MGE detailed information
MGE type: Genomic_island MGE length: 55838 bp
Accession: NZ_LR134236 Location: 3682872..3738709 Organism: Escherichia coli strain NCTC9008 Replicon: chromosome
Accession: NZ_LR134236 Location: 3682872..3738709 Organism: Escherichia coli strain NCTC9008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL127_RS18060 () | 3678589..3679257 | + | 669 | WP_001209097.1 | membrane protein | - |
| EL127_RS18065 () | 3679500..3680195 | - | 696 | WP_000370306.1 | lactate utilization protein C | - |
| EL127_RS18070 () | 3680188..3681615 | - | 1428 | WP_000023907.1 | iron-sulfur cluster-binding protein | - |
| EL127_RS18075 () | 3681626..3682345 | - | 720 | WP_001102119.1 | (Fe-S)-binding protein | - |
| EL127_RS18080 () | 3682872..3683726 | - | 855 | WP_000339587.1 | DNA-binding transcriptional regulator RclR | - |
| EL127_RS18085 () | 3683952..3685277 | + | 1326 | WP_001046317.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| EL127_RS18090 () | 3685386..3685622 | + | 237 | WP_000474075.1 | DUF1471 domain-containing protein | - |
| EL127_RS18095 () | 3685634..3686227 | + | 594 | WP_001306921.1 | reactive chlorine species resistance protein RclC | - |
| EL127_RS18100 () | 3686386..3686514 | - | 129 | Protein_3516 | aldo/keto reductase | - |
| EL127_RS18105 () | 3686817..3687668 | + | 852 | WP_000621009.1 | HTH-type transcriptional activator RhaR | VF |
| EL127_RS18110 () | 3687808..3692064 | - | 4257 | WP_000020223.1 | hypothetical protein | VF |
| EL127_RS18120 () | 3693179..3693280 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| EL127_RS18125 () | 3693643..3693906 | + | 264 | WP_000803999.1 | type B 50S ribosomal protein L31 | - |
| EL127_RS18130 () | 3693906..3694046 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| EL127_RS18135 () | 3694081..3694308 | - | 228 | WP_001147279.1 | hypothetical protein | - |
| EL127_RS18140 () | 3694865..3695562 | - | 698 | Protein_3523 | IS1 family transposase IS1R | Transposase |
| EL127_RS18145 () | 3695716..3696666 | - | 951 | WP_000947155.1 | magnesium/cobalt transporter CorA | - |
| EL127_RS23585 () | 3696818..3696874 | - | 57 | WP_211180520.1 | protein YsgD | - |
| EL127_RS18150 () | 3697036..3697350 | + | 315 | WP_000951129.1 | hypothetical protein | - |
| EL127_RS18155 () | 3697379..3698076 | + | 698 | Protein_3527 | IS1 family transposase IS1R | Transposase |
| EL127_RS18165 () | 3698310..3698537 | + | 228 | WP_001762064.1 | antitoxin VbhA family protein | - |
| EL127_RS18170 () | 3698559..3698771 | - | 213 | WP_001460380.1 | hypothetical protein | - |
| EL127_RS18175 () | 3698841..3700235 | - | 1395 | WP_001460379.1 | P-type conjugative transfer protein TrbL | - |
| EL127_RS23315 () | 3700238..3700411 | - | 174 | WP_015965741.1 | hypothetical protein | - |
| EL127_RS18180 () | 3700423..3701217 | - | 795 | WP_001460378.1 | P-type conjugative transfer protein TrbJ | - |
| EL127_RS18185 () | 3701299..3701652 | - | 354 | WP_001460377.1 | conjugal transfer transcriptional regulator TraJ | - |
| EL127_RS18190 () | 3701935..3702216 | - | 282 | WP_020244701.1 | hypothetical protein | - |
| EL127_RS18195 () | 3703138..3703452 | + | 315 | WP_020246260.1 | HigA family addiction module antidote protein | - |
| EL127_RS18200 () | 3703717..3706206 | - | 2490 | WP_020244573.1 | S8 family peptidase | - |
| EL127_RS18205 () | 3706215..3707201 | - | 987 | WP_001460375.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| EL127_RS18215 () | 3707856..3709109 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| EL127_RS18220 () | 3709121..3710224 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| EL127_RS18225 () | 3710512..3711567 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| EL127_RS18230 () | 3711606..3712007 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| EL127_RS18235 () | 3712065..3713309 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3712725..3712805 | - | 81 | NuclAT_10 | - | - |
