MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 125750 bp
Accession: NZ_LR129840 Location: 959773..1085522 Organism: Streptococcus pneumoniae strain 4496 isolate 4496 Replicon: chromosome
Accession: NZ_LR129840 Location: 959773..1085522 Organism: Streptococcus pneumoniae strain 4496 isolate 4496 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQB41_RS05220 () | 955300..955731 | + | 432 | WP_000942936.1 | GNAT family N-acetyltransferase | - |
| EQB41_RS05225 () | 955793..957049 | + | 1257 | WP_000575514.1 | serine hydroxymethyltransferase | - |
| EQB41_RS05230 () | 957057..958031 | + | 975 | WP_000356089.1 | nucleoid-associated protein | - |
| EQB41_RS05235 () | 958031..958645 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
| EQB41_RS05240 () | 958719..959693 | + | 975 | WP_001227756.1 | DUF1002 domain-containing protein | - |
| EQB41_RS05245 () | 959767..961398 | + | 1632 | WP_000914572.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| EQB41_RS05250 () | 961612..961890 | + | 279 | WP_000710807.1 | hypothetical protein | - |
| EQB41_RS05255 () | 962136..962354 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| EQB41_RS05265 () | 962747..963772 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| EQB41_RS05270 () | 963762..964769 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| EQB41_RS05275 () | 964769..965776 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| EQB41_RS05280 () | 965776..966570 | + | 795 | WP_000677520.1 | Petrobactin import ATP-binding protein FpuD | VF |
| EQB41_RS05285 () | 966958..967347 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| EQB41_RS11840 () | 967313..967627 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| EQB41_RS05295 () | 968311..968472 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| EQB41_RS12055 () | 968564..969412 | + | 849 | WP_197721968.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| EQB41_RS12060 () | 969458..970243 | + | 786 | WP_168960816.1 | recombinase zinc beta ribbon domain-containing protein | - |
| EQB41_RS05305 () | 970511..971077 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| EQB41_RS05310 () | 971400..971588 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| EQB41_RS05315 () | 971650..972408 | + | 759 | WP_000262024.1 | ATP-grasp domain-containing protein | - |
| EQB41_RS05320 () | 972466..973320 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| EQB41_RS05325 () | 973432..974316 | + | 885 | WP_000710109.1 | diacylglycerol kinase family lipid kinase | - |
| EQB41_RS05330 () | 974479..976222 | + | 1744 | Protein_994 | alpha-glycosidase | - |
| EQB41_RS05335 () | 976490..976945 | + | 456 | WP_050245894.1 | hypothetical protein | - |
| EQB41_RS05340 () | 977390..977866 | + | 477 | WP_000579612.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EQB41_RS05345 () | 977866..978627 | + | 762 | WP_127820773.1 | zeta toxin family protein | Toxin Detail |
| EQB41_RS05350 () | 978655..979812 | + | 1158 | WP_001213953.1 | hypothetical protein | - |
| EQB41_RS05355 () | 980631..980990 | + | 360 | WP_000003746.1 | hypothetical protein | - |
| EQB41_RS05360 () | 981066..981364 | + | 299 | Protein_1000 | MobC family plasmid mobilization relaxosome protein | - |
| EQB41_RS12065 () | 981351..983216 | + | 1866 | Protein_1001 | relaxase/mobilization nuclease domain-containing protein | - |
| EQB41_RS05375 () | 983261..984113 | - | 853 | Protein_1002 | Rgg/GadR/MutR family transcriptional regulator | - |
| EQB41_RS11845 () | 984195..984266 | + | 72 | WP_001810617.1 | SHP2/SHP3 family peptide pheromone | - |
| EQB41_RS05380 () | 984370..985239 | + | 870 | WP_127820774.1 | NAD(P)-dependent oxidoreductase | - |
