MGE detailed information
MGE type: Conjugative plasmid MGE length: 142200 bp
Accession: NZ_LR025097 Location: 1..142200 Organism: Escherichia coli isolate EC-7215 Replicon: plasmid 2
Accession: NZ_LR025097 Location: 1..142200 Organism: Escherichia coli isolate EC-7215 Replicon: plasmid 2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC7215_RS23430 () | 196..498 | + | 303 | WP_072256028.1 | antirestriction protein | - |
| EC7215_RS23435 () | 498..959 | + | 462 | WP_042007484.1 | DUF1380 family protein | - |
| EC7215_RS23440 () | 959..1141 | + | 183 | WP_001027505.1 | hypothetical protein | - |
| EC7215_RS24950 () | 1129..1457 | - | 329 | Protein_3 | pilus assembly protein | - |
| EC7215_RS23460 () | 2135..2365 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| EC7215_RS23465 () | 2417..3778 | + | 1362 | WP_000170681.1 | DUF3560 domain-containing protein | - |
| EC7215_RS23470 () | 3824..4387 | + | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| EC7215_RS23490 () | 5326..5853 | + | 528 | WP_000290793.1 | single-stranded DNA-binding protein | - |
| EC7215_RS23495 () | 5909..6142 | + | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| EC7215_RS23500 () | 6201..8159 | + | 1959 | WP_054444128.1 | ParB/RepB/Spo0J family partition protein | - |
| EC7215_RS23505 () | 8214..8648 | + | 435 | WP_000845895.1 | conjugation system SOS inhibitor PsiB | - |
| EC7215_RS23510 () | 8645..9364 | + | 720 | WP_001276228.1 | plasmid SOS inhibition protein A | - |
| EC7215_RS24885 () | 9376..9564 | - | 189 | WP_001299721.1 | hypothetical protein | - |
| - () | 9376..9600 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 9376..9600 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 9376..9600 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| - () | 9376..9600 | + | 225 | NuclAT_0 | - | Antitoxin Detail |
| EC7215_RS23515 () | 9644..9802 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| EC7215_RS23530 () | 10493..10699 | + | 207 | WP_000547939.1 | hypothetical protein | - |
| EC7215_RS23535 () | 10724..11011 | + | 288 | WP_000107535.1 | hypothetical protein | - |
| EC7215_RS23540 () | 11132..11953 | + | 822 | WP_001234469.1 | DUF945 domain-containing protein | - |
| EC7215_RS23545 () | 12250..12852 | - | 603 | WP_000243709.1 | hypothetical protein | VF |
| EC7215_RS23550 () | 13173..13556 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| EC7215_RS23555 () | 13743..14432 | + | 690 | WP_000283385.1 | conjugal transfer transcriptional regulator TraJ | - |
| EC7215_RS23560 () | 14531..14926 | + | 396 | WP_001309237.1 | conjugal transfer relaxosome protein TraY | - |
| EC7215_RS23565 () | 14959..15324 | + | 366 | WP_000994779.1 | type IV conjugative transfer system pilin TraA | - |
| EC7215_RS23570 () | 15339..15650 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| EC7215_RS23575 () | 15672..16238 | + | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| EC7215_RS23580 () | 16249..16953 | + | 705 | WP_072095570.1 | type-F conjugative transfer system secretin TraK | - |
| EC7215_RS23585 () | 16953..18380 | + | 1428 | WP_000146692.1 | conjugal transfer protein TraB | - |
| EC7215_RS23590 () | 18370..18960 | + | 591 | WP_000002792.1 | conjugal transfer protein TraP | - |
| EC7215_RS23595 () | 18914..19144 | + | 231 | WP_001352845.1 | conjugal transfer protein TrbD | - |
