MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NZ_LR025096 Location: 489923..499273 Organism: Escherichia coli isolate EC-7215 Replicon: chromosome
Accession: NZ_LR025096 Location: 489923..499273 Organism: Escherichia coli isolate EC-7215 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EC7215_RS02245 () | 486654..487373 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| EC7215_RS02250 () | 487370..489001 | - | 1632 | WP_134159155.1 | sensor histidine kinase | - |
| EC7215_RS02255 () | 489182..489412 | + | 231 | WP_000371699.1 | (4Fe-4S)-binding protein | - |
| EC7215_RS02260 () | 489424..489696 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| EC7215_RS02265 () | 489923..490219 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| EC7215_RS02270 () | 490247..490420 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| EC7215_RS02275 () | 490539..492056 | - | 1518 | WP_001295063.1 | lysine--tRNA ligase | - |
| EC7215_RS02280 () | 492293..493750 | - | 1458 | WP_000856841.1 | dipeptide/tripeptide permease DtpC | - |
| EC7215_RS02285 () | 493809..495956 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| EC7215_RS02290 () | 496036..497370 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| EC7215_RS02295 () | 497735..499273 | - | 1539 | WP_001187182.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| EC7215_RS02305 () | 500072..500647 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| EC7215_RS02310 () | 500684..502381 | - | 1698 | WP_000068966.1 | protein-disulfide reductase DsbD | - |
| EC7215_RS02315 () | 502357..502695 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| EC7215_RS02320 () | 502811..504112 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |