MGE detailed information
MGE type: Conjugative plasmid MGE length: 114229 bp
Accession: NZ_CP126954 Location: 1..114229 Organism: Escherichia coli O78:H4 strain APEC E12049 Replicon: plasmid pEND_Eco 12049-2
Accession: NZ_CP126954 Location: 1..114229 Organism: Escherichia coli O78:H4 strain APEC E12049 Replicon: plasmid pEND_Eco 12049-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA22_RS25985 (1502) | 1502..2287 | + | 786 | WP_000983249.1 | IS21 family transposase IS1326 | Transposase |
| QQA22_RS25990 (2463) | 2463..2963 | - | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| QQA22_RS25995 (3091) | 3091..3930 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QQA22_RS26000 (3924) | 3924..4271 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QQA22_RS26005 (4489) | 4489..5724 | - | 1236 | WP_001137513.1 | IS256-like element ISEc58 family transposase | - |
| QQA22_RS26010 (5992) | 5992..7485 | - | 1494 | WP_042038115.1 | IS91 family transposase | - |
| QQA22_RS26015 (7710) | 7710..9347 | - | 1638 | WP_000719078.1 | chaperonin GroEL | - |
| QQA22_RS26020 (9403) | 9403..9690 | - | 288 | WP_024131608.1 | co-chaperone GroES | - |
| QQA22_RS26025 (9930) | 9930..10829 | - | 900 | WP_000131886.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| QQA22_RS26030 (10949) | 10949..11787 | - | 839 | Protein_10 | Streptomycin 3''-adenylyltransferase | ARG |
| QQA22_RS26035 (11936) | 11936..12949 | + | 1014 | WP_000845048.1 | class 1 integron integrase IntI1 | - |
| QQA22_RS26040 (13152) | 13152..13502 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| QQA22_RS26045 (13628) | 13628..14188 | + | 561 | WP_000147567.1 | recombinase family protein | - |
| QQA22_RS26050 (14191) | 14191..17157 | + | 2967 | WP_001138064.1 | Tn3-like element TnAs3 family transposase | - |
| QQA22_RS26055 (17166) | 17166..17582 | + | 417 | WP_031610367.1 | hypothetical protein | - |
| QQA22_RS26060 (18059) | 18059..18325 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| QQA22_RS26065 (18325) | 18325..18819 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| QQA22_RS26070 (18875) | 18875..19477 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QQA22_RS26075 (19831) | 19831..20367 | + | 537 | Protein_19 | protein YagA | - |
| QQA22_RS26080 (20449) | 20449..21677 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| QQA22_RS26085 (21689) | 21689..22513 | + | 825 | Protein_21 | protein YagA | - |
| QQA22_RS26090 (22792) | 22792..24672 | + | 1881 | WP_289245673.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QQA22_RS26095 (24690) | 24690..25037 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| QQA22_RS26100 (25156) | 25156..25503 | + | 348 | WP_000142436.1 | DUF6404 family protein | - |
| QQA22_RS26105 (25521) | 25521..26111 | - | 591 | WP_000194550.1 | hypothetical protein | - |
| QQA22_RS26110 (26111) | 26111..26365 | - | 255 | WP_000343103.1 | hypothetical protein | - |
| QQA22_RS26115 (26717) | 26717..27718 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| QQA22_RS26120 (27894) | 27894..28238 | - | 345 | WP_000793307.1 | hypothetical protein | - |
| QQA22_RS26125 (28737) | 28737..28991 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| QQA22_RS26130 (29036) | 29036..29962 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| QQA22_RS26135 (30494) | 30494..30907 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| QQA22_RS26140 (30909) | 30909..31688 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| QQA22_RS26145 (31868) | 31868..32512 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QQA22_RS26150 (32599) | 32599..32907 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QQA22_RS26155 (33321) | 33321..34301 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QQA22_RS26160 (34294) | 34294..34710 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QQA22_RS26165 (34712) | 34712..35986 | - | 1275 | WP_000457493.1 | Y-family DNA polymerase | - |
| QQA22_RS26170 (35986) | 35986..36423 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QQA22_RS26175 (36420) | 36420..36668 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QQA22_RS26180 (37086) | 37086..37988 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| QQA22_RS26185 (37985) | 37985..38296 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| QQA22_RS26190 (38373) | 38373..39056 | + | 684 | WP_000086178.1 | DNA methylase | - |