| EC7215_RS23600 () | 19156..19407 | + | 252 | WP_001038342.1 | conjugal transfer protein TrbG | - |
| EC7215_RS23605 () | 19404..19919 | + | 516 | WP_000809841.1 | type IV conjugative transfer system lipoprotein TraV | - |
| EC7215_RS23610 () | 20054..20275 | + | 222 | WP_001278689.1 | conjugal transfer protein TraR | - |
| EC7215_RS23615 () | 20435..23062 | + | 2628 | WP_134159231.1 | type IV secretion system protein TraC | - |
| EC7215_RS23620 () | 23059..23445 | + | 387 | WP_000097319.1 | type-F conjugative transfer system protein TrbI | - |
| EC7215_RS23625 () | 23442..24074 | + | 633 | WP_001203720.1 | type-F conjugative transfer system protein TraW | - |
| EC7215_RS23630 () | 24071..25063 | + | 993 | WP_000830187.1 | conjugal transfer pilus assembly protein TraU | - |
| EC7215_RS23635 () | 25072..25710 | + | 639 | WP_000777688.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| EC7215_RS23640 () | 25707..27515 | + | 1809 | WP_000821847.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| EC7215_RS23645 () | 27542..27799 | + | 258 | WP_000864318.1 | conjugal transfer protein TrbE | - |
| EC7215_RS23650 () | 27792..28535 | + | 744 | WP_001030367.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| EC7215_RS23655 () | 28551..28898 | + | 348 | WP_001287913.1 | conjugal transfer protein TrbA | - |
| EC7215_RS23660 () | 28900..29214 | - | 315 | WP_000415567.1 | hypothetical protein | - |
| EC7215_RS23665 () | 29295..29579 | + | 285 | WP_000624109.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EC7215_RS23670 () | 29566..30111 | + | 546 | WP_000059850.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| EC7215_RS23675 () | 30041..30382 | + | 342 | WP_001443031.1 | P-type conjugative transfer protein TrbJ | - |
| EC7215_RS23680 () | 30336..30749 | + | 414 | WP_072021123.1 | F-type conjugal transfer protein TrbF | - |
| EC7215_RS23685 () | 30749..32122 | + | 1374 | WP_021553026.1 | conjugal transfer protein TraH | - |
| EC7215_RS23690 () | 32119..34935 | + | 2817 | WP_001007054.1 | conjugal transfer mating pair stabilization protein TraG | - |
| EC7215_RS23695 () | 34968..35489 | + | 522 | WP_000632670.1 | conjugal transfer entry exclusion protein TraS | - |
| EC7215_RS23700 () | 35514..36245 | + | 732 | WP_000850422.1 | complement resistance protein TraT | - |
| EC7215_RS23705 () | 36498..38651 | + | 2154 | WP_000009350.1 | type IV conjugative transfer system coupling protein TraD | - |
| EC7215_RS23710 () | 38660..39058 | - | 399 | WP_000911324.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| EC7215_RS23715 () | 39058..39285 | - | 228 | WP_000450532.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| EC7215_RS23720 () | 39367..44637 | + | 5271 | WP_011117356.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| EC7215_RS23725 () | 44657..45403 | + | 747 | WP_000205777.1 | conjugal transfer pilus acetylase TraX | - |
| EC7215_RS23730 () | 45458..46018 | + | 561 | WP_000139359.1 | fertility inhibition protein FinO | - |
| EC7215_RS23735 () | 46156..46368 | + | 213 | WP_012311405.1 | hypothetical protein | - |
| EC7215_RS23740 () | 46611..47072 | + | 462 | WP_001233871.1 | thermonuclease family protein | - |
| EC7215_RS23745 () | 47118..47327 | + | 210 | WP_054444114.1 | hemolysin expression modulator Hha | - |
