MGE detailed information
MGE type: Prophage MGE length: 58716 bp
Accession: NZ_CP127024 Location: 1622280..1680995 Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-048_8421A Replicon: chromosome
Accession: NZ_CP127024 Location: 1622280..1680995 Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-048_8421A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQO08_RS07865 (QQO08_07865) | 1617652..1617900 | + | 249 | WP_001151997.1 | ferredoxin | - |
| QQO08_RS07870 (QQO08_07870) | 1618006..1618551 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| QQO08_RS07875 (QQO08_07875) | 1618830..1618949 | - | 120 | WP_001789947.1 | hypothetical protein | - |
| QQO08_RS07880 (QQO08_07880) | 1619148..1620062 | - | 915 | WP_285236765.1 | DUF1672 domain-containing protein | - |
| QQO08_RS07885 (QQO08_07885) | 1620077..1620283 | - | 207 | WP_001033757.1 | hypothetical protein | - |
| QQO08_RS07890 (QQO08_07890) | 1620276..1621214 | - | 939 | WP_000472936.1 | DUF1672 domain-containing protein | - |
| QQO08_RS07895 (QQO08_07895) | 1621272..1622189 | - | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| QQO08_RS07900 (QQO08_07900) | 1622280..1622495 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| QQO08_RS07905 (QQO08_07905) | 1623217..1624671 | - | 1455 | WP_285236766.1 | N-acetylmuramoyl-L-alanine amidase | - |
| QQO08_RS07910 (QQO08_07910) | 1624682..1624984 | - | 303 | WP_000339144.1 | phage holin | - |
| QQO08_RS07915 (QQO08_07915) | 1625120..1625419 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| QQO08_RS07920 (QQO08_07920) | 1625465..1625629 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| QQO08_RS07925 (QQO08_07925) | 1625622..1626011 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| QQO08_RS07930 (QQO08_07930) | 1626011..1627477 | - | 1467 | WP_000067131.1 | BppU family phage baseplate upper protein | - |
| QQO08_RS07935 (QQO08_07935) | 1627477..1629387 | - | 1911 | WP_285236865.1 | hypothetical protein | - |
| QQO08_RS07940 (QQO08_07940) | 1629403..1629693 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| QQO08_RS07945 (QQO08_07945) | 1629693..1631276 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| QQO08_RS07950 (QQO08_07950) | 1631285..1632109 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| QQO08_RS07955 (QQO08_07955) | 1632109..1638309 | - | 6201 | WP_285236767.1 | phage tail tape measure protein | - |
| QQO08_RS07960 (QQO08_07960) | 1638323..1638481 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| QQO08_RS07965 (QQO08_07965) | 1638523..1638873 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| QQO08_RS07970 (QQO08_07970) | 1638931..1639386 | - | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| QQO08_RS07975 (QQO08_07975) | 1639478..1640119 | - | 642 | WP_000807532.1 | phage tail protein | - |
| QQO08_RS07980 (QQO08_07980) | 1640154..1640549 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| QQO08_RS07985 (QQO08_07985) | 1640550..1640951 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| QQO08_RS07990 (QQO08_07990) | 1640948..1641280 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| QQO08_RS07995 (QQO08_07995) | 1641292..1641570 | - | 279 | WP_000050975.1 | head-tail connector protein | - |
| QQO08_RS08000 (QQO08_08000) | 1641639..1642802 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| QQO08_RS08005 (QQO08_08005) | 1642814..1643587 | - | 774 | WP_000061868.1 | Clp protease ClpP | - |
| QQO08_RS08010 (QQO08_08010) | 1643571..1644809 | - | 1239 | WP_001100670.1 | phage portal protein | - |
| QQO08_RS08015 (QQO08_08015) | 1644814..1646505 | - | 1692 | WP_000153555.1 | terminase large subunit | - |
| QQO08_RS08020 (QQO08_08020) | 1646495..1646800 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| QQO08_RS08025 (QQO08_08025) | 1646929..1647243 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| QQO08_RS08030 (QQO08_08030) | 1647400..1647837 | - | 438 | WP_000513703.1 | transcriptional regulator | - |
| QQO08_RS08035 (QQO08_08035) | 1647850..1649217 | - | 1368 | WP_001795330.1 | DEAD/DEAH box helicase | - |
| QQO08_RS08040 (QQO08_08040) | 1649198..1649488 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| QQO08_RS08045 (QQO08_08045) | 1649622..1649726 | + | 105 | WP_011447017.1 | hypothetical protein | - |
| QQO08_RS08050 (QQO08_08050) | 1649829..1652276 | - | 2448 | WP_000884854.1 | virulence-associated E family protein | - |
| QQO08_RS08055 (QQO08_08055) | 1652328..1652528 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| QQO08_RS08060 (QQO08_08060) | 1652596..1652748 | - | 153 | WP_000595269.1 | transcriptional activator RinB | - |
| QQO08_RS08065 (QQO08_08065) | 1652741..1652977 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| QQO08_RS08070 (QQO08_08070) | 1653002..1653238 | - | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| QQO08_RS08075 (QQO08_08075) | 1653275..1653811 | - | 537 | WP_001066444.1 | dUTPase | - |
| QQO08_RS08080 (QQO08_08080) | 1653804..1654214 | - | 411 | WP_000197967.1 | hypothetical protein | - |
