MGE detailed information
MGE type: IScluster/Tn MGE length: 6364 bp
Accession: NZ_CP127276 Location: 3779809..3786172 Organism: Mycobacterium tuberculosis strain 5521 Replicon: chromosome
Accession: NZ_CP127276 Location: 3779809..3786172 Organism: Mycobacterium tuberculosis strain 5521 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QRF08_RS17825 (QRF08_17825) | 3774865..3775518 | + | 654 | WP_003417903.1 | HAD family phosphatase | - |
| QRF08_RS17830 (QRF08_17830) | 3775557..3777062 | - | 1506 | WP_003417905.1 | type B diterpene cyclase | - |
| QRF08_RS17835 (QRF08_17835) | 3777067..3777957 | - | 891 | WP_003417908.1 | diterpene synthase | - |
| QRF08_RS17840 (QRF08_17840) | 3777966..3779576 | - | 1611 | WP_003417910.1 | 1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein | - |
| QRF08_RS17845 (QRF08_17845) | 3779521..3779700 | - | 180 | WP_250575601.1 | 1-deoxy-D-xylulose-5-phosphate synthase N-terminal domain-containing protein | - |
| QRF08_RS17855 (QRF08_17855) | 3781157..3782146 | - | 990 | WP_003417912.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| QRF08_RS17860 (QRF08_17860) | 3782146..3783198 | - | 1053 | WP_003900678.1 | polyprenyl synthetase family protein | - |
| QRF08_RS17865 (QRF08_17865) | 3783952..3784344 | - | 393 | WP_003417916.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QRF08_RS17870 (QRF08_17870) | 3784344..3784619 | - | 276 | WP_003912214.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QRF08_RS17875 (QRF08_17875) | 3784801..3786172 | + | 1372 | Protein_3531 | ISNCY family transposase ISRjo3 | Transposase |
| QRF08_RS17880 (QRF08_17880) | 3786362..3788557 | + | 2196 | WP_070895318.1 | PE family protein | - |
| QRF08_RS17885 (QRF08_17885) | 3788628..3789500 | - | 873 | WP_003906098.1 | 3-hydroxyacyl-thioester dehydratase HtdY | - |
| QRF08_RS17890 (QRF08_17890) | 3789574..3790284 | + | 711 | WP_003417932.1 | histidine phosphatase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | IScluster/Tn | TA131 | NC_000962 | 3795100..3801463 | 0 |