| QQA22_RS26195 (39057) | 39057..39278 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| QQA22_RS26200 (39238) | 39238..39724 | + | 487 | Protein_44 | DUF1380 family protein | - |
| QQA22_RS26205 (39775) | 39775..40545 | + | 771 | WP_024133193.1 | hypothetical protein | - |
| QQA22_RS26210 (40963) | 40963..41388 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QQA22_RS26215 (41435) | 41435..41857 | + | 423 | WP_000271725.1 | DUF1380 family protein | - |
| QQA22_RS26220 (41854) | 41854..42045 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| QQA22_RS26225 (42236) | 42236..42613 | - | 378 | WP_052987349.1 | hypothetical protein | - |
| QQA22_RS26230 (42815) | 42815..43342 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| QQA22_RS26235 (43400) | 43400..43633 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| QQA22_RS26240 (43692) | 43692..45650 | + | 1959 | WP_001145458.1 | ParB/RepB/Spo0J family partition protein | - |
| QQA22_RS26245 (45705) | 45705..46139 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QQA22_RS26250 (46136) | 46136..46855 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| QQA22_RS26255 (46985) | 46985..48160 | + | 1176 | WP_000942657.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QQA22_RS26260 (48607) | 48607..49107 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| QQA22_RS26265 (49836) | 49836..50270 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QQA22_RS26270 (50364) | 50364..50630 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QQA22_RS26275 (50695) | 50695..51597 | + | 903 | WP_000038404.1 | ISNCY family transposase ISRor2 | VF |
| QQA22_RS26280 (51597) | 51597..51878 | + | 282 | WP_001334682.1 | hypothetical protein | VF |
| QQA22_RS26285 (51909) | 51909..52160 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QQA22_RS26290 (52741) | 52741..53589 | + | 849 | WP_001077027.1 | DUF4942 domain-containing protein | - |
| QQA22_RS26295 (53675) | 53675..54010 | - | 336 | WP_000157086.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QQA22_RS26300 (54244) | 54244..54576 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QQA22_RS26305 (54587) | 54587..57286 | + | 2700 | WP_001474686.1 | hypothetical protein | Relaxase |
| QQA22_RS26310 (57323) | 57323..59614 | - | 2292 | WP_001289271.1 | F-type conjugative transfer protein TrbC | - |
| QQA22_RS26315 (59607) | 59607..60677 | - | 1071 | WP_000151575.1 | IncI1-type conjugal transfer protein TrbB | - |
| QQA22_RS26320 (60696) | 60696..61904 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (62084) | 62084..62146 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (62084) | 62084..62146 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (62084) | 62084..62146 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (62084) | 62084..62146 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QQA22_RS26325 (62196) | 62196..62348 | + | 153 | WP_001303307.1 | Hok/Gef family protein | Toxin Detail |
| QQA22_RS26330 (62420) | 62420..62671 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - (63058) | 63058..63109 | - | 52 | NuclAT_1 | - | - |
| - (63058) | 63058..63109 | - | 52 | NuclAT_1 | - | - |
| - (63058) | 63058..63109 | - | 52 | NuclAT_1 | - | - |
| - (63058) | 63058..63109 | - | 52 | NuclAT_1 | - | - |
| QQA22_RS26335 (63595) | 63595..63771 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| QQA22_RS26340 (64163) | 64163..64372 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QQA22_RS26345 (64444) | 64444..65106 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QQA22_RS26350 (65177) | 65177..67345 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| QQA22_RS26355 (67442) | 67442..68026 | - | 585 | WP_001037998.1 | conjugal transfer protein TraX | - |
| QQA22_RS26360 (68055) | 68055..69257 | - | 1203 | WP_001189158.1 | IncI1-type conjugal transfer protein TraW | - |
| QQA22_RS26365 (69224) | 69224..69838 | - | 615 | WP_000337394.1 | IncI1-type conjugal transfer protein TraV | - |
| QQA22_RS26370 (69838) | 69838..72882 | - | 3045 | WP_001024752.1 | IncI1-type conjugal transfer protein TraU | - |
