MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 60716 bp
Accession: NZ_LN681227 Location: 2878955..2939670 Organism: Xenorhabdus nematophila AN6/1 Replicon: chromosome
Accession: NZ_LN681227 Location: 2878955..2939670 Organism: Xenorhabdus nematophila AN6/1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XNC2_RS12005 () | 2874486..2875370 | + | 885 | WP_013184669.1 | IS982 family transposase | - |
| XNC2_RS22880 () | 2875394..2875519 | - | 126 | Protein_2381 | IS110 family transposase | - |
| XNC2_RS12010 () | 2875688..2876611 | + | 924 | Protein_2382 | IS630 family transposase | - |
| XNC2_RS12015 () | 2877176..2878059 | + | 884 | Protein_2383 | LysR family transcriptional regulator | - |
| XNC2_RS12020 () | 2878212..2879144 | - | 933 | Protein_2384 | NupC/NupG family nucleoside CNT transporter | - |
| XNC2_RS22260 () | 2879159..2880630 | - | 1472 | Protein_2385 | IS3 family transposase IS1240 | Transposase |
| XNC2_RS23485 () | 2880867..2881091 | + | 225 | WP_010846802.1 | hypothetical protein | - |
| XNC2_RS20875 () | 2881215..2882086 | + | 872 | Protein_2387 | IS630 family transposase ISCARN44 | Transposase |
| XNC2_RS12045 () | 2882416..2882841 | - | 426 | WP_012987825.1 | type II toxin-antitoxin system VapC family toxin | - |
| XNC2_RS12050 () | 2882841..2883095 | - | 255 | WP_010846804.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| XNC2_RS12055 () | 2883320..2883649 | + | 330 | WP_010846805.1 | type I toxin-antitoxin system SymE family toxin | - |
| XNC2_RS12060 () | 2883790..2884128 | + | 339 | WP_010846806.1 | SymE family type I addiction module toxin | - |
| XNC2_RS12065 () | 2884231..2884518 | + | 288 | WP_013184681.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XNC2_RS12070 () | 2884529..2884813 | + | 285 | WP_010846808.1 | putative addiction module antidote protein | Antitoxin Detail |
| XNC2_RS12075 () | 2884896..2885279 | - | 384 | WP_013184682.1 | hypothetical protein | - |
| XNC2_RS12080 () | 2885400..2885609 | - | 210 | WP_013184683.1 | hypothetical protein | - |
| XNC2_RS12085 () | 2885820..2886134 | - | 315 | WP_013184684.1 | hypothetical protein | - |
| XNC2_RS12090 () | 2886138..2886662 | - | 525 | WP_013184685.1 | hypothetical protein | - |
| XNC2_RS23490 () | 2886666..2886776 | - | 111 | Protein_2398 | RHS repeat protein | - |
| XNC2_RS12105 () | 2887274..2887465 | - | 192 | WP_143767649.1 | hypothetical protein | - |
| XNC2_RS12110 () | 2887495..2888496 | - | 1002 | WP_013184689.1 | Tyrosine recombinase XerC | VF |
| XNC2_RS12115 () | 2888729..2891173 | - | 2445 | Protein_2401 | DNA primase | - |
| XNC2_RS12120 () | 2891304..2891645 | + | 342 | WP_038251542.1 | helix-turn-helix transcriptional regulator | - |
| XNC2_RS12125 () | 2891732..2892052 | + | 321 | WP_013184691.1 | type I toxin-antitoxin system SymE family toxin | - |
| XNC2_RS12130 () | 2892122..2892574 | - | 453 | WP_013184692.1 | NADAR family protein | - |
| XNC2_RS12135 () | 2892571..2892909 | - | 339 | WP_013184693.1 | hypothetical protein | - |
| XNC2_RS23310 () | 2893338..2893421 | - | 84 | Protein_2406 | RHS repeat protein | - |
| XNC2_RS12145 () | 2893484..2893765 | - | 282 | WP_156148026.1 | hypothetical protein | - |
| XNC2_RS12155 () | 2894061..2894286 | - | 226 | Protein_2408 | hypothetical protein | - |
| XNC2_RS12160 () | 2894304..2895332 | - | 1029 | WP_013184698.1 | IS91 family transposase ISAzo26 | Transposase |
| XNC2_RS22885 () | 2895345..2895503 | + | 159 | WP_156148027.1 | hypothetical protein | - |
| XNC2_RS12165 () | 2895560..2898322 | - | 2763 | WP_013184700.1 | toprim domain-containing protein | - |
| XNC2_RS12170 () | 2898453..2898794 | + | 342 | WP_038251542.1 | helix-turn-helix transcriptional regulator | - |
| XNC2_RS12175 () | 2898881..2899201 | + | 321 | WP_013184701.1 | type I toxin-antitoxin system SymE family toxin | - |
| XNC2_RS12180 () | 2899283..2899510 | - | 228 | WP_013184702.1 | hypothetical protein | - |
| XNC2_RS12185 () | 2899512..2904099 | - | 4588 | Protein_2415 | RHS repeat protein | - |
