MGE detailed information
MGE type: Prophage MGE length: 72782 bp
Accession: NZ_LR134247 Location: 3860192..3932973 Organism: Escherichia coli strain NCTC9040 Replicon: chromosome
Accession: NZ_LR134247 Location: 3860192..3932973 Organism: Escherichia coli strain NCTC9040 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL149_RS19360 () | 3856063..3857388 | + | 1326 | WP_001046307.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| EL149_RS19365 () | 3857497..3857733 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| EL149_RS19370 () | 3857745..3858338 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| EL149_RS19375 () | 3858497..3858625 | - | 129 | Protein_3746 | aldo/keto reductase | - |
| EL149_RS19380 () | 3858928..3859779 | + | 852 | WP_000621009.1 | helix-turn-helix domain-containing protein | - |
| EL149_RS19385 () | 3859872..3860569 | + | 698 | Protein_3748 | IS1 family transposase IS1R | Transposase |
| EL149_RS19390 () | 3860586..3860933 | + | 348 | Protein_3749 | ABC transporter permease subunit | - |
| EL149_RS19395 () | 3860945..3861991 | + | 1047 | WP_000192349.1 | hypothetical protein | VF |
| EL149_RS19400 () | 3862100..3863032 | - | 933 | WP_000081352.1 | homocysteine S-methyltransferase | - |
| EL149_RS19405 () | 3863019..3864422 | - | 1404 | WP_001373486.1 | S-methylmethionine permease | - |
| EL149_RS19410 () | 3864697..3865908 | - | 1212 | WP_000213416.1 | 3-(3-hydroxy-phenyl)propionate transporter MhpT | - |
| EL149_RS19415 () | 3865978..3866991 | - | 1014 | WP_001013515.1 | 4-hydroxy-2-oxovalerate aldolase | - |
| EL149_RS19420 () | 3866988..3867938 | - | 951 | WP_000044264.1 | acetaldehyde dehydrogenase (acetylating) | - |
| EL149_RS19425 () | 3867935..3868678 | - | 744 | WP_126325799.1 | 2-keto-4-pentenoate hydratase | - |
| EL149_RS19430 () | 3868753..3869619 | - | 867 | WP_000222149.1 | alpha/beta fold hydrolase | - |
| EL149_RS19435 () | 3869648..3870601 | - | 954 | WP_000543446.1 | 3-carboxyethylcatechol 2,3-dioxygenase | - |
| EL149_RS19440 () | 3870603..3871985 | - | 1383 | Protein_3759 | bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | - |
| EL149_RS19445 () | 3872050..3873201 | + | 1152 | WP_016236294.1 | IS30 family transposase IS30D | Transposase |
| EL149_RS19450 () | 3873211..3873636 | + | 426 | Protein_3761 | IS3 family transposase | - |
| EL149_RS19460 () | 3874309..3875817 | + | 1509 | WP_001189109.1 | group II intron reverse transcriptase/maturase | - |
| EL149_RS19465 () | 3875898..3876386 | + | 489 | Protein_3763 | IS3 family transposase | - |
| EL149_RS19470 () | 3876284..3877582 | - | 1299 | WP_000342162.1 | IS256 family transposase IS1414 | Transposase |
| EL149_RS19480 () | 3877800..3877964 | - | 165 | Protein_3765 | IS66 family transposase ISPsy43 | Transposase |
| EL149_RS25145 () | 3877909..3878172 | - | 264 | WP_001247776.1 | IS66 family transposase ISPsy43 | Transposase |
| EL149_RS25150 () | 3878187..3878450 | + | 264 | WP_024195370.1 | IS66 family transposase ISPsy43 | Transposase |
| EL149_RS19490 () | 3878680..3878961 | + | 282 | WP_000643630.1 | helix-turn-helix domain-containing protein | - |
| EL149_RS19495 () | 3878996..3879565 | + | 570 | WP_000350437.1 | hypothetical protein | VF |
| EL149_RS19500 () | 3879671..3882520 | + | 2850 | WP_000101613.1 | hypothetical protein | VF |
| EL149_RS19505 () | 3882520..3882711 | + | 192 | WP_001295707.1 | hypothetical protein | - |
| EL149_RS19510 () | 3882772..3884499 | + | 1728 | WP_000412525.1 | ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein | - |
