MGE detailed information
MGE type: Genomic_island MGE length: 70579 bp
Accession: NZ_LR134231 Location: 3532130..3602708 Organism: Escherichia coli strain NCTC9087 Replicon: chromosome
Accession: NZ_LR134231 Location: 3532130..3602708 Organism: Escherichia coli strain NCTC9087 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL105_RS17225 () | 3527847..3528515 | + | 669 | WP_001209100.1 | hypothetical protein | - |
| EL105_RS17230 () | 3528758..3529453 | - | 696 | WP_000370307.1 | lactate utilization protein C | - |
| EL105_RS17235 () | 3529446..3530873 | - | 1428 | WP_000023927.1 | iron-sulfur cluster-binding protein | - |
| EL105_RS17240 () | 3530884..3531603 | - | 720 | WP_001102108.1 | (Fe-S)-binding protein | - |
| EL105_RS17245 () | 3532130..3532984 | - | 855 | WP_000339594.1 | DNA-binding transcriptional regulator RclR | - |
| EL105_RS17250 () | 3533210..3534535 | + | 1326 | WP_001046307.1 | pyridine nucleotide-disulfide oxidoreductase | - |
| EL105_RS17255 () | 3534644..3534880 | + | 237 | WP_000474084.1 | DUF1471 domain-containing protein | - |
| EL105_RS17260 () | 3534892..3535485 | + | 594 | WP_001299021.1 | reactive chlorine species resistance protein RclC | - |
| EL105_RS17265 () | 3535644..3535772 | - | 129 | Protein_3360 | aldo/keto reductase | - |
| EL105_RS17270 () | 3536075..3536926 | + | 852 | WP_000621009.1 | Right origin-binding protein | VF |
| EL105_RS17275 () | 3537066..3541322 | - | 4257 | WP_000020219.1 | hypothetical protein | VF |
| EL105_RS17285 () | 3542437..3542538 | + | 102 | WP_000662258.1 | hypothetical protein | - |
| EL105_RS17290 () | 3542902..3543165 | + | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| EL105_RS17295 () | 3543165..3543305 | + | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| EL105_RS17300 () | 3543340..3543567 | - | 228 | WP_001147279.1 | hypothetical protein | - |
| EL105_RS17305 () | 3544391..3544933 | + | 543 | WP_126496436.1 | HTH-type transcriptional regulator EcpR | VF |
| EL105_RS17310 () | 3545008..3545595 | + | 588 | WP_000730972.1 | Common pilus major fimbrillin subunit EcpA | VF |
| EL105_RS17315 () | 3545653..3546321 | + | 669 | WP_000716398.1 | putative fimbrial chaperone EcpB | VF |
| EL105_RS17320 () | 3546347..3548872 | + | 2526 | WP_001131096.1 | putative outer membrane usher protein EcpC | VF |
| EL105_RS17325 () | 3548862..3550505 | + | 1644 | Protein_3371 | Fimbria adhesin EcpD | VF |
| EL105_RS17330 () | 3550474..3551184 | + | 711 | WP_001360105.1 | putative fimbrial chaperone EcpE | VF |
| EL105_RS17335 () | 3551497..3551826 | + | 330 | WP_001303809.1 | YkgJ family cysteine cluster protein | - |
| EL105_RS17340 () | 3552074..3552688 | - | 615 | WP_001019920.1 | YagU family protein | - |
| EL105_RS17345 () | 3553106..3553795 | + | 690 | WP_000070700.1 | aldehyde dehydrogenase iron-sulfur subunit | - |
| EL105_RS17350 () | 3553792..3554748 | + | 957 | WP_000643333.1 | aldehyde oxidoreductase FAD-binding subunit PaoB | - |
| EL105_RS17355 () | 3554745..3556943 | + | 2199 | WP_000667026.1 | aldehyde oxidoreductase molybdenum-binding subunit PaoC | - |
| EL105_RS17360 () | 3556953..3557909 | + | 957 | WP_000121359.1 | molybdenum cofactor insertion chaperone PaoD | - |
| EL105_RS17365 () | 3557960..3558298 | + | 339 | Protein_3379 | LysR family transcriptional regulator | - |
| EL105_RS17370 () | 3558854..3563308 | - | 4455 | WP_063118745.1 | hypothetical protein | - |
| EL105_RS17375 () | 3563846..3564034 | - | 189 | Protein_3381 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EL105_RS17380 () | 3564013..3565008 | + | 996 | Protein_3382 | Tyrosine recombinase XerD ; Integrase | Integrase |
| EL105_RS17390 () | 3565213..3566466 | - | 1254 | WP_000893278.1 | glutamate-5-semialdehyde dehydrogenase | - |
| EL105_RS17395 () | 3566478..3567581 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| EL105_RS17400 () | 3567869..3568924 | + | 1056 | WP_000749863.1 | phosphoporin PhoE | - |
| EL105_RS17405 () | 3568963..3569364 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| EL105_RS17410 () | 3569422..3570666 | - | 1245 | WP_000189532.1 | esterase FrsA | - |
