MGE detailed information
MGE type: Genomic_island MGE length: 80556 bp
Accession: NZ_CP128548 Location: 3466665..3547220 Organism: Pseudomonas kurunegalensis strain NMI3456_12 Replicon: chromosome
Accession: NZ_CP128548 Location: 3466665..3547220 Organism: Pseudomonas kurunegalensis strain NMI3456_12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LU664_RS16235 (LU664_016235) | 3461805..3462812 | + | 1008 | WP_060497287.1 | cytochrome d ubiquinol oxidase subunit II | - |
| LU664_RS16240 (LU664_016240) | 3462825..3462965 | + | 141 | WP_082426321.1 | DUF2474 domain-containing protein | - |
| LU664_RS16245 (LU664_016245) | 3463067..3463474 | + | 408 | WP_060497288.1 | DUF2946 family protein | - |
| LU664_RS16250 (LU664_016250) | 3463550..3465601 | + | 2052 | WP_232914692.1 | TonB-dependent receptor | - |
| LU664_RS16255 (LU664_016255) | 3465672..3465779 | - | 108 | Protein_3178 | copper resistance protein CopD | - |
| LU664_RS16260 (LU664_016260) | 3465886..3466635 | + | 750 | Protein_3179 | DNA cytosine methyltransferase | - |
| LU664_RS16265 (LU664_016265) | 3466875..3467255 | + | 381 | WP_223624033.1 | hypothetical protein | - |
| LU664_RS16270 (LU664_016270) | 3467634..3467915 | - | 282 | WP_060497292.1 | hypothetical protein | - |
| LU664_RS16275 (LU664_016275) | 3468044..3468694 | + | 651 | WP_060497293.1 | hypothetical protein | - |
| LU664_RS16280 (LU664_016280) | 3468691..3468945 | + | 255 | WP_164524675.1 | hypothetical protein | - |
| LU664_RS16285 (LU664_016285) | 3468942..3469508 | + | 567 | WP_060497295.1 | hypothetical protein | - |
| LU664_RS16290 (LU664_016290) | 3469552..3469875 | + | 324 | WP_060497296.1 | helix-turn-helix transcriptional regulator | - |
| LU664_RS16295 (LU664_016295) | 3469931..3470257 | + | 327 | WP_060497297.1 | hypothetical protein | - |
| LU664_RS16300 (LU664_016300) | 3470320..3470496 | + | 177 | WP_164524676.1 | hypothetical protein | - |
| LU664_RS16305 (LU664_016305) | 3470516..3470920 | + | 405 | WP_232905530.1 | hypothetical protein | - |
| LU664_RS16310 (LU664_016310) | 3470806..3471969 | + | 1164 | Protein_3189 | tyrosine-type recombinase/integrase | - |
| LU664_RS16315 (LU664_016315) | 3472284..3473693 | + | 1410 | WP_164524677.1 | Prophage integrase IntA ; Integrase | Integrase |
| LU664_RS16320 (LU664_016320) | 3473687..3473980 | - | 294 | WP_164524678.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| LU664_RS16325 (LU664_016325) | 3473968..3474240 | - | 273 | WP_096862010.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| LU664_RS16330 (LU664_016330) | 3474675..3476402 | - | 1728 | WP_217989239.1 | GTPase domain-containing protein | - |
| LU664_RS16335 (LU664_016335) | 3476389..3478125 | - | 1737 | WP_164524681.1 | hypothetical protein | - |
| LU664_RS16340 (LU664_016340) | 3478126..3478731 | - | 606 | WP_164524682.1 | hypothetical protein | - |
| LU664_RS16345 (LU664_016345) | 3478769..3479260 | - | 492 | WP_164524683.1 | hypothetical protein | - |
| LU664_RS16350 (LU664_016350) | 3479987..3480232 | - | 246 | WP_206520096.1 | hypothetical protein | - |
| LU664_RS16355 (LU664_016355) | 3480422..3480754 | + | 333 | WP_036992178.1 | hypothetical protein | - |
| LU664_RS16360 (LU664_016360) | 3480814..3481782 | + | 969 | WP_164524684.1 | DUF932 domain-containing protein | - |