| QQA22_RS26375 (72972) | 72972..73772 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QQA22_RS26380 (73756) | 73756..73944 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QQA22_RS26385 (74008) | 74008..74412 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QQA22_RS26390 (74463) | 74463..74990 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QQA22_RS26395 (74990) | 74990..75694 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QQA22_RS26400 (75694) | 75694..76983 | - | 1290 | WP_001271997.1 | conjugal transfer protein TraO | - |
| QQA22_RS26405 (76986) | 76986..77969 | - | 984 | WP_001191878.1 | hypothetical protein | VF |
| QQA22_RS26410 (77980) | 77980..78672 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QQA22_RS26415 (78669) | 78669..79016 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QQA22_RS26420 (79034) | 79034..82801 | - | 3768 | WP_001141535.1 | DUF5710 domain-containing protein | - |
| QQA22_RS26425 (82891) | 82891..83442 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QQA22_RS26430 (83457) | 83457..83747 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QQA22_RS26435 (83744) | 83744..84892 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QQA22_RS26440 (84889) | 84889..85707 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QQA22_RS26445 (85704) | 85704..86162 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QQA22_RS26450 (86557) | 86557..87141 | - | 585 | WP_000977517.1 | histidine phosphatase family protein | - |
| QQA22_RS26455 (87201) | 87201..88403 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QQA22_RS26460 (88489) | 88489..89313 | - | 825 | WP_001238927.1 | conjugal transfer protein TraE | - |
| QQA22_RS26465 (89464) | 89464..90618 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| QQA22_RS26470 (91309) | 91309..91557 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QQA22_RS26475 (91554) | 91554..92846 | - | 1293 | WP_032274560.1 | hypothetical protein | VF |
| QQA22_RS26480 (92846) | 92846..93502 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QQA22_RS26485 (93487) | 93487..94047 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QQA22_RS26490 (94057) | 94057..94671 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QQA22_RS26495 (94689) | 94689..95786 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
| QQA22_RS26500 (95799) | 95799..97352 | - | 1554 | WP_000362202.1 | hypothetical protein | VF |
| QQA22_RS26505 (97363) | 97363..97815 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QQA22_RS26510 (97802) | 97802..99097 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QQA22_RS26515 (99090) | 99090..100772 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QQA22_RS26520 (100786) | 100786..101223 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QQA22_RS26525 (101223) | 101223..102290 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| QQA22_RS26530 (102964) | 102964..103416 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| QQA22_RS26535 (103459) | 103459..103713 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QQA22_RS26540 (103981) | 103981..104547 | - | 567 | WP_000776428.1 | protein TraD | - |
| QQA22_RS26545 (104561) | 104561..105244 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QQA22_RS26550 (105498) | 105498..106031 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QQA22_RS26555 (106473) | 106473..106760 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QQA22_RS26560 (106678) | 106678..106908 | - | 231 | WP_228772074.1 | ash family protein | - |
| QQA22_RS26565 (107914) | 107914..108945 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| QQA22_RS26570 (109641) | 109641..109799 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| QQA22_RS26575 (109854) | 109854..110123 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | - |
| QQA22_RS26580 (110123) | 110123..110401 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QQA22_RS26585 (110441) | 110441..111289 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| QQA22_RS26590 (111526) | 111526..111651 | - | 126 | Protein_122 | MerR family transcriptional regulator | - |
| QQA22_RS26595 (111646) | 111646..113256 | + | 1611 | Protein_123 | DDE-type integrase/transposase/recombinase | - |
| QQA22_RS26600 (113259) | 113259..114119 | + | 861 | WP_000344784.1 | TniB family NTP-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|