| - () | 3712725..3712805 | - | 81 | NuclAT_10 | - | - |
| - () | 3712725..3712805 | - | 81 | NuclAT_10 | - | - |
| - () | 3712725..3712805 | - | 81 | NuclAT_10 | - | - |
| EL127_RS18240 () | 3713401..3713859 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| EL127_RS18245 () | 3714120..3715577 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| EL127_RS18250 () | 3715634..3716155 | - | 522 | Protein_3545 | peptide chain release factor H | - |
| EL127_RS18255 () | 3716154..3716357 | - | 204 | Protein_3546 | RNA ligase RtcB family protein | - |
| EL127_RS18260 () | 3716603..3717055 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| EL127_RS18265 () | 3717065..3717463 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| EL127_RS18270 () | 3717466..3717759 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| EL127_RS18275 () | 3717811..3718866 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| EL127_RS18280 () | 3718937..3719722 | - | 786 | WP_000207549.1 | hypothetical protein | VF |
| EL127_RS18285 () | 3719694..3721406 | + | 1713 | Protein_3552 | hypothetical protein | VF |
| EL127_RS18290 () | 3721622..3722119 | - | 498 | WP_000006261.1 | REP-associated tyrosine transposase RayT | - |
| EL127_RS18295 () | 3722295..3723068 | - | 774 | WP_001353765.1 | hypothetical protein | VF |
| EL127_RS18300 () | 3723254..3723514 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| EL127_RS18305 () | 3723517..3723795 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| EL127_RS18310 () | 3723951..3724691 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| EL127_RS18315 () | 3724662..3725429 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| EL127_RS18320 () | 3725573..3726151 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| EL127_RS18325 () | 3726391..3728835 | + | 2445 | WP_000973083.1 | Crotonobetainyl-CoA dehydrogenase | VF |
| EL127_RS18330 () | 3728878..3729324 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| EL127_RS18335 () | 3729505..3730275 | + | 771 | WP_001118040.1 | 2-oxoglutaramate amidase | - |
| EL127_RS18340 () | 3730326..3730700 | - | 375 | Protein_3563 | ISAs1 family transposase | - |
| EL127_RS18350 () | 3731068..3731765 | - | 698 | Protein_3564 | IS1 family transposase | - |
| EL127_RS18355 () | 3731814..3732659 | + | 846 | Protein_3565 | IS30 family transposase IS30D | Transposase |
| EL127_RS18360 () | 3732666..3733562 | + | 897 | Protein_3566 | IS3 family transposase ISSd1 | Transposase |
| EL127_RS18365 () | 3733675..3734109 | - | 435 | WP_000723071.1 | hypothetical protein | - |
| EL127_RS18370 () | 3734327..3735727 | - | 1401 | WP_001211180.1 | copper resistance membrane spanning protein PcoS | - |
| EL127_RS18375 () | 3735724..3736404 | - | 681 | WP_001188930.1 | Regulator of RpoS | VF |
| EL127_RS18380 () | 3736459..3737388 | - | 930 | WP_000998778.1 | copper resistance inner membrane protein PcoD | - |
| EL127_RS18385 () | 3737393..3737773 | - | 381 | WP_000025662.1 | copper resistance system metallochaperone PcoC | - |
| EL127_RS18390 () | 3737813..3738703 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| EL127_RS18395 () | 3738709..3740526 | - | 1818 | WP_023280993.1 | multicopper oxidase PcoA | - |
| EL127_RS18400 () | 3740761..3741210 | + | 450 | WP_001023257.1 | copper resistance protein | - |
| EL127_RS18405 () | 3741499..3742236 | + | 738 | WP_000287502.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
| EL127_RS18410 () | 3742270..3742467 | - | 198 | WP_000843494.1 | DUF2933 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|