MGE detailed information
MGE type: Prophage MGE length: 63589 bp
Accession: NZ_CP127021 Location: 1620827..1684415 Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M Replicon: chromosome
Accession: NZ_CP127021 Location: 1620827..1684415 Organism: Staphylococcus aureus strain CC239-MRSA-III(var.) isolate Trinidad&Tobago_2020-021_7037M Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQO10_RS07855 (QQO10_07855) | 1616199..1616447 | + | 249 | WP_001151997.1 | ferredoxin | - |
| QQO10_RS07860 (QQO10_07860) | 1616553..1617098 | - | 546 | WP_001186912.1 | ECF transporter S component | - |
| QQO10_RS07865 (QQO10_07865) | 1617377..1617496 | - | 120 | WP_001789947.1 | hypothetical protein | - |
| QQO10_RS07870 (QQO10_07870) | 1617695..1618609 | - | 915 | WP_285236765.1 | DUF1672 domain-containing protein | - |
| QQO10_RS07875 (QQO10_07875) | 1618624..1618830 | - | 207 | WP_001033757.1 | hypothetical protein | - |
| QQO10_RS07880 (QQO10_07880) | 1618823..1619761 | - | 939 | WP_000472936.1 | DUF1672 domain-containing protein | - |
| QQO10_RS07885 (QQO10_07885) | 1619819..1620736 | - | 918 | WP_000476873.1 | DUF1672 domain-containing protein | - |
| QQO10_RS07890 (QQO10_07890) | 1620827..1621042 | - | 216 | WP_000126130.1 | hypothetical protein | - |
| QQO10_RS07895 (QQO10_07895) | 1621764..1623218 | - | 1455 | WP_285236766.1 | N-acetylmuramoyl-L-alanine amidase | - |
| QQO10_RS07900 (QQO10_07900) | 1623229..1623531 | - | 303 | WP_000339144.1 | phage holin | - |
| QQO10_RS07905 (QQO10_07905) | 1623667..1623966 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| QQO10_RS07910 (QQO10_07910) | 1624012..1624176 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| QQO10_RS07915 (QQO10_07915) | 1624169..1624558 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| QQO10_RS07920 (QQO10_07920) | 1624558..1626024 | - | 1467 | WP_000067131.1 | BppU family phage baseplate upper protein | - |
| QQO10_RS07925 (QQO10_07925) | 1626024..1627934 | - | 1911 | WP_285236865.1 | hypothetical protein | - |
| QQO10_RS07930 (QQO10_07930) | 1627950..1628240 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| QQO10_RS07935 (QQO10_07935) | 1628240..1629823 | - | 1584 | WP_000384462.1 | prophage endopeptidase tail family protein | - |
| QQO10_RS07940 (QQO10_07940) | 1629832..1630656 | - | 825 | WP_020444679.1 | phage tail family protein | - |
| QQO10_RS07945 (QQO10_07945) | 1630656..1636856 | - | 6201 | WP_285236767.1 | phage tail tape measure protein | - |
| QQO10_RS07950 (QQO10_07950) | 1636870..1637028 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| QQO10_RS07955 (QQO10_07955) | 1637070..1637420 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| QQO10_RS07960 (QQO10_07960) | 1637478..1637933 | - | 456 | WP_000169128.1 | Ig-like domain-containing protein | - |
| QQO10_RS07965 (QQO10_07965) | 1638025..1638666 | - | 642 | WP_000807532.1 | phage tail protein | - |
| QQO10_RS07970 (QQO10_07970) | 1638701..1639096 | - | 396 | WP_001023802.1 | DUF3168 domain-containing protein | - |
| QQO10_RS07975 (QQO10_07975) | 1639097..1639498 | - | 402 | WP_000110020.1 | hypothetical protein | - |
| QQO10_RS07980 (QQO10_07980) | 1639495..1639827 | - | 333 | WP_000395501.1 | hypothetical protein | - |
| QQO10_RS07985 (QQO10_07985) | 1639839..1640117 | - | 279 | WP_000050975.1 | head-tail connector protein | - |
| QQO10_RS07990 (QQO10_07990) | 1640186..1641349 | - | 1164 | WP_001142735.1 | phage major capsid protein | - |
| QQO10_RS07995 (QQO10_07995) | 1641361..1642134 | - | 774 | WP_000061868.1 | Clp protease ClpP | - |
| QQO10_RS08000 (QQO10_08000) | 1642118..1643356 | - | 1239 | WP_001100670.1 | phage portal protein | - |