| LU664_RS16365 (LU664_016365) | 3481866..3482270 | - | 405 | WP_003291451.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| LU664_RS16370 (LU664_016370) | 3482270..3482500 | - | 231 | WP_003285520.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| LU664_RS16375 (LU664_016375) | 3482657..3483661 | + | 1005 | WP_003291452.1 | YqaJ viral recombinase family protein | - |
| LU664_RS16380 (LU664_016380) | 3483753..3484658 | + | 906 | WP_164524685.1 | hydrolase or metal-binding protein | - |
| LU664_RS16385 (LU664_016385) | 3484669..3485166 | + | 498 | WP_116801388.1 | DNA repair protein RadC | - |
| LU664_RS16390 (LU664_016390) | 3485177..3485347 | + | 171 | WP_164524686.1 | hypothetical protein | - |
| LU664_RS16395 (LU664_016395) | 3485443..3486516 | - | 1074 | WP_232905531.1 | BREX system Lon protease-like protein BrxL | - |
| LU664_RS16400 (LU664_016400) | 3486537..3487693 | + | 1157 | WP_164524687.1 | IS3 family transposase ISStma5 | Transposase |
| LU664_RS16405 (LU664_016405) | 3487594..3488769 | - | 1176 | WP_232905532.1 | BREX system Lon protease-like protein BrxL | - |
| LU664_RS16410 (LU664_016410) | 3488782..3489705 | - | 924 | WP_232905533.1 | BREX-1 system phosphatase PglZ type A | - |
| LU664_RS16415 (LU664_016415) | 3489909..3490064 | + | 156 | WP_232905538.1 | DUF4113 domain-containing protein | - |
| LU664_RS16420 (LU664_016420) | 3490289..3490942 | - | 654 | WP_023127664.1 | inovirus Gp2 family protein | - |
| LU664_RS16425 (LU664_016425) | 3491259..3491453 | - | 195 | WP_153329498.1 | AlpA family transcriptional regulator | - |
| LU664_RS16430 (LU664_016430) | 3491883..3492746 | + | 864 | WP_153329500.1 | hypothetical protein | - |
| LU664_RS16435 (LU664_016435) | 3493005..3493379 | - | 375 | WP_232905534.1 | Prophage integrase IntA ; Integrase | Integrase |
| LU664_RS16440 (LU664_016440) | 3493483..3493978 | + | 496 | Protein_3215 | DDE-type integrase/transposase/recombinase | - |
| LU664_RS16445 (LU664_016445) | 3493985..3494200 | - | 216 | Protein_3216 | IS3 family transposase ISXcd1 | Transposase |
| LU664_RS16450 (LU664_016450) | 3494521..3495666 | - | 1146 | WP_289668253.1 | Outer membrane protein OprJ | VF |
| LU664_RS16455 (LU664_016455) | 3495643..3496407 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LU664_RS16460 (LU664_016460) | 3496547..3496612 | - | 66 | Protein_3219 | hypothetical protein | - |
| LU664_RS16465 (LU664_016465) | 3496811..3497614 | + | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| LU664_RS16470 (LU664_016470) | 3497614..3498450 | + | 837 | WP_000480968.1 | hypothetical protein | ARG |
| LU664_RS16475 (LU664_016475) | 3498492..3499721 | - | 1230 | WP_232905536.1 | hypothetical protein | - |
| LU664_RS16480 (LU664_016480) | 3500161..3500718 | - | 558 | WP_125853905.1 | TetR/AcrR family transcriptional regulator | - |
| LU664_RS16485 (LU664_016485) | 3500898..3502061 | + | 1164 | WP_037009368.1 | Multidrug efflux pump subunit AcrA | VF |
| LU664_RS16490 (LU664_016490) | 3502077..3505211 | + | 3135 | WP_164524688.1 | Multidrug resistance protein MexB | VF |
| LU664_RS16495 (LU664_016495) | 3505216..3505596 | + | 381 | Protein_3226 | hypothetical protein | VF |
