MGE detailed information
MGE type: Genomic_island MGE length: 9349 bp
Accession: NZ_LR134079 Location: 4965027..4974375 Organism: Escherichia coli strain NCTC9112 Replicon: chromosome
Accession: NZ_LR134079 Location: 4965027..4974375 Organism: Escherichia coli strain NCTC9112 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL053_RS24825 () | 4960188..4961489 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| EL053_RS24830 () | 4961605..4961943 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| EL053_RS24835 () | 4961919..4963616 | + | 1698 | WP_000068926.1 | protein-disulfide reductase DsbD | - |
| EL053_RS24840 () | 4963653..4964228 | + | 576 | WP_089627839.1 | transcriptional regulator | - |
| EL053_RS24850 () | 4965027..4966565 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EL053_RS24860 () | 4966930..4968264 | + | 1335 | WP_000092910.1 | cadaverine/lysine antiporter | - |
| EL053_RS24865 () | 4968344..4970491 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| EL053_RS24870 () | 4970550..4972007 | + | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| EL053_RS24875 () | 4972244..4973760 | + | 1517 | Protein_4766 | lysine--tRNA ligase | - |
| EL053_RS24880 () | 4973866..4974051 | - | 186 | WP_089514152.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EL053_RS24885 () | 4974079..4974375 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EL053_RS24890 () | 4974602..4974874 | - | 273 | WP_000405653.1 | N-acetyltransferase | - |
| EL053_RS24895 () | 4974886..4975116 | - | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| EL053_RS24900 () | 4975297..4976928 | + | 1632 | WP_001216470.1 | sensor histidine kinase | - |
| EL053_RS24905 () | 4976925..4977644 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.008 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.008 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.008 |