| QQO10_RS08005 (QQO10_08005) | 1643361..1645052 | - | 1692 | WP_000153555.1 | terminase large subunit | - |
| QQO10_RS08010 (QQO10_08010) | 1645042..1645347 | - | 306 | WP_000778932.1 | P27 family phage terminase small subunit | - |
| QQO10_RS08015 (QQO10_08015) | 1645476..1645790 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| QQO10_RS08020 (QQO10_08020) | 1645947..1646384 | - | 438 | WP_000513703.1 | transcriptional regulator | - |
| QQO10_RS08025 (QQO10_08025) | 1646397..1647762 | - | 1366 | Protein_1579 | DEAD/DEAH box helicase | - |
| QQO10_RS08030 (QQO10_08030) | 1647743..1648033 | - | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| QQO10_RS08035 (QQO10_08035) | 1648167..1648271 | + | 105 | WP_011447017.1 | hypothetical protein | - |
| QQO10_RS08040 (QQO10_08040) | 1648374..1650821 | - | 2448 | WP_000884854.1 | virulence-associated E family protein | - |
| QQO10_RS08045 (QQO10_08045) | 1650873..1651073 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| QQO10_RS08050 (QQO10_08050) | 1651141..1651293 | - | 153 | WP_000595269.1 | transcriptional activator RinB | - |
| QQO10_RS08055 (QQO10_08055) | 1651286..1651522 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| QQO10_RS08060 (QQO10_08060) | 1651547..1651783 | - | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| QQO10_RS08065 (QQO10_08065) | 1651820..1652356 | - | 537 | WP_001066444.1 | dUTPase | - |
| QQO10_RS08070 (QQO10_08070) | 1652349..1652759 | - | 411 | WP_000197967.1 | hypothetical protein | - |
| QQO10_RS08075 (QQO10_08075) | 1653116..1653241 | - | 126 | Protein_1589 | DUF1024 family protein | - |
| QQO10_RS08080 (QQO10_08080) | 1653234..1653542 | - | 309 | WP_031895322.1 | hypothetical protein | - |
| QQO10_RS08085 (QQO10_08085) | 1653539..1653885 | - | 347 | Protein_1591 | YopX family protein | - |
| QQO10_RS08090 (QQO10_08090) | 1653882..1654283 | - | 402 | WP_285236768.1 | hypothetical protein | - |
| QQO10_RS08095 (QQO10_08095) | 1654297..1654545 | - | 249 | WP_078150933.1 | SAV1978 family virulence-associated passenger protein | - |
| QQO10_RS08100 (QQO10_08100) | 1654554..1654754 | - | 201 | WP_000235381.1 | hypothetical protein | - |
| QQO10_RS08105 (QQO10_08105) | 1654757..1655014 | - | 258 | WP_000111488.1 | DUF3310 domain-containing protein | - |
| QQO10_RS08110 (QQO10_08110) | 1655014..1655416 | - | 403 | Protein_1596 | SA1788 family PVL leukocidin-associated protein | - |
| QQO10_RS08115 (QQO10_08115) | 1655416..1655601 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| QQO10_RS08120 (QQO10_08120) | 1655614..1657566 | - | 1953 | WP_001796208.1 | DNA polymerase | - |
| QQO10_RS08125 (QQO10_08125) | 1657635..1658192 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
| QQO10_RS08130 (QQO10_08130) | 1658218..1659384 | - | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| QQO10_RS08135 (QQO10_08135) | 1659381..1659743 | - | 363 | WP_000985983.1 | hypothetical protein | - |
| QQO10_RS08140 (QQO10_08140) | 1659758..1660081 | - | 324 | WP_000175000.1 | hypothetical protein | - |
| QQO10_RS08145 (QQO10_08145) | 1660160..1660321 | - | 162 | WP_001285962.1 | DUF1270 domain-containing protein | - |
| QQO10_RS08150 (QQO10_08150) | 1660333..1660596 | - | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| QQO10_RS08155 (QQO10_08155) | 1660621..1660836 | - | 216 | WP_001097555.1 | hypothetical protein | - |
| QQO10_RS08160 (QQO10_08160) | 1660891..1661256 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| QQO10_RS08165 (QQO10_08165) | 1661225..1661470 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| QQO10_RS08170 (QQO10_08170) | 1661526..1661735 | + | 210 | WP_000642492.1 | hypothetical protein | - |