| QQO08_RS08085 (QQO08_08085) | 1654571..1654696 | - | 126 | Protein_1591 | DUF1024 family protein | - |
| QQO08_RS08090 (QQO08_08090) | 1654689..1654997 | - | 309 | WP_031895322.1 | hypothetical protein | - |
| QQO08_RS08095 (QQO08_08095) | 1654994..1655340 | - | 347 | Protein_1593 | YopX family protein | - |
| QQO08_RS08100 (QQO08_08100) | 1655337..1655738 | - | 402 | WP_285236768.1 | hypothetical protein | - |
| QQO08_RS08105 (QQO08_08105) | 1655752..1656000 | - | 249 | WP_078150933.1 | SAV1978 family virulence-associated passenger protein | - |
| QQO08_RS08110 (QQO08_08110) | 1656009..1656209 | - | 201 | WP_000235381.1 | hypothetical protein | - |
| QQO08_RS08115 (QQO08_08115) | 1656212..1656469 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| QQO08_RS08120 (QQO08_08120) | 1656469..1656871 | - | 403 | Protein_1598 | SA1788 family PVL leukocidin-associated protein | - |
| QQO08_RS08125 (QQO08_08125) | 1656871..1657056 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| QQO08_RS08130 (QQO08_08130) | 1657069..1659021 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| QQO08_RS08135 (QQO08_08135) | 1659090..1659647 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| QQO08_RS08140 (QQO08_08140) | 1659673..1660839 | - | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| QQO08_RS08145 (QQO08_08145) | 1660836..1661198 | - | 363 | WP_000985983.1 | hypothetical protein | - |
| QQO08_RS08150 (QQO08_08150) | 1661213..1661536 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| QQO08_RS08155 (QQO08_08155) | 1661615..1661776 | - | 162 | WP_001285962.1 | DUF1270 domain-containing protein | - |
| QQO08_RS08160 (QQO08_08160) | 1661788..1662051 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| QQO08_RS08165 (QQO08_08165) | 1662076..1662291 | - | 216 | WP_001097555.1 | hypothetical protein | - |
| QQO08_RS08170 (QQO08_08170) | 1662346..1662711 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| QQO08_RS08175 (QQO08_08175) | 1662680..1662925 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| QQO08_RS08180 (QQO08_08180) | 1662981..1663190 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| QQO08_RS08185 (QQO08_08185) | 1663180..1663323 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| QQO08_RS08190 (QQO08_08190) | 1663352..1664128 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| QQO08_RS08195 (QQO08_08195) | 1664142..1664378 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| QQO08_RS08200 (QQO08_08200) | 1664530..1664844 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | - |
| QQO08_RS08205 (QQO08_08205) | 1664857..1665318 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| QQO08_RS08210 (QQO08_08210) | 1665388..1665921 | + | 534 | WP_251420282.1 | gas vesicle protein GvpG | - |
| QQO08_RS08215 (QQO08_08215) | 1666151..1666297 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| QQO08_RS08220 (QQO08_08220) | 1666294..1666908 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| QQO08_RS08225 (QQO08_08225) | 1667034..1668239 | + | 1206 | WP_020444721.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QQO08_RS08230 (QQO08_08230) | 1668282..1670309 | - | 2028 | WP_001566047.1 | hypothetical protein | - |
| QQO08_RS08235 (QQO08_08235) | 1670302..1671231 | - | 930 | WP_001548912.1 | DUF1672 domain-containing protein | - |
| QQO08_RS08240 (QQO08_08240) | 1671476..1673227 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| QQO08_RS08245 (QQO08_08245) | 1673208..1673933 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| QQO08_RS08250 (QQO08_08250) | 1674066..1674803 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| QQO08_RS08255 (QQO08_08255) | 1674796..1675338 | - | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| QQO08_RS08260 (QQO08_08260) | 1675331..1676062 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| QQO08_RS08265 (QQO08_08265) | 1676154..1676660 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| QQO08_RS08270 (QQO08_08270) | 1676738..1677625 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QQO08_RS08275 (QQO08_08275) | 1677674..1678123 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| QQO08_RS08280 (QQO08_08280) | 1678228..1678770 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| QQO08_RS08285 (QQO08_08285) | 1678852..1679760 | + | 909 | WP_001171351.1 | aldo/keto reductase | - |
| QQO08_RS08290 (QQO08_08290) | 1679976..1680224 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| QQO08_RS08295 (QQO08_08295) | 1680240..1680995 | - | 756 | WP_000678233.1 | SDR family oxidoreductase | - |
| QQO08_RS08300 (QQO08_08300) | 1681137..1681952 | + | 816 | WP_000779747.1 | pyrroline-5-carboxylate reductase | - |
| QQO08_RS08305 (QQO08_08305) | 1682057..1682977 | - | 921 | WP_000454064.1 | ribonuclease Z | - |
| QQO08_RS08310 (QQO08_08310) | 1683290..1684774 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| QQO08_RS08315 (QQO08_08315) | 1685004..1685870 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|