MGE detailed information
MGE type: Genomic_island MGE length: 13756 bp
Accession: NZ_LR027557 Location: 5505006..5518761 Organism: Pseudomonas synxantha strain 10586 Replicon: chromosome
Accession: NZ_LR027557 Location: 5505006..5518761 Organism: Pseudomonas synxantha strain 10586 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KR485_RS24460 | 5500580..5501521 | - | 942 | WP_216090879.1 | folate-binding protein YgfZ | - |
| KR485_RS24465 | 5501661..5501915 | + | 255 | WP_005785986.1 | succinate dehydrogenase assembly factor 2 | - |
| KR485_RS24470 | 5501899..5502345 | + | 447 | WP_216090880.1 | hypothetical protein | - |
| KR485_RS24475 | 5502314..5503930 | - | 1617 | WP_216090881.1 | L-aspartate oxidase | - |
| KR485_RS24480 | 5504392..5504973 | + | 582 | WP_003172477.1 | RNA polymerase sigma factor RpoE | - |
| KR485_RS24485 | 5505006..5505593 | + | 588 | WP_005786011.1 | hypothetical protein | VF |
| KR485_RS24490 | 5505610..5506569 | + | 960 | WP_216090882.1 | hypothetical protein | VF |
| KR485_RS24495 | 5506805..5508241 | + | 1437 | WP_005786015.1 | hypothetical protein | VF |
| KR485_RS24500 | 5508322..5509755 | - | 1434 | WP_032877266.1 | M48 family metalloprotease | - |
| KR485_RS24505 | 5509851..5510090 | + | 240 | WP_078820544.1 | sulfurtransferase TusA family protein | - |
| KR485_RS24510 | 5510110..5510583 | - | 474 | WP_005786022.1 | peroxiredoxin | - |
| KR485_RS24515 | 5510594..5511154 | - | 561 | WP_003189463.1 | glycine cleavage system protein R | - |
| KR485_RS24520 | 5511417..5512295 | + | 879 | WP_032877264.1 | 4-hydroxy-tetrahydrodipicolinate synthase | - |
| KR485_RS24525 | 5512313..5513428 | + | 1116 | WP_078820545.1 | outer membrane protein assembly factor BamC | - |
| KR485_RS24530 | 5513433..5514191 | + | 759 | WP_005786028.1 | MBL fold metallo-hydrolase | - |
| KR485_RS24535 | 5514219..5514932 | + | 714 | WP_005786030.1 | phosphoribosylaminoimidazolesuccinocarboxamide synthase | - |
| KR485_RS24545 | 5515201..5515494 | - | 294 | WP_057022032.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KR485_RS24550 | 5515484..5515723 | - | 240 | WP_014717442.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| KR485_RS24555 | 5516367..5516618 | + | 252 | WP_103733513.1 | DUF3077 domain-containing protein | - |
| KR485_RS24560 | 5516692..5517918 | - | 1227 | WP_032877262.1 | MFS transporter | - |
| KR485_RS24565 | 5518157..5518444 | - | 288 | WP_003189536.1 | NadS family protein | Antitoxin Detail |
| KR485_RS24570 | 5518447..5518761 | - | 315 | WP_057022036.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KR485_RS24575 | 5518867..5519808 | - | 942 | WP_216090883.1 | LysR family transcriptional regulator | - |
| KR485_RS24580 | 5519966..5521282 | + | 1317 | WP_216090884.1 | MFS transporter | - |
| KR485_RS24585 | 5521294..5522526 | + | 1233 | WP_216090885.1 | Zn-dependent hydrolase | - |
| KR485_RS24590 | 5522661..5523698 | + | 1038 | WP_216090886.1 | histone deacetylase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|