| EQB41_RS05385 () | 985226..985948 | + | 723 | WP_000634194.1 | nucleotidyltransferase | - |
| EQB41_RS05390 () | 985945..986475 | + | 531 | WP_000586362.1 | hypothetical protein | - |
| EQB41_RS05395 () | 986479..987573 | + | 1095 | WP_000490587.1 | hypothetical protein | - |
| EQB41_RS05400 () | 987576..988247 | + | 672 | WP_000620361.1 | hypothetical protein | - |
| EQB41_RS05405 () | 988249..989277 | + | 1029 | WP_000838666.1 | UDP-glucose 4-epimerase | VF |
| EQB41_RS05410 () | 989301..990545 | + | 1245 | WP_000548395.1 | hypothetical protein | - |
| EQB41_RS05415 () | 990595..990954 | + | 360 | WP_001840315.1 | MFS transporter | - |
| EQB41_RS05420 () | 991006..991758 | + | 753 | WP_000560322.1 | MFS transporter | - |
| EQB41_RS05425 () | 992438..992659 | + | 222 | WP_000286245.1 | helix-turn-helix domain-containing protein | - |
| EQB41_RS05435 () | 993107..993409 | + | 303 | Protein_1014 | IS5 family transposase IS1381A | Transposase |
| EQB41_RS05440 () | 993565..994794 | + | 1230 | WP_000703361.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| EQB41_RS05445 () | 994814..997510 | + | 2697 | WP_000058201.1 | phosphoenolpyruvate carboxylase | - |
| EQB41_RS05450 () | 997923..998927 | + | 1005 | WP_000792159.1 | hypothetical protein | VF |
| EQB41_RS05455 () | 998996..999862 | + | 867 | WP_000637238.1 | ABC transporter permease | - |
| EQB41_RS05460 () | 999859..1000617 | + | 759 | WP_000125412.1 | ABC transporter ATP-binding protein | - |
| EQB41_RS05465 () | 1000707..1002467 | + | 1761 | WP_000227893.1 | DNA primase | - |
| EQB41_RS05470 () | 1002470..1003579 | + | 1110 | WP_000201898.1 | RNA polymerase sigma factor RpoD | - |
| EQB41_RS05475 () | 1003593..1003922 | + | 330 | WP_000331928.1 | metal-sulfur cluster assembly factor | - |
| EQB41_RS05480 () | 1004037..1005080 | + | 1044 | WP_000412280.1 | alpha-galactosylglucosyldiacylglycerol synthase | - |
| EQB41_RS05485 () | 1005096..1006421 | + | 1326 | WP_001219427.1 | glycosyltransferase family 4 protein | - |
| EQB41_RS05490 () | 1006452..1006628 | + | 177 | WP_127820775.1 | PspC domain-containing protein | - |
| EQB41_RS05495 () | 1006687..1006821 | + | 135 | WP_000863859.1 | DUF4044 domain-containing protein | - |
| EQB41_RS05500 () | 1006885..1008195 | + | 1311 | WP_050251363.1 | GTPase ObgE | - |
| EQB41_RS05505 () | 1008205..1008363 | + | 159 | WP_001808548.1 | hypothetical protein | - |
| EQB41_RS05510 () | 1009506..1010765 | + | 1260 | WP_050108923.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EQB41_RS05515 () | 1010781..1011332 | + | 552 | WP_001028732.1 | GNAT family N-acetyltransferase | - |
| EQB41_RS05520 () | 1011325..1012602 | + | 1278 | WP_000033830.1 | CBS-HotDog domain-containing transcription factor SpxR | - |
| EQB41_RS05525 () | 1012618..1013478 | + | 861 | WP_000631543.1 | methionyl aminopeptidase | - |
| EQB41_RS05530 () | 1013701..1013811 | + | 111 | Protein_1033 | IS5 family transposase ISSpn7 | Transposase |
| EQB41_RS05535 () | 1013857..1014662 | + | 806 | Protein_1034 | IS5 family transposase | - |
| EQB41_RS05540 () | 1014711..1015175 | + | 465 | WP_074192724.1 | aldose epimerase | - |
| EQB41_RS05545 () | 1015333..1015758 | + | 426 | WP_000029272.1 | galactose-6-phosphate isomerase subunit LacA | - |
| EQB41_RS05550 () | 1015789..1016304 | + | 516 | WP_001216915.1 | galactose-6-phosphate isomerase subunit LacB | - |
| EQB41_RS05555 () | 1016315..1017244 | + | 930 | WP_127820776.1 | tagatose-6-phosphate kinase | - |
| EQB41_RS05560 () | 1017246..1018226 | + | 981 | WP_001229115.1 | tagatose-bisphosphate aldolase | - |
