MGE detailed information
MGE type: Conjugative plasmid MGE length: 72585 bp
Accession: NZ_CP127317 Location: 1..72585 Organism: Escherichia coli strain Ch1 Replicon: plasmid pCh102
Accession: NZ_CP127317 Location: 1..72585 Organism: Escherichia coli strain Ch1 Replicon: plasmid pCh102
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRM71_RS26200 (159) | 159..545 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| QRM71_RS26205 (542) | 542..3172 | - | 2631 | WP_000069764.1 | type IV secretion system protein TraC | - |
| QRM71_RS26210 (3298) | 3298..3660 | - | 363 | WP_000836675.1 | hypothetical protein | - |
| QRM71_RS26215 (3688) | 3688..3903 | - | 216 | WP_000556747.1 | hypothetical protein | - |
| QRM71_RS26220 (3983) | 3983..4456 | - | 474 | WP_053895102.1 | hypothetical protein | - |
| QRM71_RS26225 (4449) | 4449..4862 | - | 414 | WP_000549581.1 | hypothetical protein | - |
| QRM71_RS26230 (4855) | 4855..5076 | - | 222 | WP_001278695.1 | conjugal transfer protein TraR | - |
| QRM71_RS26235 (5211) | 5211..5726 | - | 516 | WP_000809874.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QRM71_RS26240 (5723) | 5723..6043 | - | 321 | WP_233328933.1 | conjugal transfer protein TrbD | - |
| QRM71_RS26245 (6030) | 6030..6620 | - | 591 | WP_000002784.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QRM71_RS26250 (6610) | 6610..8037 | - | 1428 | WP_000146657.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QRM71_RS26255 (8037) | 8037..8765 | - | 729 | WP_001230798.1 | type-F conjugative transfer system secretin TraK | - |
| QRM71_RS26260 (8752) | 8752..9318 | - | 567 | WP_000399792.1 | type IV conjugative transfer system protein TraE | - |
| QRM71_RS26265 (9340) | 9340..9651 | - | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| QRM71_RS26270 (9666) | 9666..10025 | - | 360 | WP_000340272.1 | type IV conjugative transfer system pilin TraA | - |
| QRM71_RS26275 (10059) | 10059..10286 | - | 228 | WP_285978930.1 | conjugal transfer relaxosome protein TraY | - |
| QRM71_RS26280 (10380) | 10380..11065 | - | 686 | Protein_17 | PAS domain-containing protein | - |
| QRM71_RS26285 (11256) | 11256..11639 | - | 384 | WP_000124981.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QRM71_RS26290 (11916) | 11916..12563 | + | 648 | WP_000614935.1 | hypothetical protein | VF |
| QRM71_RS26295 (12859) | 12859..13680 | - | 822 | WP_032172795.1 | DUF932 domain-containing protein | - |
| QRM71_RS26300 (13799) | 13799..14086 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| QRM71_RS26305 (14387) | 14387..14560 | + | 174 | Protein_22 | hypothetical protein | - |
| QRM71_RS26310 (15007) | 15007..15132 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QRM71_RS26315 (15074) | 15074..15223 | - | 150 | Protein_24 | plasmid maintenance protein Mok | - |
| - (15209) | 15209..15433 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (15209) | 15209..15433 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (15209) | 15209..15433 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| - (15209) | 15209..15433 | - | 225 | NuclAT_0 | - | Antitoxin Detail |
| QRM71_RS26320 (15245) | 15245..15433 | + | 189 | WP_001299721.1 | hypothetical protein | - |
| QRM71_RS26325 (15402) | 15402..16164 | - | 763 | Protein_26 | plasmid SOS inhibition protein A | - |
| QRM71_RS26330 (16161) | 16161..16595 | - | 435 | WP_097483708.1 | conjugation system SOS inhibitor PsiB | - |
| QRM71_RS26335 (16650) | 16650..18608 | - | 1959 | WP_208483701.1 | ParB/RepB/Spo0J family partition protein | - |
| QRM71_RS26340 (18667) | 18667..18900 | - | 234 | WP_000006004.1 | DUF905 domain-containing protein | - |
