NZ_LN6812272312102..2348646

MGE detailed information

MGE type: Integrative_Conjugative_Elements        MGE length: 36545 bp
Accession: NZ_LN681227        Location: 2312102..2348646         Organism: Xenorhabdus nematophila AN6/1       Replicon: chromosome


Gene structure

The 5 kb flanking regions of this MGE are displayed.

XNC2_RS09985XNC2_RS10000XNC2_RS10005XNC2_RS10010XNC2_RS10015XNC2_RS10020XNC2_RS10025XNC2_RS10040XNC2_RS10045XNC2_RS10050XNC2_RS10055XNC2_RS10060XNC2_RS20860XNC2_RS10075XNC2_RS10080XNC2_RS10115XNC2_RS10125XNC2_RS22220XNC2_RS10160XNC2_RS10165XNC2_RS09945XNC2_RS09950XNC2_RS09955XNC2_RS09960XNC2_RS23290XNC2_RS09965XNC2_RS09970XNC2_RS09975XNC2_RS22820XNC2_RS23480XNC2_RS09990XNC2_RS09995XNC2_RS10030XNC2_RS10035XNC2_RS10070XNC2_RS10085XNC2_RS21435XNC2_RS10090XNC2_RS10095XNC2_RS10100XNC2_RS10105XNC2_RS10120XNC2_RS10130XNC2_RS10135XNC2_RS10150XNC2_RS10155XNC2_RS10170XNC2_RS10175
Location: 2312901..2313941 (1041 bp)
Type: Transposase
Protein ID: WP_013141539.1
Location: 2316532..2317149 (618 bp)
Type: Others
Protein ID: WP_013184413.1
Location: 2317131..2317364 (234 bp)
Type: Others
Protein ID: WP_013184414.1
Location: 2317364..2319550 (2187 bp)
Type: Others
Protein ID: WP_013184415.1
Location: 2319608..2319907 (300 bp)
Type: Transposase
Protein ID: Protein_1984
Location: 2320543..2320821 (279 bp)
Type: Toxin
Protein ID: WP_113967504.1
Location: 2320818..2321174 (357 bp)
Type: Antitoxin
Protein ID: WP_013184418.1
Location: 2322887..2323633 (747 bp)
Type: Transposase
Protein ID: Protein_1989
Location: 2323635..2324684 (1050 bp)
Type: Transposase
Protein ID: Protein_1990
Location: 2324769..2325791 (1023 bp)
Type: Transposase
Protein ID: WP_010845954.1
Location: 2325942..2326265 (324 bp)
Type: Transposase
Protein ID: WP_013184424.1
Location: 2326297..2326773 (477 bp)
Type: Transposase
Protein ID: WP_197541258.1
Location: 2326990..2329376 (2387 bp)
Type: Transposase
Protein ID: Protein_1994
Location: 2330492..2332435 (1944 bp)
Type: Others
Protein ID: WP_013184428.1
Location: 2332573..2333468 (896 bp)
Type: Others
Protein ID: Protein_1997
Location: 2337678..2338274 (597 bp)
Type: Others
Protein ID: WP_013184434.1
Location: 2341383..2342204 (822 bp)
Type: Others
Protein ID: WP_010845970.1
Location: 2346683..2347447 (765 bp)
Type: Others
Protein ID: Protein_2009
Location: 2350136..2350900 (765 bp)
Type: Others
Protein ID: WP_010845978.1
Location: 2350900..2351496 (597 bp)
Type: Others
Protein ID: WP_013184441.1
Location: 2307126..2307704 (579 bp)
Type: Others
Protein ID: WP_013141546.1
Location: 2307701..2309014 (1314 bp)
Type: Others
Protein ID: WP_041573865.1
Location: 2309014..2309931 (918 bp)
Type: Others
Protein ID: WP_013141544.1
Location: 2309915..2310208 (294 bp)
Type: Others
Protein ID: Protein_1971
Location: 2310274..2310417 (144 bp)
Type: Others
Protein ID: WP_021326607.1
Location: 2310598..2311260 (663 bp)
Type: Others
Protein ID: WP_013141542.1
Location: 2311260..2311637 (378 bp)
Type: Others
Protein ID: WP_013141541.1
Location: 2311647..2312093 (447 bp)
Type: Others
Protein ID: WP_013184411.1
Location: 2312102..2312506 (405 bp)
Type: Others
Protein ID: Protein_1976
Location: 2312492..2312788 (297 bp)
Type: Others
Protein ID: Protein_1977
Location: 2313975..2314505 (531 bp)
Type: Others
Protein ID: WP_013141538.1
Location: 2314502..2316365 (1864 bp)
Type: Others
Protein ID: Protein_1980
