | 480 | WP_158309820.1 | transposase | - |
| EL189_RS07580 () | 1555472..1555792 | - | 321 | WP_012577727.1 | hypothetical protein | - |
| EL189_RS07595 () | 1556201..1557007 | - | 807 | WP_011068121.1 | Abi family protein | - |
| EL189_RS13765 () | 1557170..1557424 | - | 255 | WP_003829406.1 | hypothetical protein | - |
| EL189_RS07620 () | 1558323..1558532 | + | 210 | WP_143247670.1 | hypothetical protein | - |
| EL189_RS07630 () | 1558933..1559928 | - | 996 | WP_012577729.1 | histidine kinase | - |
| EL189_RS07635 () | 1560073..1560767 | - | 695 | Protein_1416 | response regulator transcription factor | - |
| EL189_RS07640 () | 1560893..1561408 | + | 516 | WP_013140733.1 | hypothetical protein | - |
| EL189_RS07645 () | 1561405..1562295 | + | 891 | WP_014484913.1 | hypothetical protein | - |
| EL189_RS07650 () | 1562292..1562972 | + | 681 | WP_003829413.1 | putative ABC transporter ATP-binding protein YknY | VF |
| EL189_RS07655 () | 1562969..1564138 | + | 1170 | WP_012577732.1 | ABC transporter permease | - |
| EL189_RS07660 () | 1564323..1564592 | + | 270 | WP_014484914.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| EL189_RS07665 () | 1564596..1564889 | + | 294 | WP_003831807.1 | type II toxin-antitoxin system YafQ family toxin | Toxin Detail |
| EL189_RS07670 () | 1564947..1565227 | + | 281 | Protein_1423 | hypothetical protein | - |
| EL189_RS07675 () | 1565558..1566109 | + | 552 | WP_012577735.1 | RNA polymerase sigma-H factor | VF |
| EL189_RS07680 () | 1566143..1566970 | + | 828 | WP_012577736.1 | hypothetical protein | - |
| EL189_RS07685 () | 1567102..1567728 | + | 627 | WP_012577737.1 | hypothetical protein | - |
| EL189_RS07690 () | 1567725..1568507 | + | 783 | WP_012577738.1 | hypothetical protein | - |
| EL189_RS07695 () | 1568560..1569435 | + | 876 | WP_003829425.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| EL189_RS07700 () | 1569489..1569887 | + | 399 | WP_003829426.1 | superoxide dismutase | - |
| EL189_RS07705 () | 1569982..1570344 | - | 363 | WP_003829427.1 | hypothetical protein | - |
| EL189_RS07710 () | 1570468..1571343 | - | 876 | WP_014484916.1 | EamA family transporter | - |
| EL189_RS07715 () | 1571547..1572170 | - | 624 | WP_012577740.1 | hypothetical protein | - |
| EL189_RS07720 () | 1572167..1572895 | - | 729 | WP_012577741.1 | hypothetical protein | - |
| EL189_RS07725 () | 1572900..1573556 | - | 657 | WP_003829431.1 | ATP-binding cassette domain-containing protein | - |
| EL189_RS07730 () | 1574072..1575271 | + | 1200 | WP_007056219.1 | IS110 family transposase ISSer1 | Transposase |
| EL189_RS07735 () | 1575463..1576696 | + | 1234 | Protein_1436 | IS30 family transposase | - |
| EL189_RS07740 () | 1576885..1577553 | - | 669 | WP_012577742.1 | response regulator transcription factor | - |
| EL189_RS07745 () | 1577550..1578779 | - | 1230 | WP_003829436.1 | two-component sensor histidine kinase | - |
| EL189_RS07750 () | 1578812..1580236 | - | 1425 | WP_012577744.1 | FtsX-like permease family protein | - |
| EL189_RS07755 () | 1580229..1581131 | - | 903 | WP_012577745.1 | ABC transporter ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 | Genomic island | TA6257 | NC_011593 | 1555544..1576902 | 0 |