| EC7215_RS23750 () | 47365..47629 | + | 265 | Protein_58 | hypothetical protein | - |
| EC7215_RS23755 () | 47819..49396 | - | 1578 | WP_001323889.1 | Chromosome partition protein Smc | VF |
| EC7215_RS23760 () | 49539..49889 | - | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| EC7215_RS23765 () | 50092..51105 | - | 1014 | WP_095866698.1 | IS91 family transposase ISAzo26 | Transposase |
| EC7215_RS23770 () | 51261..51734 | + | 474 | WP_004201280.1 | hypothetical protein | ARG |
| EC7215_RS23775 () | 51955..52221 | + | 267 | WP_001144737.1 | plasmid mobilization relaxosome protein MobC | - |
| EC7215_RS23785 () | 52364..53128 | + | 765 | WP_001389365.1 | IS6-like element IS6100 family transposase | - |
| EC7215_RS23800 () | 53621..54205 | - | 585 | WP_001137892.1 | TetR family transcriptional regulator | - |
| EC7215_RS23805 () | 54205..55443 | - | 1239 | WP_000004159.1 | MFS transporter | - |
| EC7215_RS23810 () | 55440..56345 | - | 906 | WP_000219391.1 | hypothetical protein | ARG |
| EC7215_RS23820 () | 56467..57171 | - | 705 | WP_001067855.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EC7215_RS23825 () | 57235..57573 | + | 339 | Protein_69 | Tn3 family transposase TnpR_Tn3 | Transposase |
| EC7215_RS23830 () | 57756..58616 | + | 861 | WP_000027057.1 | hypothetical protein | ARG |
| EC7215_RS23835 () | 58764..58946 | + | 183 | Protein_71 | IS6 family transposase IS15DI | Transposase |
| EC7215_RS23840 () | 59233..60075 | + | 843 | WP_001456218.1 | alpha/beta fold putative hydrolase EstX | - |
| EC7215_RS23845 () | 60171..60779 | + | 609 | WP_000050382.1 | HAD-IB family hydrolase | - |
| EC7215_RS23850 () | 60837..61628 | + | 792 | WP_134159233.1 | hypothetical protein | ARG |
| EC7215_RS23855 () | 61890..62168 | + | 279 | Protein_75 | MFS transporter | - |
| EC7215_RS23860 () | 62217..62921 | + | 705 | WP_012579068.1 | IS6 family transposase IS26 | Transposase |
| EC7215_RS23865 () | 62994..63233 | + | 240 | WP_011264039.1 | macrolide transporter | - |
| EC7215_RS23870 () | 63379..64242 | + | 864 | WP_000612791.1 | SDR family oxidoreductase | - |
| EC7215_RS23875 () | 64280..64525 | + | 246 | WP_001354008.1 | GrpB family protein | - |
| EC7215_RS23880 () | 64994..65785 | + | 792 | WP_000034420.1 | hypothetical protein | ARG |
| EC7215_RS24890 () | 65788..66063 | - | 276 | WP_109023896.1 | hypothetical protein | - |
| EC7215_RS23885 () | 66065..66700 | + | 636 | Protein_82 | IS256 family transposase IS406 | Transposase |
| EC7215_RS23895 () | 66965..67297 | - | 333 | WP_000800531.1 | quaternary ammonium compound efflux SMR transporter QacL | - |
| EC7215_RS23900 () | 67467..68258 | - | 792 | WP_001206316.1 | hypothetical protein | ARG |
| EC7215_RS23905 () | 68351..69352 | - | 1002 | Protein_85 | Bcr/CflA family efflux MFS transporter | - |
| EC7215_RS23910 () | 69407..70111 | - | 705 | WP_012579068.1 | IS6 family transposase IS26 | Transposase |
| EC7215_RS23915 () | 70262..71077 | + | 816 | WP_000018329.1 | hypothetical protein | ARG |
| EC7215_RS23920 () | 71239..72207 | - | 969 | WP_000654804.1 | IS5 family transposase IS903B | Transposase |
| EC7215_RS23925 () | 72240..73171 | + | 932 | Protein_89 | IS3 family transposase IS1133 | Transposase |
| EC7215_RS23930 () | 73303..74106 | + | 804 | WP_001082319.1 | hypothetical protein | ARG |