| LU664_RS16500 (LU664_016500) | 3505651..3506415 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| LU664_RS16505 (LU664_016505) | 3506647..3507270 | + | 624 | WP_003155741.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| LU664_RS16510 (LU664_016510) | 3507451..3508251 | - | 801 | WP_003108247.1 | Metallo-beta-lactamase type 2 | ARG |
| LU664_RS16515 (LU664_016515) | 3508342..3508896 | - | 555 | WP_071984682.1 | AAC(6')-Ib family aminoglycoside 6'-N-acetyltransferase | - |
| LU664_RS16520 (LU664_016520) | 3509025..3509261 | - | 237 | WP_063844476.1 | trimethoprim-resistant dihydrofolate reductase DfrB1 | - |
| LU664_RS16525 (LU664_016525) | 3509468..3510481 | + | 1014 | WP_000845054.1 | IS91 family transposase ISAzo26 | Transposase |
| LU664_RS16530 (LU664_016530) | 3510780..3511697 | + | 918 | WP_017335988.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| LU664_RS16535 (LU664_016535) | 3511789..3511974 | + | 186 | WP_224372750.1 | hypothetical protein | - |
| LU664_RS16540 (LU664_016540) | 3512025..3513860 | - | 1836 | WP_039175666.1 | Putative multidrug export ATP-binding/permease protein | VF |
| LU664_RS16545 (LU664_016545) | 3513924..3514256 | - | 333 | Protein_3236 | Ferric enterobactin transport ATP-binding protein FepC | VF |
| LU664_RS16550 (LU664_016550) | 3514493..3516034 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| LU664_RS16555 (LU664_016555) | 3516439..3517290 | - | 852 | WP_000946487.1 | Dihydropteroate synthase | ARG |
| LU664_RS16560 (LU664_016560) | 3517392..3517691 | + | 300 | Protein_3239 | 60 kDa chaperonin | VF |
| LU664_RS16565 (LU664_016565) | 3517695..3518045 | + | 351 | Protein_3240 | 60 kDa chaperonin | VF |
| LU664_RS16570 (LU664_016570) | 3518320..3519804 | + | 1485 | WP_022742855.1 | IS91 family transposase ISVsa3 | Transposase |
| LU664_RS16575 (LU664_016575) | 3519896..3520618 | - | 723 | WP_223151157.1 | LysR family transcriptional regulator | - |
| LU664_RS16580 (LU664_016580) | 3520708..3521883 | - | 1176 | WP_001257840.1 | Tetracycline resistance protein, class C | ARG |
| LU664_RS16585 (LU664_016585) | 3521987..3522613 | + | 627 | WP_000163574.1 | tetracycline resistance transcriptional repressor TetR(G) | - |
| LU664_RS16590 (LU664_016590) | 3522610..3522726 | - | 117 | Protein_3245 | DUF3363 domain-containing protein | - |
| LU664_RS16595 (LU664_016595) | 3522820..3524034 | - | 1215 | WP_000214125.1 | Multidrug resistance protein MdtL | ARG |
| LU664_RS16600 (LU664_016600) | 3524251..3524706 | - | 456 | Protein_3247 | DUF3363 domain-containing protein | - |
| LU664_RS16605 (LU664_016605) | 3524753..3525307 | - | 555 | WP_023622803.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LU664_RS16610 (LU664_016610) | 3525469..3526482 | + | 1014 | WP_000845054.1 | IS91 family transposase ISAzo26 | Transposase |
| LU664_RS16615 (LU664_016615) | 3526657..3526791 | - | 135 | WP_269812272.1 | hypothetical protein | - |
| LU664_RS16620 (LU664_016620) | 3526785..3527132 | - | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| LU664_RS16625 (LU664_016625) | 3527324..3528583 | - | 1260 | WP_001256776.1 | chloramphenicol efflux MFS transporter CmlA1 | ARG |
