MGE detailed information
MGE type: Genomic_island MGE length: 10392 bp
Accession: NZ_CP128261 Location: 1003649..1014040 Organism: Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B Replicon: chromosome
Accession: NZ_CP128261 Location: 1003649..1014040 Organism: Salmonella enterica subsp. enterica serovar Heidelberg isolate FT3-7B Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QR684_RS04795 (999072) | 999072..1001639 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| QR684_RS04800 (1001798) | 1001798..1002319 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| QR684_RS04805 (1002491) | 1002491..1003147 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| QR684_RS04810 (1003380) | 1003380..1003789 | + | 410 | Protein_943 | IS5/IS1182 family transposase | - |
| QR684_RS04815 (1003862) | 1003862..1004389 | - | 528 | WP_000971648.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QR684_RS04820 (1004386) | 1004386..1004676 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QR684_RS04825 (1004946) | 1004946..1005124 | - | 179 | Protein_946 | IS3 family transposase | - |
| QR684_RS04830 (1005365) | 1005365..1005691 | + | 327 | WP_000393301.1 | hypothetical protein | - |
| QR684_RS04835 (1005964) | 1005964..1006311 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| QR684_RS04840 (1006296) | 1006296..1006745 | - | 450 | WP_000381611.1 | hypothetical protein | - |
| QR684_RS04845 (1007177) | 1007177..1007620 | - | 444 | WP_000715096.1 | Type 3 secretion system pilotin | VF |
| QR684_RS04850 (1008077) | 1008077..1008727 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| QR684_RS04855 (1008724) | 1008724..1010412 | + | 1689 | WP_000848099.1 | Type 3 secretion system secretin | VF |
| QR684_RS04860 (1010409) | 1010409..1011527 | + | 1119 | WP_000612171.1 | Protein MxiC | VF |
| QR684_RS04865 (1011552) | 1011552..1013609 | + | 2058 | WP_000927220.1 | Invasion protein InvA | VF |
| QR684_RS04870 (1013633) | 1013633..1014040 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| QR684_RS04875 (1014037) | 1014037..1015332 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| QR684_RS04880 (1015310) | 1015310..1015753 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| QR684_RS04885 (1015753) | 1015753..1016763 | + | 1011 | WP_000503085.1 | SPI-1 type III secretion system protein SpaN | - |
| QR684_RS04890 (1016763) | 1016763..1017674 | + | 912 | WP_000058739.1 | SPI-1 type III secretion system protein SpaO | - |
| QR684_RS04895 (1017664) | 1017664..1018338 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| QR684_RS04900 (1018364) | 1018364..1018624 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.008 |