| EL149_RS19515 () | 3884587..3885045 | + | 459 | WP_001275372.1 | hypothetical protein | VF |
| EL149_RS19520 () | 3885068..3885982 | + | 915 | WP_001022485.1 | heat resistance protein YfdX1 | - |
| EL149_RS19525 () | 3886085..3886972 | + | 888 | WP_001005473.1 | heat resistance protein YfdX2 | - |
| EL149_RS19530 () | 3887062..3887673 | + | 612 | WP_001090787.1 | heat resistance membrane protein HdeD-GI | - |
| EL149_RS19535 () | 3887753..3888898 | + | 1146 | WP_001166995.1 | hypothetical protein | - |
| EL149_RS19540 () | 3888888..3889328 | + | 441 | WP_000786817.1 | heat resistance system thioredoxin Trx-GI | - |
| EL149_RS19545 () | 3889332..3891047 | + | 1716 | WP_001295706.1 | heat resistance system K+/H+ antiporter KefB-GI | - |
| EL149_RS19550 () | 3891044..3891541 | + | 498 | WP_000843382.1 | heat resistance protein PsiE-GI | - |
| EL149_RS19555 () | 3891519..3892484 | + | 966 | WP_000196690.1 | M48 family metalloprotease | - |
| EL149_RS19560 () | 3892509..3893660 | + | 1152 | WP_000323727.1 | hypothetical protein | VF |
| EL149_RS19565 () | 3893885..3894454 | - | 570 | Protein_3783 | IS5 family transposase ISThi1 | Transposase |
| EL149_RS19570 () | 3894450..3895144 | - | 695 | Protein_3784 | IS5 family transposase ISThi1 | Transposase |
| EL149_RS19575 () | 3895576..3896439 | + | 864 | WP_001065555.1 | GTPase family protein | - |
| EL149_RS19580 () | 3896531..3897352 | + | 822 | WP_000197387.1 | DUF945 domain-containing protein | - |
| EL149_RS19585 () | 3897569..3898270 | + | 702 | WP_000189411.1 | WYL domain-containing protein | - |
| EL149_RS19590 () | 3898311..3898547 | + | 237 | WP_001144031.1 | hypothetical protein | - |
| EL149_RS19595 () | 3898547..3898990 | + | 444 | WP_000649865.1 | hypothetical protein | - |
| EL149_RS19600 () | 3899013..3899480 | + | 468 | WP_001385283.1 | hypothetical protein | - |
| EL149_RS19605 () | 3899557..3899796 | + | 240 | WP_000194654.1 | DUF905 domain-containing protein | - |
| EL149_RS19610 () | 3899894..3900352 | + | 459 | WP_000211838.1 | antirestriction protein | - |
| EL149_RS19615 () | 3900368..3900844 | + | 477 | WP_000811693.1 | RadC family protein | - |
| EL149_RS19620 () | 3900853..3901074 | + | 222 | WP_126325800.1 | DUF987 domain-containing protein | - |
| EL149_RS19625 () | 3901093..3901410 | + | 318 | WP_000070396.1 | type IV toxin-antitoxin system antitoxin YafW | Antitoxin Detail |
| EL149_RS19630 () | 3901431..3901772 | + | 342 | WP_000854680.1 | type IV toxin-antitoxin system toxin YkfI | Toxin Detail |
| EL149_RS19635 () | 3902371..3902730 | + | 360 | WP_001350215.1 | hypothetical protein | - |
| EL149_RS19640 () | 3902723..3903265 | - | 543 | WP_000284450.1 | plasmid pRiA4b ORF-3 family protein | - |
| EL149_RS19650 () | 3903869..3904150 | - | 282 | WP_000617443.1 | PerC family transcriptional regulator | - |
| EL149_RS19655 () | 3904410..3904865 | + | 456 | WP_000230715.1 | hypothetical protein | - |
| EL149_RS19660 () | 3904945..3905166 | + | 222 | WP_000678608.1 | hypothetical protein | - |
| EL149_RS19670 () | 3905718..3906416 | - | 699 | WP_000594596.1 | hypothetical protein | - |
| EL149_RS19675 () | 3906567..3909287 | - | 2721 | WP_016243488.1 | lytic transglycosylase domain-containing protein | - |
| EL149_RS19680 () | 3909284..3910603 | - | 1320 | WP_016247964.1 | phage DNA ejection protein | - |
| EL149_RS19685 () | 3910603..3911280 | - | 678 | WP_000909176.1 | hypothetical protein | - |
| EL149_RS19690 () | 3911274..3911735 | - | 462 | WP_000420674.1 | DUF2824 family protein | - |
| EL149_RS25155 () | 3911752..3911913 | - | 162 | WP_001018524.1 | hypothetical protein | - |