| LU664_RS16630 (LU664_016630) | 3528838..3529392 | - | 555 | WP_023622803.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| LU664_RS16635 (LU664_016635) | 3529510..3529983 | - | 474 | WP_001830196.1 | trimethoprim-resistant dihydrofolate reductase DfrA15 | - |
| LU664_RS16640 (LU664_016640) | 3530140..3531153 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| LU664_RS16645 (LU664_016645) | 3531667..3531873 | - | 207 | WP_164524690.1 | hypothetical protein | - |
| LU664_RS16650 (LU664_016650) | 3531870..3532163 | - | 294 | WP_028698395.1 | hypothetical protein | - |
| LU664_RS16655 (LU664_016655) | 3532237..3532461 | - | 225 | WP_164524691.1 | hypothetical protein | - |
| LU664_RS16660 (LU664_016660) | 3532632..3532973 | + | 342 | WP_164524692.1 | hypothetical protein | - |
| LU664_RS16665 (LU664_016665) | 3532983..3533243 | - | 261 | WP_164524693.1 | hypothetical protein | - |
| LU664_RS16670 (LU664_016670) | 3533240..3533623 | - | 384 | WP_164524694.1 | hypothetical protein | - |
| LU664_RS16675 (LU664_016675) | 3533620..3534066 | - | 447 | WP_164524695.1 | structural protein P5 | - |
| LU664_RS16680 (LU664_016680) | 3534125..3535573 | - | 1449 | WP_164524696.1 | hypothetical protein | - |
| LU664_RS16685 (LU664_016685) | 3535651..3536115 | - | 465 | WP_164524697.1 | DUF1566 domain-containing protein | - |
| LU664_RS16690 (LU664_016690) | 3536166..3538211 | - | 2046 | WP_164524698.1 | hypothetical protein | - |
| LU664_RS16695 (LU664_016695) | 3538268..3541321 | - | 3054 | WP_164524699.1 | host specificity factor TipJ family phage tail protein | - |
| LU664_RS16700 (LU664_016700) | 3541318..3541695 | - | 378 | WP_164524700.1 | hypothetical protein | - |
| LU664_RS16705 (LU664_016705) | 3541698..3542183 | - | 486 | WP_164524701.1 | DUF1833 family protein | - |
| LU664_RS16710 (LU664_016710) | 3542180..3542632 | - | 453 | WP_164524702.1 | transposase | - |
| LU664_RS16715 (LU664_016715) | 3542645..3546268 | - | 3624 | WP_164524703.1 | phage tail length tape measure family protein | - |
| LU664_RS16720 (LU664_016720) | 3546326..3546640 | - | 315 | WP_164524704.1 | superinfection immunity protein | - |
| LU664_RS16725 (LU664_016725) | 3546697..3547005 | - | 309 | WP_164524705.1 | hypothetical protein | - |
| LU664_RS16730 (LU664_016730) | 3547062..3547220 | - | 159 | WP_164524706.1 | hypothetical protein | - |
| LU664_RS16735 (LU664_016735) | 3547233..3547442 | - | 210 | WP_164524707.1 | hypothetical protein | - |
| LU664_RS16740 (LU664_016740) | 3547490..3547963 | - | 474 | WP_164524708.1 | hypothetical protein | - |
| LU664_RS16745 (LU664_016745) | 3548040..3549203 | - | 1164 | WP_164524709.1 | phage tail tube protein | - |
| LU664_RS16750 (LU664_016750) | 3549269..3549790 | - | 522 | WP_164524710.1 | KilA-N domain-containing protein | - |
| LU664_RS16755 (LU664_016755) | 3549912..3550325 | - | 414 | WP_164524711.1 | phage tail terminator-like protein | - |
| LU664_RS16760 (LU664_016760) | 3550322..3550741 | - | 420 | WP_164524712.1 | HK97 gp10 family phage protein | - |
| LU664_RS16765 (LU664_016765) | 3550741..3551127 | - | 387 | WP_164524713.1 | glutamate 5-kinase | - |
| LU664_RS16770 (LU664_016770) | 3551129..3551500 | - | 372 | WP_164524714.1 | hypothetical protein | - |
| LU664_RS16775 (LU664_016775) | 3551500..3551796 | - | 297 | WP_164524715.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|