MGE detailed information
MGE type: Conjugative plasmid MGE length: 52792 bp
Accession: NZ_LR130558 Location: 1..52792 Organism: Escherichia coli strain MS14385 isolate MS14385 Replicon: plasmid 4
Accession: NZ_LR130558 Location: 1..52792 Organism: Escherichia coli strain MS14385 isolate MS14385 Replicon: plasmid 4
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EW040_RS26625 () | 1..858 | + | 858 | WP_000130985.1 | incFII family plasmid replication initiator RepA | - |
| EW040_RS26635 () | 2013..2399 | - | 387 | WP_000673985.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| EW040_RS26640 () | 2396..2620 | - | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| EW040_RS26645 () | 2800..3081 | - | 282 | WP_001290347.1 | membrane protein | - |
| EW040_RS26650 () | 3243..3527 | - | 285 | WP_000930236.1 | hypothetical protein | - |
| EW040_RS26655 () | 3563..3865 | - | 303 | WP_001096541.1 | hypothetical protein | - |
| EW040_RS26660 () | 3955..4614 | - | 660 | WP_016235966.1 | AAA family ATPase | - |
| EW040_RS26665 () | 5166..5489 | + | 324 | WP_016235965.1 | hypothetical protein | - |
| EW040_RS26670 () | 5843..6187 | + | 345 | WP_001146936.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EW040_RS26675 () | 6174..6524 | + | 351 | WP_000127482.1 | addiction module antitoxin | - |
| EW040_RS26685 () | 7358..7873 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| EW040_RS26690 () | 7977..8519 | + | 543 | WP_016235963.1 | hypothetical protein | - |
| EW040_RS26695 () | 8516..8770 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| EW040_RS26700 () | 8767..9009 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| EW040_RS26710 () | 9580..9873 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| EW040_RS26715 () | 10178..10465 | + | 288 | WP_000606467.1 | hypothetical protein | - |
| EW040_RS26720 () | 10893..11126 | + | 234 | WP_000093744.1 | hypothetical protein | - |
| EW040_RS26725 () | 11202..11504 | + | 303 | WP_000379301.1 | hypothetical protein | - |
| EW040_RS26730 () | 11740..11925 | + | 186 | Protein_18 | hypothetical protein | - |
| EW040_RS26735 () | 12036..12857 | + | 822 | WP_016235962.1 | DUF945 domain-containing protein | - |
| EW040_RS26740 () | 13154..13744 | - | 591 | WP_124047292.1 | hypothetical protein | VF |
| EW040_RS26745 () | 14087..14470 | + | 384 | WP_001151562.1 | relaxosome protein TraM | - |
| EW040_RS26750 () | 14664..15350 | + | 687 | WP_000332499.1 | PAS domain-containing protein | - |
| EW040_RS26755 () | 15444..15671 | + | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| EW040_RS26760 () | 15705..16067 | + | 363 | WP_001098993.1 | type IV conjugative transfer system pilin TraA | - |
| EW040_RS26765 () | 16082..16393 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| EW040_RS26770 () | 16415..16981 | + | 567 | WP_016239103.1 | type IV conjugative transfer system protein TraE | - |
| EW040_RS26775 () | 16968..17696 | + | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| EW040_RS26780 () | 17696..19147 | + | 1452 | WP_016239102.1 | conjugal transfer protein TraB | - |
| EW040_RS26785 () | 19116..19703 | + | 588 | WP_001309238.1 | conjugal transfer protein TraP | - |
| EW040_RS26790 () | 19657..20007 | + | 351 | WP_071586941.1 | conjugal transfer protein TrbD | - |
| EW040_RS26795 () | 20007..20522 | + | 516 | WP_000809872.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EW040_RS26800 () | 20657..20878 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| EW040_RS26805 () | 20871..21284 | + | 414 | WP_000549589.1 | hypothetical protein | - |
| EW040_RS26810 () | 21277..21750 | + | 474 | WP_016249716.1 | hypothetical protein | - |
| EW040_RS26815 () | 21831..22049 | + | 219 | WP_000556751.1 | hypothetical protein | - |
| EW040_RS26820 () | 22077..22424 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| EW040_RS26825 () | 22550..25180 | + | 2631 | WP_015075088.1 | type IV secretion system protein TraC | - |
| EW040_RS26830 () | 25177..25563 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| EW040_RS26835 () | 25560..26192 | + | 633 | WP_024220641.1 | type-F conjugative transfer system protein TraW | - |
| EW040_RS26840 () | 26189..27181 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| EW040_RS26845 () | 27208..27516 | + | 309 | WP_001617739.1 | hypothetical protein | - |
| EW040_RS26850 () | 27685..28002 | + | 318 | Protein_42 | TraU family protein | - |
| EW040_RS26855 () | 28032..28337 | + | 306 | WP_000224418.1 | hypothetical protein | - |
| EW040_RS26860 () | 28346..28984 | + | 639 | WP_012881126.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EW040_RS26865 () | 28981..30831 | + | 1851 | WP_000821860.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EW040_RS26870 () | 30858..31115 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| EW040_RS26875 () | 31108..31851 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EW040_RS26880 () | 31865..32209 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| EW040_RS26885 () | 32328..32612 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EW040_RS26890 () | 32599..33144 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EW040_RS26895 () | 33074..33421 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| EW040_RS26900 () | 33369..33794 | + | 426 | WP_001444237.1 | F-type conjugal transfer protein TrbF | - |
| EW040_RS26905 () | 33781..35154 | + | 1374 | WP_000944331.1 | conjugal transfer protein TraH | - |
| EW040_RS26910 () | 35151..37973 | + | 2823 | WP_024220490.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EW040_RS26915 () | 37989..38474 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| EW040_RS26920 () | 38523..39254 | + | 732 | WP_000782451.1 | complement resistance protein TraT | - |
| EW040_RS26925 () | 39457..40194 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| EW040_RS26930 () | 40245..42443 | + | 2199 | WP_129719062.1 | type IV conjugative transfer system coupling protein TraD | - |
| EW040_RS26935 () | 42443..47713 | + | 5271 | WP_129719063.1 | Multifunctional conjugation protein TraI | Relaxase |
| EW040_RS26940 () | 47733..48479 | + | 747 | WP_129719064.1 | conjugal transfer pilus acetylase TraX | - |
| EW040_RS26945 () | 48538..49398 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| EW040_RS26950 () | 49501..50061 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| EW040_RS26955 () | 50190..50402 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| EW040_RS26960 () | 50647..51108 | + | 462 | WP_001233837.1 | thermonuclease family protein | - |
| EW040_RS26965 () | 51154..51363 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| EW040_RS26970 () | 51401..51991 | + | 591 | WP_000766807.1 | DUF2726 domain-containing protein | - |
| EW040_RS26975 () | 52231..52479 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| EW040_RS26985 () | 52726..52792 | + | 67 | WP_032190884.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|