MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 129237 bp
Accession: NZ_CP127882 Location: 1..129237 Organism: Serratia marcescens strain ELP1.10 Replicon: plasmid pELP1.10
Accession: NZ_CP127882 Location: 1..129237 Organism: Serratia marcescens strain ELP1.10 Replicon: plasmid pELP1.10
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRD25_RS23910 (QRD25_23915) | 1..984 | + | 984 | WP_286094271.1 | replication initiation protein | - |
| QRD25_RS23915 (QRD25_23920) | 1059..1409 | - | 351 | WP_286094272.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QRD25_RS23920 (QRD25_23925) | 1409..1636 | - | 228 | WP_286094273.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QRD25_RS23925 (QRD25_23930) | 2058..2309 | - | 252 | WP_286094274.1 | hypothetical protein | - |
| QRD25_RS23930 (QRD25_23935) | 2407..3069 | - | 663 | WP_286094313.1 | tyrosine-type recombinase/integrase | - |
| QRD25_RS23935 (QRD25_23940) | 5116..6441 | - | 1326 | WP_286094275.1 | MATE family efflux transporter | - |
| QRD25_RS23940 (QRD25_23945) | 6438..7211 | - | 774 | WP_286094276.1 | HAD family hydrolase | - |
| QRD25_RS23945 (QRD25_23950) | 7215..7835 | - | 621 | WP_286094277.1 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase | VF |
| QRD25_RS23950 (QRD25_23955) | 7822..8712 | - | 891 | WP_286094278.1 | glycosyltransferase | - |
| QRD25_RS23955 (QRD25_23960) | 9361..9765 | - | 405 | WP_286094279.1 | helix-turn-helix domain-containing protein | - |
| QRD25_RS23960 (QRD25_23965) | 11018..15649 | + | 4632 | WP_286094280.1 | hypothetical protein | VF |
| QRD25_RS23965 (QRD25_23970) | 16977..17690 | + | 714 | Protein_11 | IS5 family transposase | - |
| QRD25_RS23970 (QRD25_23975) | 19420..19869 | + | 450 | WP_004966142.1 | phage tail protein | - |
| QRD25_RS23975 (QRD25_23980) | 19918..21012 | + | 1095 | WP_286094281.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QRD25_RS23980 (QRD25_23985) | 21072..22643 | + | 1572 | WP_286094282.1 | phage tail sheath C-terminal domain-containing protein | - |
| QRD25_RS23985 (QRD25_23990) | 22762..23970 | + | 1209 | WP_286094283.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QRD25_RS23990 (QRD25_23995) | 23967..24425 | + | 459 | WP_286094284.1 | phage tail protein | - |
| QRD25_RS23995 (QRD25_24000) | 24431..24604 | + | 174 | WP_286094285.1 | DUF5908 family protein | - |
| QRD25_RS24000 (QRD25_24005) | 24640..25269 | + | 630 | WP_286094314.1 | hypothetical protein | - |
| QRD25_RS24005 (QRD25_24010) | 25313..27415 | + | 2103 | WP_286094286.1 | contractile injection system protein, VgrG/Pvc8 family | - |
| QRD25_RS24010 (QRD25_24015) | 27449..27916 | + | 468 | WP_286094287.1 | GPW/gp25 family protein | - |
| QRD25_RS24015 (QRD25_24020) | 27901..28329 | + | 429 | WP_286094288.1 | hypothetical protein | - |
| QRD25_RS24020 (QRD25_24025) | 28351..31932 | + | 3582 | WP_286094289.1 | hypothetical protein | - |
| QRD25_RS24025 (QRD25_24030) | 32041..35142 | + | 3102 | WP_286094290.1 | hypothetical protein | - |
| QRD25_RS24030 (QRD25_24035) | 35270..37027 | + | 1758 | WP_286094291.1 | contractile injection system tape measure protein | - |
| QRD25_RS24035 (QRD25_24040) | 37024..39210 | + | 2187 | WP_286094292.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| QRD25_RS24040 (QRD25_24045) | 39323..40192 | + | 870 | WP_286094293.1 | Pvc16 family protein | - |
| QRD25_RS24045 (QRD25_24050) | 40283..41431 | + | 1149 | WP_286094294.1 | hypothetical protein | - |
| QRD25_RS24050 (QRD25_24055) | 41745..43466 | + | 1722 | WP_286094295.1 | hypothetical protein | VF |