| EC7215_RS23935 () | 74106..74942 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| EC7215_RS23940 () | 75048..75989 | + | 942 | Protein_92 | IS91 family transposase ISVsa3 | Transposase |
| EC7215_RS24955 () | 76458..76904 | + | 447 | Protein_93 | DUF3363 domain-containing protein | - |
| EC7215_RS23950 () | 77121..78335 | + | 1215 | WP_062896568.1 | Multidrug resistance protein MdtL | ARG |
| EC7215_RS23955 () | 78363..78668 | + | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| EC7215_RS23960 () | 78780..79337 | + | 558 | Protein_96 | IS91 family transposase ISPps1 | Transposase |
| EC7215_RS23965 () | 79371..81206 | - | 1836 | Protein_97 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| EC7215_RS23970 () | 81270..81974 | + | 705 | WP_001067856.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| EC7215_RS23980 () | 82179..82436 | + | 258 | WP_062896471.1 | hypothetical protein | - |
| EC7215_RS23985 () | 82468..83118 | - | 651 | WP_062896472.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| EC7215_RS23990 () | 83224..84423 | + | 1200 | WP_000804064.1 | Multidrug resistance protein MdtG | ARG |
| EC7215_RS23995 () | 84455..85339 | - | 885 | WP_000058717.1 | EamA family transporter | - |
| EC7215_RS24000 () | 85477..85884 | - | 408 | WP_001214976.1 | cysteine hydrolase | - |
| EC7215_RS24005 () | 85873..87624 | + | 1752 | Protein_104 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| EC7215_RS24010 () | 87657..87971 | + | 315 | Protein_105 | DUF2726 domain-containing protein | - |
| EC7215_RS24015 () | 88210..88470 | + | 261 | WP_000083818.1 | replication regulatory protein RepA | - |
| EC7215_RS24025 () | 88696..88770 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| EC7215_RS24030 () | 88763..89620 | + | 858 | WP_000130940.1 | incFII family plasmid replication initiator RepA | - |
| EC7215_RS24050 () | 90535..90804 | + | 270 | WP_032072813.1 | prevent host death protein Phd antitoxin | Antitoxin Detail |
| EC7215_RS24055 () | 90801..91082 | + | 282 | WP_042047819.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| EC7215_RS24060 () | 91128..91976 | + | 849 | WP_054444119.1 | 3'-5' exonuclease | - |
| EC7215_RS24065 () | 92093..92574 | + | 482 | Protein_112 | hypothetical protein | - |
| EC7215_RS24075 () | 92876..93223 | + | 348 | WP_000142437.1 | hypothetical protein | - |
| EC7215_RS24080 () | 93767..94464 | + | 698 | Protein_114 | IS1 family transposase IS1X2 | Transposase |
| EC7215_RS24085 () | 94897..97074 | + | 2178 | WP_001222186.1 | Vitamin B12 transporter BtuB | VF |
| EC7215_RS24090 () | 97119..98075 | - | 957 | WP_000271276.1 | hypothetical protein | VF |
| EC7215_RS24095 () | 98160..99389 | - | 1230 | WP_000933675.1 | hypothetical protein | VF |
| EC7215_RS24100 () | 99493..103152 | - | 3660 | WP_042047930.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| EC7215_RS24105 () | 103292..104407 | - | 1116 | WP_001318220.1 | hypothetical protein | VF |
| EC7215_RS24115 () | 105643..106745 | - | 1103 | Protein_120 | IS481 family transposase ISKpn28 | Transposase |
| EC7215_RS24125 () | 107299..107498 | + | 200 | Protein_121 | lysis system i-spanin subunit Rz | - |
| EC7215_RS24130 () | 107556..107849 | - | 294 | WP_000738422.1 | increased serum survival lipoprotein Iss | - |
| EC7215_RS24135 () | 108476..109712 | + | 1237 | Protein_123 | IS3 family transposase IS2 | Transposase |