| XNC2_RS12190 () | 2904241..2904597 | - | 357 | WP_010846820.1 | DUF4150 domain-containing protein | - |
| XNC2_RS12195 () | 2904590..2905807 | - | 1218 | WP_013184703.1 | DUF2169 domain-containing protein | - |
| XNC2_RS12200 () | 2905823..2907937 | - | 2115 | WP_013183865.1 | hypothetical protein | VF |
| XNC2_RS21525 () | 2908672..2909106 | - | 435 | Protein_2419 | site-specific integrase | - |
| XNC2_RS12205 () | 2909136..2909897 | - | 762 | WP_013184705.1 | IS5 family transposase ISSod6 | Transposase |
| XNC2_RS12210 () | 2910050..2910508 | - | 459 | WP_013184706.1 | hypothetical protein | - |
| XNC2_RS12215 () | 2910707..2911147 | - | 441 | WP_013184707.1 | hypothetical protein | - |
| XNC2_RS12220 () | 2911225..2912163 | - | 939 | WP_013184708.1 | hypothetical protein | - |
| XNC2_RS12225 () | 2912160..2913488 | - | 1329 | Protein_2424 | hypothetical protein | VF |
| XNC2_RS12230 () | 2913589..2914542 | - | 954 | WP_013184710.1 | hypothetical protein | - |
| XNC2_RS12235 () | 2914539..2920331 | - | 5793 | WP_013184711.1 | type IV secretion protein Rhs | - |
| XNC2_RS12240 () | 2920392..2920886 | - | 495 | WP_013184712.1 | hypothetical protein | - |
| XNC2_RS23315 () | 2921336..2921470 | + | 135 | Protein_2428 | IS30 family transposase ISPlu1 | Transposase |
| XNC2_RS12245 () | 2921619..2922020 | + | 402 | WP_013184714.1 | hypothetical protein | - |
| XNC2_RS22890 () | 2922031..2922693 | + | 663 | WP_013184715.1 | hypothetical protein | - |
| XNC2_RS12255 () | 2922726..2923001 | - | 276 | Protein_2431 | IS200-IS605 family transposase ISCaa10 | Transposase |
| XNC2_RS12260 () | 2923030..2924600 | - | 1571 | Protein_2432 | IS66 family transposase ISCro1 | Transposase |
| XNC2_RS12265 () | 2924620..2924967 | - | 348 | WP_041573712.1 | IS66 family transposase ISCro1 | Transposase |
| XNC2_RS12270 () | 2924967..2925599 | - | 633 | WP_013184718.1 | IS66 family transposase ISCro1 | Transposase |
| XNC2_RS12275 () | 2925807..2926829 | + | 1023 | WP_013184720.1 | IS110 family transposase ISSde4 | Transposase |
| XNC2_RS22265 () | 2927143..2927498 | + | 356 | Protein_2436 | hypothetical protein | - |
| XNC2_RS12280 () | 2927779..2931750 | + | 3972 | WP_143767681.1 | NERD domain-containing protein | - |
| XNC2_RS12285 () | 2931736..2932704 | - | 969 | WP_013184723.1 | IS110 family transposase IS621 | Transposase |
| XNC2_RS22895 () | 2932789..2933073 | + | 285 | WP_013184725.1 | hypothetical protein | - |
| XNC2_RS21545 () | 2933126..2933284 | + | 159 | Protein_2440 | IS1595 family transposase | - |
| XNC2_RS12295 () | 2933478..2933825 | - | 348 | Protein_2441 | IS5 family transposase ISPlu14 | Transposase |
| XNC2_RS12300 () | 2933879..2934202 | + | 324 | WP_013183332.1 | IS630 family transposase ISSsu3 | Transposase |
| XNC2_RS12305 () | 2934234..2934710 | + | 477 | WP_197541260.1 | IS630 family transposase ISOt3 | Transposase |
| XNC2_RS12310 () | 2934727..2935659 | + | 933 | Protein_2444 | IS66 family transposase ISCro1 | Transposase |
| XNC2_RS20880 () | 2935801..2936922 | + | 1122 | Protein_2445 | ISAs1 family transposase ISTha2 | Transposase |
| XNC2_RS12320 () | 2937284..2937820 | + | 537 | WP_013184731.1 | gluconokinase | - |
| XNC2_RS12325 () | 2937820..2939157 | + | 1338 | WP_010848884.1 | gluconate transporter | - |
| XNC2_RS12330 () | 2939248..2939532 | - | 285 | WP_010848883.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XNC2_RS12335 () | 2939522..2939773 | - | 252 | WP_010848882.1 | plasmid stabilization protein | - |
| XNC2_RS23495 () | 2939854..2940180 | - | 327 | WP_050986632.1 | hypothetical protein | - |
| XNC2_RS12345 () | 2940487..2941575 | - | 1089 | WP_013184732.1 | DUF459 domain-containing protein | - |
| XNC2_RS12350 () | 2941562..2942979 | - | 1418 | Protein_2452 | MBOAT family protein | - |
| XNC2_RS12355 () | 2943172..2943948 | - | 777 | WP_010848877.1 | protein bax | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xenorhabdus nematophila ATCC 19061 | Integrative and Conjugative Element | TA24800 | NC_014228 | 2879260..2940004 | 0 |