| QRD25_RS24055 (QRD25_24060) | 43653..43901 | + | 249 | WP_286094296.1 | hypothetical protein | - |
| QRD25_RS24060 (QRD25_24065) | 43911..44603 | + | 693 | WP_286094297.1 | hypothetical protein | - |
| QRD25_RS24065 (QRD25_24075) | 45040..45429 | + | 390 | WP_286094298.1 | hypothetical protein | - |
| QRD25_RS24070 (QRD25_24080) | 45983..46867 | + | 885 | WP_286094299.1 | hypothetical protein | - |
| QRD25_RS24075 (QRD25_24085) | 47256..48365 | - | 1110 | WP_286094300.1 | IS3 family transposase IS1400 | Transposase |
| QRD25_RS24080 (QRD25_24090) | 48695..48916 | - | 222 | WP_286094301.1 | hypothetical protein | - |
| QRD25_RS24085 (QRD25_24095) | 49101..51821 | - | 2721 | WP_286094302.1 | response regulator | - |
| QRD25_RS24090 (QRD25_24100) | 51824..52432 | - | 609 | WP_286094303.1 | Transcriptional regulatory protein RcsB | VF |
| QRD25_RS24095 (QRD25_24105) | 54062..54688 | + | 627 | WP_286094304.1 | hypothetical protein | VF |
| QRD25_RS24100 (QRD25_24110) | 55652..57007 | + | 1356 | WP_286094315.1 | 8-oxoguanine deaminase | - |
| QRD25_RS24105 (QRD25_24115) | 57481..57599 | + | 119 | Protein_39 | helix-turn-helix domain-containing protein | - |
| QRD25_RS24110 (QRD25_24120) | 57684..57752 | - | 69 | Protein_40 | recombinase family protein | - |
| QRD25_RS24115 (QRD25_24125) | 58124..58861 | - | 738 | WP_286094305.1 | hypothetical protein | - |
| QRD25_RS24120 (QRD25_24130) | 58865..60130 | - | 1266 | WP_286094306.1 | hypothetical protein | - |
| QRD25_RS24125 (QRD25_24135) | 60138..60458 | + | 321 | WP_286094307.1 | putative mucin/carbohydrate-binding domain-containing protein | - |
| QRD25_RS24130 (QRD25_24140) | 60809..61513 | + | 705 | WP_286094308.1 | hypothetical protein | - |
| QRD25_RS24135 (QRD25_24145) | 61568..61852 | - | 285 | WP_286094309.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QRD25_RS24140 (QRD25_24150) | 61845..62087 | - | 243 | WP_286094310.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| QRD25_RS24145 (QRD25_24155) | 63046..63993 | - | 948 | WP_286094311.1 | Replication protein | - |
| QRD25_RS24150 (QRD25_24160) | 64425..64676 | - | 252 | WP_286094312.1 | replication regulatory protein RepA | - |
| QRD25_RS24155 (QRD25_24165) | 64833..65609 | - | 777 | WP_286094220.1 | TraX family protein | - |
| QRD25_RS24160 (QRD25_24170) | 65629..66087 | - | 459 | WP_286094316.1 | Phospholipase D | VF |
| QRD25_RS24165 (QRD25_24175) | 66176..66394 | - | 219 | WP_286094221.1 | hypothetical protein | - |
| QRD25_RS24170 (QRD25_24180) | 66473..71779 | - | 5307 | WP_286094222.1 | Multifunctional conjugation protein TraI | Relaxase |
| QRD25_RS24175 (QRD25_24185) | 71897..72124 | + | 228 | WP_286094223.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| QRD25_RS24180 (QRD25_24190) | 72124..72522 | + | 399 | WP_286094224.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| QRD25_RS24185 (QRD25_24195) | 72558..74753 | - | 2196 | WP_286094225.1 | type IV conjugative transfer system coupling protein TraD | - |
| QRD25_RS24190 (QRD25_24200) | 74743..74952 | - | 210 | WP_033641525.1 | hypothetical protein | - |
| QRD25_RS24195 (QRD25_24205) | 74955..75488 | - | 534 | WP_286094226.1 | hypothetical protein | - |
| QRD25_RS24200 (QRD25_24210) | 75485..78316 | - | 2832 | WP_286094227.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QRD25_RS24205 (QRD25_24215) | 78318..79685 | - | 1368 | WP_286094228.1 | conjugal transfer pilus assembly protein TraH | - |