| EC7215_RS24145 () | 110935..112129 | + | 1195 | Protein_124 | GTP-binding protein | - |
| EC7215_RS24150 () | 112307..112456 | + | 150 | Protein_125 | IS3 family transposase IS2 | Transposase |
| EC7215_RS24155 () | 112766..114155 | + | 1390 | Protein_126 | ISNCY family transposase ISKpn21 | Transposase |
| EC7215_RS24160 () | 114233..114930 | - | 698 | Protein_127 | IS1 family transposase IS1S | Transposase |
| EC7215_RS24165 () | 114987..115255 | + | 269 | Protein_128 | IS3 family transposase ISLad1 | Transposase |
| EC7215_RS24175 () | 116800..116958 | + | 159 | WP_001312823.1 | integrase core domain-containing protein | - |
| EC7215_RS24190 () | 118231..119184 | + | 954 | WP_000280980.1 | hypothetical protein | VF |
| EC7215_RS24200 () | 119617..120726 | + | 1110 | WP_000771475.1 | SDR family oxidoreductase | - |
| EC7215_RS24205 () | 120795..121697 | + | 903 | WP_001312822.1 | hypothetical protein | VF |
| EC7215_RS24210 () | 122071..122259 | + | 189 | WP_014640565.1 | hypothetical protein | - |
| EC7215_RS24215 () | 122380..123120 | + | 741 | WP_001066954.1 | tyrosine-type recombinase/integrase | - |
| EC7215_RS24220 () | 123405..124382 | - | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| EC7215_RS24230 () | 125128..125451 | + | 324 | Protein_137 | IS21 family transposase IS21 | Transposase |
| EC7215_RS24235 () | 125453..125557 | + | 105 | Protein_138 | AAA family ATPase | - |
| EC7215_RS24895 () | 125618..126131 | + | 514 | Protein_139 | DUF4113 domain-containing protein | - |
| EC7215_RS24250 () | 126311..127008 | - | 698 | Protein_140 | IS1 family transposase IS1S | Transposase |
| EC7215_RS24260 () | 127364..128278 | + | 915 | WP_000949004.1 | hypothetical protein | VF |
| EC7215_RS24265 () | 128278..129105 | + | 828 | WP_000983710.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| EC7215_RS24270 () | 129102..129959 | + | 858 | WP_000992806.1 | hypothetical protein | ARG |
| EC7215_RS24275 () | 129956..130813 | + | 858 | WP_000968140.1 | hypothetical protein | ARG |
| EC7215_RS24280 () | 131048..131305 | - | 258 | Protein_145 | Tn3 family transposase | - |
| EC7215_RS24285 () | 131303..131434 | + | 132 | Protein_146 | phosphopyruvate hydratase | - |
| EC7215_RS24290 () | 131431..131658 | - | 228 | Protein_147 | malate dehydrogenase | - |
| EC7215_RS24300 () | 132098..132577 | - | 480 | WP_000190053.1 | hypothetical protein | - |
| EC7215_RS24305 () | 132695..133144 | + | 450 | WP_000238252.1 | hypothetical protein | - |
| EC7215_RS24310 () | 133753..135255 | + | 1503 | WP_000715078.1 | hypothetical protein | - |
| EC7215_RS24315 () | 135411..136108 | + | 698 | Protein_151 | IS1 family transposase IS1R | Transposase |
| EC7215_RS24320 () | 136408..137574 | + | 1167 | WP_001238646.1 | hypothetical protein | VF |
| EC7215_RS24325 () | 137574..138545 | + | 972 | WP_000817028.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| EC7215_RS24960 () | 139357..139695 | + | 339 | WP_001513511.1 | hypothetical protein | - |
| EC7215_RS24340 () | 139764..140096 | + | 333 | Protein_155 | hypothetical protein | - |
| EC7215_RS24345 () | 140150..140847 | + | 698 | Protein_156 | IS1 family transposase | - |
| EC7215_RS24350 () | 140900..141871 | - | 972 | WP_000082154.1 | IS110 family transposase ISEc32 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|