| EQB41_RS05565 () | 1018485..1019102 | + | 618 | WP_000201671.1 | hypothetical protein | - |
| EQB41_RS05570 () | 1019500..1020336 | + | 837 | WP_000285699.1 | transcription antiterminator | - |
| EQB41_RS05575 () | 1020372..1020689 | + | 318 | WP_001078331.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| EQB41_RS05580 () | 1020691..1022385 | + | 1695 | WP_000359338.1 | lactose-specific PTS transporter subunit EIIC | - |
| EQB41_RS05585 () | 1022600..1024006 | + | 1407 | WP_050226379.1 | 6-phospho-beta-galactosidase | - |
| EQB41_RS05590 () | 1024096..1024308 | + | 213 | WP_127820777.1 | DUF3884 family protein | - |
| EQB41_RS05595 () | 1024587..1025348 | - | 762 | WP_000917601.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| EQB41_RS05600 () | 1025530..1026492 | - | 963 | WP_000451369.1 | class 1b ribonucleoside-diphosphate reductase subunit beta | - |
| EQB41_RS05605 () | 1026680..1028839 | - | 2160 | WP_127820778.1 | class 1b ribonucleoside-diphosphate reductase subunit alpha | - |
| EQB41_RS05610 () | 1028920..1029138 | - | 219 | WP_000259249.1 | glutaredoxin-like protein NrdH | - |
| EQB41_RS05615 () | 1029489..1029752 | + | 264 | WP_000146947.1 | phosphocarrier protein HPr | - |
| EQB41_RS05620 () | 1029758..1031491 | + | 1734 | WP_127820779.1 | phosphoenolpyruvate--protein phosphotransferase | - |
| EQB41_RS05625 () | 1031746..1034199 | + | 2454 | WP_000700445.1 | pneumococcal histidine triad protein PhtA | - |
| EQB41_RS05630 () | 1034357..1036861 | + | 2505 | WP_127820780.1 | pneumococcal-type histidine triad protein | - |
| EQB41_RS05635 () | 1037283..1037507 | + | 225 | WP_000443791.1 | PTS fructose transporter subunit IIA | - |
| EQB41_RS05640 () | 1037903..1038616 | + | 714 | WP_000499433.1 | YjjG family noncanonical pyrimidine nucleotidase | - |
| EQB41_RS05645 () | 1038630..1039277 | + | 648 | WP_001824648.1 | hypothetical protein | - |
| EQB41_RS05650 () | 1039413..1040066 | + | 654 | WP_000401328.1 | uracil-DNA glycosylase | - |
| EQB41_RS05655 () | 1040076..1040540 | + | 465 | WP_001135782.1 | 8-oxo-dGTP diphosphatase | - |
| EQB41_RS05660 () | 1040553..1041821 | + | 1269 | WP_033705552.1 | dihydroorotase | - |
| EQB41_RS05665 () | 1041835..1042095 | + | 261 | WP_001105925.1 | hypothetical protein | - |
| EQB41_RS05670 () | 1042106..1043467 | + | 1362 | WP_127820781.1 | sodium-coupled multidrug efflux MATE transporter PdrM | - |
| EQB41_RS05675 () | 1043621..1044589 | + | 969 | WP_000105362.1 | thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha | - |
| EQB41_RS05680 () | 1044605..1045597 | + | 993 | WP_000448724.1 | alpha-ketoacid dehydrogenase subunit beta | - |
| EQB41_RS05685 () | 1045815..1046858 | + | 1044 | WP_000752698.1 | dihydrolipoamide acetyltransferase | - |
| EQB41_RS05690 () | 1046922..1048607 | + | 1686 | WP_001821552.1 | dihydrolipoyl dehydrogenase | - |
| EQB41_RS05695 () | 1048671..1049660 | + | 990 | WP_000873994.1 | Lipoate-protein ligase LplJ | VF |
| EQB41_RS05700 () | 1049733..1050803 | - | 1071 | WP_000817882.1 | Tyrosine recombinase XerS ; Integrase | Integrase |
| EQB41_RS05705 () | 1051034..1051351 | - | 318 | WP_127820782.1 | helix-turn-helix domain-containing protein | - |
| EQB41_RS05710 () | 1051498..1052979 | - | 1482 | Protein_1069 | hypothetical protein | - |
| EQB41_RS05715 () | 1053313..1053780 | - | 468 | WP_127820783.1 | hypothetical protein | - |
| EQB41_RS05720 () | 1054127..1054519 | - | 393 | WP_127820883.1 | hypothetical protein | - |
| EQB41_RS05725 () | 1054648..1055544 | + | 897 | WP_000431196.1 | hypothetical protein | - |
| EQB41_RS05735 () | 1056253..1057803 | - | 1551 | WP_000392561.1 | ClC family H(+)/Cl(-) exchange transporter | - |