| QRD25_RS24210 (QRD25_24220) | 79682..80218 | - | 537 | WP_286094229.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QRD25_RS24215 (QRD25_24225) | 80205..80519 | - | 315 | WP_286094230.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QRD25_RS24220 (QRD25_24230) | 80531..81325 | - | 795 | WP_286094231.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QRD25_RS24225 (QRD25_24235) | 81322..83226 | - | 1905 | WP_286094232.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QRD25_RS24230 (QRD25_24240) | 83223..83897 | - | 675 | WP_286094233.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QRD25_RS24235 (QRD25_24245) | 83908..84906 | - | 999 | WP_286094234.1 | conjugal transfer pilus assembly protein TraU | - |
| QRD25_RS24240 (QRD25_24250) | 84903..85271 | - | 369 | WP_286094235.1 | hypothetical protein | - |
| QRD25_RS24245 (QRD25_24255) | 85283..85918 | - | 636 | WP_286094236.1 | type-F conjugative transfer system protein TraW | - |
| QRD25_RS24250 (QRD25_24260) | 85918..86856 | - | 939 | WP_286094237.1 | DsbA family protein | - |
| QRD25_RS24255 (QRD25_24265) | 86853..87272 | - | 420 | WP_286094238.1 | type-F conjugative transfer system protein TrbI | - |
| QRD25_RS24260 (QRD25_24270) | 87269..89899 | - | 2631 | WP_286094239.1 | type IV secretion system protein TraC | - |
| QRD25_RS24265 (QRD25_24275) | 89913..90452 | - | 540 | WP_286094317.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QRD25_RS24270 (QRD25_24280) | 90477..90863 | - | 387 | WP_060560513.1 | hypothetical protein | - |
| QRD25_RS24275 (QRD25_24285) | 90860..91078 | - | 219 | WP_286094240.1 | hypothetical protein | - |
| QRD25_RS24280 (QRD25_24290) | 91083..92480 | - | 1398 | WP_286094241.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QRD25_RS24285 (QRD25_24295) | 92480..93208 | - | 729 | WP_286094242.1 | type-F conjugative transfer system secretin TraK | - |
| QRD25_RS24290 (QRD25_24300) | 93198..93761 | - | 564 | WP_286094243.1 | type IV conjugative transfer system protein TraE | - |
| QRD25_RS24295 (QRD25_24305) | 93772..94077 | - | 306 | WP_286094244.1 | type IV conjugative transfer system protein TraL | - |
| QRD25_RS24300 (QRD25_24310) | 94089..94451 | - | 363 | WP_172691690.1 | type IV conjugative transfer system pilin TraA | - |
| QRD25_RS24305 (QRD25_24315) | 94565..94762 | - | 198 | WP_094141473.1 | TraY domain-containing protein | - |
| QRD25_RS24310 (QRD25_24320) | 94939..95523 | + | 585 | WP_286094245.1 | helix-turn-helix transcriptional regulator | - |
| QRD25_RS24315 (QRD25_24325) | 95514..96350 | + | 837 | WP_286094246.1 | queuosine precursor transporter | - |
| QRD25_RS24320 (QRD25_24330) | 96404..96655 | + | 252 | Protein_82 | hypothetical protein | VF |
| QRD25_RS24325 (QRD25_24335) | 97327..98154 | - | 828 | WP_286094247.1 | DUF932 domain-containing protein | - |
| QRD25_RS24330 (QRD25_24340) | 98211..98582 | - | 372 | WP_286094248.1 | dehydrogenase | - |
| QRD25_RS24335 (QRD25_24345) | 99144..99458 | - | 315 | WP_286094249.1 | hypothetical protein | - |
| QRD25_RS24340 (QRD25_24350) | 100082..100482 | - | 401 | Protein_86 | IS256 family transposase ISEae1 | Transposase |
| QRD25_RS24345 (QRD25_24355) | 100571..100774 | + | 204 | Protein_87 | hypothetical protein | - |
| QRD25_RS24350 (QRD25_24360) | 100910..101056 | + | 147 | Protein_88 | DNA polymerase V subunit UmuC | - |
| QRD25_RS24355 (QRD25_24365) | 101647..102426 | + | 780 | WP_286094250.1 | hypothetical protein | - |
| QRD25_RS24360 (QRD25_24370) | 102700..103032 | - | 333 | WP_286094251.1 | hypothetical protein | - |