| - () | 3570082..3570162 | - | 81 | NuclAT_12 | - | - |
| - () | 3570082..3570162 | - | 81 | NuclAT_12 | - | - |
| - () | 3570082..3570162 | - | 81 | NuclAT_12 | - | - |
| - () | 3570082..3570162 | - | 81 | NuclAT_12 | - | - |
| EL105_RS17415 () | 3570758..3571216 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| EL105_RS17420 () | 3571477..3572934 | + | 1458 | WP_001292994.1 | cytosol nonspecific dipeptidase | - |
| EL105_RS17425 () | 3572991..3573512 | - | 522 | Protein_3390 | peptide chain release factor H | - |
| EL105_RS17430 () | 3573508..3573714 | - | 207 | Protein_3391 | RtcB family protein | - |
| EL105_RS17435 () | 3574032..3574484 | - | 453 | WP_001059892.1 | GNAT family N-acetyltransferase | - |
| EL105_RS17440 () | 3574494..3574892 | - | 399 | WP_001263489.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| EL105_RS17445 () | 3574895..3575188 | - | 294 | WP_000554758.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| EL105_RS17450 () | 3575240..3576295 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| EL105_RS17455 () | 3576366..3577151 | - | 786 | WP_000207552.1 | Chemotaxis protein LafU | VF |
| EL105_RS17460 () | 3577123..3578835 | + | 1713 | Protein_3397 | Flagellar biosynthesis protein FlhA | VF |
| EL105_RS17465 () | 3579059..3579556 | - | 498 | WP_000006255.1 | REP-associated tyrosine transposase RayT | - |
| EL105_RS17470 () | 3579732..3580481 | - | 750 | WP_000056849.1 | hypothetical protein | VF |
| EL105_RS17475 () | 3580691..3580951 | + | 261 | WP_000729703.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| EL105_RS17480 () | 3580954..3581232 | + | 279 | WP_000615983.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| EL105_RS17485 () | 3581388..3582128 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| EL105_RS17490 () | 3582099..3582866 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| EL105_RS17495 () | 3583072..3583650 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| EL105_RS17500 () | 3583890..3586334 | + | 2445 | WP_000973083.1 | Acyl-coenzyme A dehydrogenase | VF |
| EL105_RS17505 () | 3586377..3586823 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| EL105_RS17510 () | 3587004..3587774 | + | 771 | WP_001118036.1 | 2-oxoglutaramate amidase | - |
| EL105_RS17515 () | 3587815..3588951 | - | 1137 | WP_000420818.1 | ISAs1 family transposase ISEc1 | Transposase |
| EL105_RS22430 () | 3589382..3589773 | - | 392 | Protein_3409 | hypothetical protein | - |
| EL105_RS17525 () | 3589751..3593843 | - | 4093 | Protein_3410 | hypothetical protein | VF |
| EL105_RS17530 () | 3593861..3595162 | + | 1302 | Protein_3411 | hypothetical protein | VF |
| EL105_RS17535 () | 3595173..3596525 | + | 1353 | WP_001087741.1 | hypothetical protein | VF |
| EL105_RS17540 () | 3596549..3597031 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| EL105_RS17545 () | 3597075..3597989 | + | 915 | WP_000908066.1 | hypothetical protein | - |
| EL105_RS17550 () | 3597999..3598478 | + | 480 | WP_001236645.1 | hypothetical protein | - |
| EL105_RS17555 () | 3598615..3599400 | - | 786 | WP_001086141.1 | lipoprotein | - |
| EL105_RS17565 () | 3599937..3600668 | - | 732 | WP_001340895.1 | DNA polymerase III subunit epsilon | - |
| EL105_RS17570 () | 3600733..3601200 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| EL105_RS17575 () | 3601197..3601919 | - | 723 | WP_001326702.1 | class I SAM-dependent methyltransferase | - |
| EL105_RS17580 () | 3601953..3602708 | + | 756 | WP_001052715.1 | hydroxyacylglutathione hydrolase | - |
| EL105_RS17585 () | 3602780..3604138 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| EL105_RS17590 () | 3604186..3604782 | - | 597 | Protein_3422 | methyltransferase domain-containing protein | - |
| EL105_RS17595 () | 3604813..3605613 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| EL105_RS17600 () | 3605854..3606768 | + | 915 | WP_000648572.1 | LysR family transcriptional regulator | - |
| EL105_RS17605 () | 3606765..3607568 | - | 804 | WP_000997010.1 | 2,5-didehydrogluconate reductase DkgB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|