Location: 2321620..2322330 (711 bp)
Type: Others
Protein ID: WP_013184420.1
Location: 2322336..2322728 (393 bp)
Type: Others
Protein ID: Protein_1988
Location: 2329377..2329910 (534 bp)
Type: VF
Protein ID: WP_045107667.1
Location: 2333530..2334006 (477 bp)
Type: Transposase
Protein ID: WP_197541259.1
Location: 2334054..2334362 (309 bp)
Type: Others
Protein ID: WP_013184432.1
Location: 2334369..2334692 (324 bp)
Type: Others
Protein ID: WP_010845962.1
Location: 2334685..2335410 (726 bp)
Type: Others
Protein ID: WP_013184433.1
Location: 2335579..2336748 (1170 bp)
Type: Others
Protein ID: WP_010845965.1
Location: 2336755..2337069 (315 bp)
Type: Others
Protein ID: WP_010845966.1
Location: 2338380..2341046 (2667 bp)
Type: Others
Protein ID: WP_173363111.1
Location: 2342326..2343300 (975 bp)
Type: Others
Protein ID: WP_010845971.1
Location: 2343646..2346243 (2598 bp)
Type: Others
Protein ID: WP_013184437.1
Location: 2347606..2348646 (1041 bp)
Type: Transposase
Protein ID: WP_013184439.1
Location: 2348850..2349896 (1047 bp)
Type: Others
Protein ID: WP_010845977.1
Location: 2351555..2352478 (924 bp)
Type: Others
Protein ID: WP_010845980.1
Location: 2352541..2353161 (621 bp)
Type: Others
Protein ID: WP_013184442.1
ToxinAntibiotic ResistanceTransposaseIntegraseOthersAntitoxinVirulence FactorRelaxaseoriT
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
XNC2_RS09945 ()2307126..2307704-579WP_013141546.1type IV conjugative transfer system lipoprotein TraV-
XNC2_RS09950 ()2307701..2309014-1314WP_041573865.1conjugal transfer protein TraB-
XNC2_RS09955 ()2309014..2309931-918WP_013141544.1type-F conjugative transfer system secretin TraK-
XNC2_RS09960 ()2309915..2310208-294Protein_1971pilus assembly protein-
XNC2_RS23290 ()2310274..2310417-144WP_021326607.1hypothetical protein-
XNC2_RS09965 ()2310598..2311260-663WP_013141542.1hypothetical protein-
XNC2_RS09970 ()2311260..2311637-378WP_013141541.1hypothetical protein-
XNC2_RS09975 ()2311647..2312093-447WP_013184411.1hypothetical protein-
XNC2_RS22820 ()2312102..2312506-405Protein_1976DUF4400 domain-containing protein-
XNC2_RS23480 ()2312492..2312788-297Protein_1977type IV secretion system DNA-binding domain-containing protein-
XNC2_RS09985 ()2312901..2313941+1041WP_013141539.1IS481 family transposase ISVvu4Transposase
XNC2_RS09990 ()2313975..2314505-531WP_013141538.1hypothetical protein-
XNC2_RS09995 ()2314502..2316365-1864Protein_1980TraI domain-containing protein-
XNC2_RS10000 ()2316532..2317149+618WP_013184413.1hypothetical protein-
XNC2_RS10005 ()2317131..2317364+234WP_013184414.1hypothetical protein-
XNC2_RS10010 ()2317364..2319550+2187WP_013184415.1DNA topoisomerase 3-
XNC2_RS10015 ()2319608..2319907+300Protein_1984IS630 family transposase ISSsu3Transposase
XNC2_RS10020 ()2320543..2320821+279WP_113967504.1type II toxin-antitoxin system HicA family toxinToxin Detail
XNC2_RS10025 ()2320818..2321174+357WP_013184418.1type II toxin-antitoxin system HicB family antitoxinAntitoxin Detail
XNC2_RS10030 ()2321620..2322330-711WP_013184420.1portal protein-
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Similar MGE(s)

Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

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Detail
Organism
MGE type
Related TA
Genome accession
Coordinates
Mash
distance
Xenorhabdus nematophila ATCC 19061Integrative and Conjugative ElementTA24799NC_0142282312367..23489510