| QRD25_RS24365 (QRD25_24375) | 103123..103527 | - | 405 | WP_286094252.1 | hypothetical protein | - |
| QRD25_RS24370 (QRD25_24380) | 104618..104905 | - | 288 | WP_164058116.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QRD25_RS24375 (QRD25_24385) | 104902..105153 | - | 252 | WP_164058115.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QRD25_RS24380 (QRD25_24390) | 105268..105945 | - | 678 | Protein_94 | plasmid SOS inhibition protein A | - |
| QRD25_RS24385 (QRD25_24395) | 105990..106430 | - | 441 | WP_286094253.1 | conjugation system SOS inhibitor PsiB | - |
| QRD25_RS24390 (QRD25_24400) | 106473..108524 | - | 2052 | WP_286094254.1 | ParB N-terminal domain-containing protein | - |
| QRD25_RS24395 (QRD25_24405) | 108618..108908 | - | 291 | WP_197761722.1 | ribulokinase | - |
| QRD25_RS24400 (QRD25_24410) | 109450..110085 | + | 636 | WP_019454356.1 | AAA family ATPase | - |
| QRD25_RS24405 (QRD25_24415) | 110079..110336 | + | 258 | WP_273974563.1 | hypothetical protein | - |
| QRD25_RS24410 (QRD25_24420) | 110632..111270 | + | 639 | WP_286094255.1 | hypothetical protein | - |
| QRD25_RS24415 (QRD25_24425) | 111509..112153 | - | 645 | WP_286094256.1 | tyrosine-type recombinase/integrase | - |
| QRD25_RS24420 (QRD25_24430) | 112978..113466 | + | 489 | WP_286094257.1 | hypothetical protein | - |
| QRD25_RS24425 (QRD25_24435) | 113738..113866 | + | 129 | Protein_103 | DinI-like family protein | - |
| QRD25_RS24430 (QRD25_24440) | 114016..115074 | + | 1059 | WP_286094258.1 | hypothetical protein | VF |
| QRD25_RS24435 (QRD25_24445) | 115799..116578 | - | 780 | WP_286094259.1 | DUF3472 domain-containing protein | - |
| QRD25_RS24440 (QRD25_24450) | 117040..117324 | + | 285 | WP_286094260.1 | hypothetical protein | - |
| QRD25_RS24445 (QRD25_24455) | 117335..117955 | - | 621 | WP_286094261.1 | tail fiber assembly protein | - |
| QRD25_RS24450 (QRD25_24460) | 117981..118415 | + | 435 | WP_286094262.1 | hypothetical protein | - |
| QRD25_RS24455 (QRD25_24465) | 118412..118621 | + | 210 | WP_286094263.1 | hypothetical protein | - |
| QRD25_RS24460 (QRD25_24470) | 118756..119106 | + | 351 | WP_286094264.1 | IS91 family transposase ISVa3 | Transposase |
| QRD25_RS24465 (QRD25_24475) | 119110..119286 | + | 177 | WP_286094265.1 | transposase | - |
| QRD25_RS24470 (QRD25_24480) | 119523..119726 | - | 204 | WP_286094266.1 | hypothetical protein | - |
| QRD25_RS24475 (QRD25_24485) | 119982..120941 | - | 960 | WP_286094267.1 | ADP-ribosyltransferase domain-containing protein | - |
| QRD25_RS24480 (QRD25_24490) | 121091..122226 | + | 1136 | WP_286094268.1 | IS3 family transposase ISEc14 | Transposase |
| QRD25_RS24485 (QRD25_24495) | 122267..122960 | + | 694 | Protein_115 | ISNCY family transposase ISRor2 | VF |
| QRD25_RS24490 (QRD25_24500) | 123086..123422 | - | 337 | Protein_116 | IS91 family transposase ISSod25 | Transposase |
| QRD25_RS24495 (QRD25_24505) | 123502..123732 | - | 231 | Protein_117 | hypothetical protein | - |
| QRD25_RS24500 (QRD25_24510) | 123766..124116 | - | 351 | WP_286094269.1 | hypothetical protein | - |
| QRD25_RS24505 (QRD25_24515) | 124553..124762 | + | 210 | WP_286094318.1 | transposase | - |
| QRD25_RS24510 (QRD25_24520) | 124823..125453 | + | 631 | Protein_120 | IS91 family transposase ISVa3 | Transposase |
| QRD25_RS24515 (QRD25_24525) | 125880..126848 | - | 969 | WP_286094270.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QRD25_RS24520 (QRD25_24530) | 126848..128014 | - | 1167 | WP_286094319.1 | plasmid-partitioning protein SopA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|