| QQO10_RS08175 (QQO10_08175) | 1661725..1661868 | - | 144 | WP_000939498.1 | hypothetical protein | - |
| QQO10_RS08180 (QQO10_08180) | 1661897..1662673 | - | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| QQO10_RS08185 (QQO10_08185) | 1662687..1662923 | - | 237 | WP_001121027.1 | helix-turn-helix transcriptional regulator | - |
| QQO10_RS08190 (QQO10_08190) | 1663075..1663389 | + | 315 | WP_000333630.1 | helix-turn-helix transcriptional regulator | - |
| QQO10_RS08195 (QQO10_08195) | 1663402..1663863 | + | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| QQO10_RS08200 (QQO10_08200) | 1663933..1664466 | + | 534 | WP_251420282.1 | gas vesicle protein GvpG | - |
| QQO10_RS08205 (QQO10_08205) | 1664696..1664842 | + | 147 | WP_001013104.1 | hypothetical protein | - |
| QQO10_RS08210 (QQO10_08210) | 1664839..1665453 | - | 615 | WP_000191459.1 | hypothetical protein | - |
| QQO10_RS08215 (QQO10_08215) | 1665579..1666784 | + | 1206 | WP_020444721.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QQO10_RS08220 (QQO10_08220) | 1666827..1668854 | - | 2028 | WP_001566047.1 | hypothetical protein | - |
| QQO10_RS08225 (QQO10_08225) | 1668847..1669776 | - | 930 | WP_001548912.1 | DUF1672 domain-containing protein | - |
| QQO10_RS08230 (QQO10_08230) | 1670021..1671772 | - | 1752 | WP_000987769.1 | two-component system sensor histidine kinase SrrB | - |
| QQO10_RS08235 (QQO10_08235) | 1671753..1672478 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| QQO10_RS08240 (QQO10_08240) | 1672611..1673348 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| QQO10_RS08245 (QQO10_08245) | 1673341..1673883 | - | 543 | WP_000368653.1 | SMC-Scp complex subunit ScpB | - |
| QQO10_RS08250 (QQO10_08250) | 1673876..1674607 | - | 732 | WP_000273371.1 | segregation/condensation protein A | - |
| QQO10_RS08255 (QQO10_08255) | 1674699..1675205 | + | 507 | WP_001183429.1 | DUF309 domain-containing protein | - |
| QQO10_RS08260 (QQO10_08260) | 1675283..1676170 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QQO10_RS08265 (QQO10_08265) | 1676219..1676668 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| QQO10_RS08270 (QQO10_08270) | 1676773..1677315 | - | 543 | WP_000365246.1 | NUDIX hydrolase | - |
| QQO10_RS08275 (QQO10_08275) | 1677397..1678305 | + | 909 | WP_001171351.1 | aldo/keto reductase | - |
| QQO10_RS08280 (QQO10_08280) | 1678521..1678769 | - | 249 | WP_000995800.1 | hypothetical protein | - |
| QQO10_RS08285 (QQO10_08285) | 1678785..1679540 | - | 756 | WP_000678233.1 | SDR family oxidoreductase | - |
| QQO10_RS08290 (QQO10_08290) | 1679682..1680497 | + | 816 | WP_000779747.1 | pyrroline-5-carboxylate reductase | - |
| QQO10_RS08295 (QQO10_08295) | 1680602..1681522 | - | 921 | WP_000454064.1 | ribonuclease Z | - |
| QQO10_RS08300 (QQO10_08300) | 1681835..1683319 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| QQO10_RS08305 (QQO10_08305) | 1683549..1684415 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| QQO10_RS08310 (QQO10_08310) | 1684498..1686147 | - | 1650 | WP_001041911.1 | alpha-glucosidase | - |
| QQO10_RS08315 (QQO10_08315) | 1686163..1687182 | - | 1020 | WP_000256338.1 | LacI family DNA-binding transcriptional regulator | - |
| QQO10_RS08320 (QQO10_08320) | 1687183..1687437 | - | 255 | WP_001791638.1 | hypothetical protein | - |
| QQO10_RS08325 (QQO10_08325) | 1687376..1687747 | - | 372 | WP_000413437.1 | VOC family protein | - |
| QQO10_RS08330 (QQO10_08330) | 1687966..1689372 | - | 1407 | WP_000193707.1 | NADP-dependent phosphogluconate dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|