| EL149_RS19700 () | 3912498..3915254 | - | 2757 | WP_001673422.1 | TOPRIM and DUF927 domain-containing protein | - |
| EL149_RS19705 () | 3915241..3915612 | - | 372 | WP_001673421.1 | hypothetical protein | - |
| EL149_RS19710 () | 3915605..3915946 | - | 342 | WP_000628964.1 | hypothetical protein | - |
| EL149_RS19715 () | 3915957..3916559 | - | 603 | WP_001673420.1 | hypothetical protein | - |
| EL149_RS19720 () | 3916552..3916773 | - | 222 | WP_000181940.1 | hypothetical protein | - |
| EL149_RS19725 () | 3916770..3917033 | - | 264 | WP_126325801.1 | nicotinic acetylcholine receptor subunit beta | - |
| EL149_RS19730 () | 3917030..3917224 | - | 195 | WP_001065738.1 | hypothetical protein | - |
| EL149_RS19735 () | 3917217..3918244 | - | 1028 | Protein_3815 | ash family protein | - |
| EL149_RS19740 () | 3918238..3918420 | - | 183 | WP_000476150.1 | DUF4222 domain-containing protein | - |
| EL149_RS19745 () | 3918413..3919246 | - | 834 | WP_001673419.1 | antA/AntB antirepressor family protein | - |
| EL149_RS19750 () | 3919259..3919690 | - | 432 | WP_000412538.1 | hypothetical protein | - |
| EL149_RS19755 () | 3919690..3919893 | - | 204 | WP_000035054.1 | AlpA family transcriptional regulator | - |
| EL149_RS19765 () | 3920322..3921536 | - | 1215 | WP_126325802.1 | hypothetical protein ; Integrase | Integrase |
| EL149_RS19780 () | 3921892..3923145 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| EL149_RS19785 () | 3923157..3924260 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| EL149_RS19790 () | 3924548..3925603 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| EL149_RS19795 () | 3925642..3926043 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| EL149_RS19800 () | 3926101..3927344 | - | 1244 | Protein_3825 | esterase FrsA | - |
| - () | 3926761..3926841 | - | 81 | NuclAT_11 | - | - |
| - () | 3926761..3926841 | - | 81 | NuclAT_11 | - | - |
| - () | 3926761..3926841 | - | 81 | NuclAT_11 | - | - |
| - () | 3926761..3926841 | - | 81 | NuclAT_11 | - | - |
| EL149_RS19805 () | 3927436..3927894 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| EL149_RS19810 () | 3928155..3929612 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| EL149_RS19815 () | 3929669..3930190 | - | 522 | Protein_3828 | peptide chain release factor H | - |
| EL149_RS19820 () | 3930186..3930392 | - | 207 | Protein_3829 | RtcB family protein | - |
| EL149_RS19825 () | 3930710..3931162 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| EL149_RS19830 () | 3931172..3931570 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| EL149_RS19835 () | 3931573..3931866 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| EL149_RS19840 () | 3931918..3932973 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| EL149_RS19845 () | 3933044..3933967 | - | 924 | WP_001232546.1 | putative lateral flagellar export/assembly protein LafU | - |
| EL149_RS19850 () | 3933970..3934833 | - | 864 | WP_001169518.1 | flagellar motor stator protein MotA | - |
| EL149_RS19855 () | 3934846..3935562 | - | 717 | WP_000938723.1 | FliA/WhiG family RNA polymerase sigma factor | - |
| EL149_RS19860 () | 3935582..3936049 | - | 468 | WP_000725257.1 | flagellar basal body-associated FliL family protein | - |
| EL149_RS19865 () | 3936057..3937118 | - | 1062 | WP_001067475.1 | flagellar hook-length control protein FliK | - |
| EL149_RS19870 () | 3937115..3937426 | - | 312 | WP_000414998.1 | hypothetical protein | - |
| EL149_RS19875 () | 3937431..3937823 | - | 393 | WP_000285319.1 | flagellar export chaperone FliS | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|