| QRM71_RS26345 (18956) | 18956..19483 | - | 528 | WP_072649737.1 | single-stranded DNA-binding protein | - |
| QRM71_RS26350 (19840) | 19840..20052 | + | 213 | WP_162137382.1 | hypothetical protein | - |
| QRM71_RS26355 (19956) | 19956..20240 | - | 285 | WP_072165043.1 | hypothetical protein | - |
| QRM71_RS26360 (20126) | 20126..20392 | - | 267 | WP_001697809.1 | hypothetical protein | - |
| QRM71_RS26365 (20392) | 20392..20955 | - | 564 | WP_001311069.1 | class I SAM-dependent methyltransferase | - |
| QRM71_RS26370 (21002) | 21002..22363 | - | 1362 | WP_021534896.1 | DUF3560 domain-containing protein | - |
| QRM71_RS26375 (22415) | 22415..22645 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QRM71_RS26380 (23163) | 23163..23317 | + | 155 | Protein_37 | hypothetical protein | - |
| QRM71_RS26385 (23683) | 23683..23874 | - | 192 | WP_102761082.1 | hypothetical protein | - |
| QRM71_RS26390 (23874) | 23874..24293 | - | 420 | WP_102761081.1 | DUF1380 family protein | - |
| QRM71_RS26395 (24340) | 24340..24765 | - | 426 | WP_102761080.1 | antirestriction protein | - |
| QRM71_RS26400 (25112) | 25112..25207 | - | 96 | Protein_41 | hypothetical protein | - |
| QRM71_RS26405 (25171) | 25171..26072 | - | 902 | Protein_42 | DUF1281 domain-containing protein | - |
| QRM71_RS26410 (26167) | 26167..26459 | - | 293 | Protein_43 | hypothetical protein | - |
| QRM71_RS26415 (26606) | 26606..27568 | + | 963 | WP_285965604.1 | plasmid segregation protein ParM | - |
| QRM71_RS26420 (27571) | 27571..27921 | + | 351 | WP_001365718.1 | plasmid partitioning/stability family protein | - |
| QRM71_RS26425 (28267) | 28267..29067 | - | 801 | WP_285978931.1 | DUF1868 domain-containing protein | - |
| QRM71_RS26430 (29492) | 29492..29683 | - | 192 | WP_047635351.1 | Rop family plasmid primer RNA-binding protein | - |
| QRM71_RS26435 (29715) | 29715..29780 | + | 66 | Protein_48 | plasmid mobilization relaxosome protein MobC | - |
| QRM71_RS26440 (30270) | 30270..32042 | - | 1773 | WP_053287898.1 | DUF262 domain-containing protein | - |
| QRM71_RS26445 (32327) | 32327..32728 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QRM71_RS26450 (32661) | 32661..32918 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QRM71_RS26455 (33011) | 33011..33664 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QRM71_RS26460 (34119) | 34119..34331 | + | 213 | WP_021534904.1 | microcin B17 family TOMM | - |
| QRM71_RS26465 (34391) | 34391..35245 | + | 855 | WP_001528600.1 | McbB family protein | - |
| QRM71_RS26470 (35247) | 35247..36065 | + | 819 | WP_001528601.1 | SagB/ThcOx family dehydrogenase | - |
| QRM71_RS26475 (36121) | 36121..37236 | + | 1116 | WP_285978932.1 | YcaO-like family protein | - |
| QRM71_RS26480 (37246) | 37246..37971 | + | 726 | WP_021534906.1 | microcin B17 immunity protein McbE | - |
| QRM71_RS26485 (37968) | 37968..38699 | + | 732 | WP_021534907.1 | ATP-binding cassette domain-containing protein | - |
| QRM71_RS26490 (38703) | 38703..39266 | + | 564 | WP_021534908.1 | pentapeptide repeat-containing protein | - |
| QRM71_RS26495 (39963) | 39963..40343 | + | 381 | WP_285978923.1 | transposase | - |
| QRM71_RS26500 (40340) | 40340..40687 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| QRM71_RS26505 (40737) | 40737..42275 | + | 1539 | WP_285978924.1 | IS66 family transposase ISEc8 | Transposase |
| QRM71_RS26510 (42368) | 42368..43231 | + | 864 | WP_285978925.1 | endonuclease/exonuclease/phosphatase family protein | - |
| QRM71_RS26515 (43491) | 43491..43589 | - | 99 | WP_225379473.1 | helix-turn-helix domain-containing protein | - |
| QRM71_RS26520 (43618) | 43618..43794 | - | 177 | Protein_65 | hypothetical protein | - |