| EQB41_RS05740 () | 1057819..1058598 | - | 780 | WP_000201102.1 | ribonuclease HII | - |
| EQB41_RS05745 () | 1058585..1059436 | - | 852 | WP_000201306.1 | Ribosome biogenesis GTPase A | VF |
| EQB41_RS05750 () | 1059518..1061026 | - | 1509 | WP_000291923.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| EQB41_RS05755 () | 1061111..1061344 | - | 234 | WP_001022845.1 | hypothetical protein | - |
| EQB41_RS05760 () | 1061611..1061838 | - | 228 | WP_000919632.1 | helix-turn-helix domain-containing protein | - |
| EQB41_RS05765 () | 1061942..1063771 | - | 1830 | WP_000237134.1 | relaxase/mobilization nuclease domain-containing protein | - |
| EQB41_RS05770 () | 1063758..1064123 | - | 366 | WP_000401236.1 | plasmid mobilization relaxosome protein MobC | - |
| EQB41_RS05775 () | 1064128..1064484 | - | 357 | WP_000827835.1 | hypothetical protein | - |
| EQB41_RS05780 () | 1064779..1065069 | - | 291 | WP_001080184.1 | hypothetical protein | - |
| EQB41_RS05785 () | 1065059..1065424 | - | 366 | WP_000981955.1 | hypothetical protein | - |
| EQB41_RS05790 () | 1065421..1066836 | - | 1416 | WP_000118333.1 | Y-family DNA polymerase | - |
| EQB41_RS05795 () | 1066839..1067522 | - | 684 | WP_000492698.1 | LexA family transcriptional regulator | - |
| EQB41_RS05800 () | 1067778..1068548 | - | 771 | WP_016399580.1 | zeta toxin family protein | Toxin Detail |
| EQB41_RS05805 () | 1068548..1069024 | - | 477 | WP_000579623.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| EQB41_RS05810 () | 1069092..1069364 | - | 273 | WP_000495438.1 | hypothetical protein | - |
| EQB41_RS05815 () | 1069402..1069785 | - | 384 | WP_000159212.1 | hypothetical protein | - |
| EQB41_RS05820 () | 1069782..1070015 | - | 234 | WP_000152419.1 | hypothetical protein | - |
| EQB41_RS05825 () | 1070066..1071151 | - | 1086 | WP_050215984.1 | toprim domain-containing protein | - |
| EQB41_RS05830 () | 1071161..1071802 | - | 642 | WP_050215983.1 | hypothetical protein | - |
| EQB41_RS05835 () | 1071962..1072159 | + | 198 | WP_004249782.1 | hypothetical protein | - |
| EQB41_RS05840 () | 1072173..1072469 | - | 297 | WP_000998891.1 | hypothetical protein | - |
| EQB41_RS05845 () | 1072483..1072767 | - | 285 | WP_000969641.1 | hypothetical protein | - |
| EQB41_RS05850 () | 1072842..1079066 | - | 6225 | WP_197721969.1 | DEAD/DEAH box helicase family protein | - |
| EQB41_RS05855 () | 1079114..1079524 | - | 411 | WP_000387509.1 | thrombospondin type 3 repeat-containing protein | - |
| EQB41_RS05860 () | 1079955..1081271 | - | 1317 | WP_050215981.1 | beta-carotene 15,15'-monooxygenase | - |
| EQB41_RS05865 () | 1081289..1082020 | - | 732 | WP_050215980.1 | ABC transporter ATP-binding protein YxdL | VF |
| EQB41_RS05875 () | 1082459..1082773 | + | 315 | WP_000420682.1 | YdcP family protein | - |
| EQB41_RS05880 () | 1082789..1083175 | + | 387 | WP_000985015.1 | YdcP family protein | - |
| EQB41_RS05885 () | 1083204..1084589 | + | 1386 | WP_000813488.1 | DNA translocase FtsK | - |
| EQB41_RS05890 () | 1084592..1084744 | + | 153 | WP_000879507.1 | hypothetical protein | - |
| EQB41_RS05895 () | 1084767..1085972 | + | 1206 | WP_000398284.1 | replication initiation factor domain-containing protein | - |
| EQB41_RS05900 () | 1086015..1086236 | + | 222 | WP_001009056.1 | hypothetical protein | - |
| EQB41_RS05905 () | 1086353..1086850 | + | 498 | WP_127820785.1 | antirestriction protein ArdA | - |
| EQB41_RS05910 () | 1086825..1087331 | + | 507 | WP_000506270.1 | conjugal transfer protein | - |
| EQB41_RS05915 () | 1087315..1089762 | + | 2448 | WP_000331160.1 | ATP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|