| QRM71_RS26525 (43763) | 43763..44515 | + | 753 | Protein_66 | IS110-like element ISEc20 family transposase | - |
| QRM71_RS26530 (44571) | 44571..44858 | - | 288 | WP_000865085.1 | helix-turn-helix transcriptional regulator | - |
| QRM71_RS26535 (44858) | 44858..45169 | - | 312 | WP_021534912.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QRM71_RS26540 (46139) | 46139..46993 | - | 855 | Protein_69 | incFII family plasmid replication initiator RepA | - |
| QRM71_RS26545 (46986) | 46986..47060 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| QRM71_RS26550 (47294) | 47294..47554 | - | 261 | WP_021536205.1 | replication regulatory protein RepA | - |
| QRM71_RS26555 (47838) | 47838..47987 | - | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| - (48036) | 48036..48092 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (48036) | 48036..48092 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (48036) | 48036..48092 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| - (48036) | 48036..48092 | + | 57 | NuclAT_1 | - | Antitoxin Detail |
| QRM71_RS26560 (48259) | 48259..48708 | - | 450 | WP_098717018.1 | hypothetical protein | - |
| QRM71_RS26565 (48862) | 48862..49452 | - | 591 | WP_285978926.1 | DUF2726 domain-containing protein | - |
| QRM71_RS26570 (49490) | 49490..49699 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| QRM71_RS26575 (49745) | 49745..50205 | - | 461 | Protein_76 | thermonuclease family protein | - |
| QRM71_RS26580 (50450) | 50450..50662 | - | 213 | WP_032161968.1 | hypothetical protein | - |
| QRM71_RS26585 (50793) | 50793..51353 | - | 561 | WP_032172786.1 | fertility inhibition protein FinO | - |
| QRM71_RS26590 (51408) | 51408..52154 | - | 747 | WP_285978927.1 | conjugal transfer pilus acetylase TraX | - |
| QRM71_RS26595 (52174) | 52174..57444 | - | 5271 | Protein_80 | Multifunctional conjugation protein TraI | Relaxase |
| QRM71_RS26600 (57444) | 57444..59597 | - | 2154 | WP_285978928.1 | type IV conjugative transfer system coupling protein TraD | - |
| QRM71_RS26605 (59648) | 59648..60388 | - | 741 | WP_021514832.1 | hypothetical protein | - |
| QRM71_RS26610 (60591) | 60591..61322 | - | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| QRM71_RS26615 (61371) | 61371..61856 | - | 486 | WP_000605868.1 | hypothetical protein | - |
| QRM71_RS26620 (61872) | 61872..64694 | - | 2823 | WP_285978929.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QRM71_RS26625 (64691) | 64691..66064 | - | 1374 | WP_001137358.1 | conjugal transfer pilus assembly protein TraH | - |
| QRM71_RS26630 (66064) | 66064..66426 | - | 363 | WP_002430925.1 | P-type conjugative transfer protein TrbJ | - |
| QRM71_RS26635 (66356) | 66356..66901 | - | 546 | WP_000052618.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QRM71_RS26640 (66888) | 66888..67172 | - | 285 | WP_000624110.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QRM71_RS26645 (67291) | 67291..67638 | - | 348 | WP_001287677.1 | conjugal transfer protein TrbA | - |
| QRM71_RS26650 (67654) | 67654..68397 | - | 744 | WP_001030376.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QRM71_RS26655 (68390) | 68390..68647 | - | 258 | WP_123008597.1 | conjugal transfer protein TrbE | - |
| QRM71_RS26660 (68674) | 68674..70482 | - | 1809 | WP_001567342.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QRM71_RS26665 (70479) | 70479..71117 | - | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QRM71_RS26670 (71126) | 71126..72118 | - | 993 | WP_000830839.1 | conjugal transfer pilus assembly protein TraU | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|