MGE detailed information
MGE type: IScluster/Tn MGE length: 17324 bp
Accession: NZ_CP126953 Location: 24085..41408 Organism: Escherichia coli O78:H4 strain APEC E12049 Replicon: plasmid pEND_Eco 12049-1
Accession: NZ_CP126953 Location: 24085..41408 Organism: Escherichia coli O78:H4 strain APEC E12049 Replicon: plasmid pEND_Eco 12049-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA22_RS25260 (22166) | 22166..22912 | + | 747 | WP_039005755.1 | conjugal transfer pilus acetylase TraX | - |
| QQA22_RS25265 (22967) | 22967..23527 | + | 561 | WP_039005753.1 | fertility inhibition protein FinO | - |
| QQA22_RS25270 (23663) | 23663..23875 | + | 213 | WP_001299730.1 | ANR family transcriptional regulator | - |
| QQA22_RS25275 (24085) | 24085..25656 | - | 1572 | WP_113255196.1 | IS66 family transposase ISCro1 | Transposase |
| QQA22_RS25280 (25676) | 25676..26023 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| QQA22_RS25285 (26023) | 26023..26700 | - | 678 | WP_001339397.1 | IS66 family transposase ISCro1 | Transposase |
| QQA22_RS25290 (26828) | 26828..26902 | + | 75 | Protein_26 | endonuclease | - |
| - (27158) | 27158..27219 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (27158) | 27158..27219 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (27158) | 27158..27219 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| - (27158) | 27158..27219 | - | 62 | NuclAT_1 | - | Antitoxin Detail |
| QQA22_RS25295 (27263) | 27263..27412 | + | 150 | WP_001312851.1 | Hok/Gef family protein | Toxin Detail |
| QQA22_RS25300 (27696) | 27696..27953 | + | 258 | WP_000083845.1 | replication regulatory protein RepA | - |
| QQA22_RS25305 (27970) | 27970..28221 | - | 252 | WP_223195197.1 | replication protein RepA | - |
| QQA22_RS25310 (28212) | 28212..28259 | + | 48 | WP_229471593.1 | hypothetical protein | - |
| QQA22_RS25315 (28252) | 28252..28734 | + | 483 | WP_001273588.1 | hypothetical protein | - |
| QQA22_RS25320 (28727) | 28727..29584 | + | 858 | WP_000774297.1 | incFII family plasmid replication initiator RepA | - |
| QQA22_RS25325 (30547) | 30547..30798 | + | 252 | WP_001132900.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QQA22_RS25330 (30795) | 30795..31082 | + | 288 | WP_000222766.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QQA22_RS25340 (32833) | 32833..36966 | + | 4134 | WP_001080138.1 | Hemoglobin-binding protease hbp autotransporter | VF |
| QQA22_RS25345 (37078) | 37078..37454 | + | 377 | Protein_37 | IS1-like element IS1A family transposase | - |
| QQA22_RS25350 (37493) | 37493..39031 | - | 1539 | WP_000997962.1 | IS66 family transposase ISEc8 | Transposase |
| QQA22_RS25355 (39081) | 39081..39428 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| QQA22_RS25360 (39425) | 39425..39805 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| QQA22_RS25365 (39899) | 39899..40225 | + | 327 | Protein_41 | IS1 family transposase IS1S | Transposase |
| QQA22_RS25370 (40405) | 40405..40918 | - | 514 | Protein_42 | DUF4113 domain-containing protein | - |
| QQA22_RS25375 (40979) | 40979..41083 | - | 105 | Protein_43 | AAA family ATPase | - |
| QQA22_RS25380 (41085) | 41085..41408 | - | 324 | Protein_44 | IS21 family transposase IS21 | Transposase |
| QQA22_RS25385 (42152) | 42152..43129 | + | 978 | WP_000361611.1 | RepB family plasmid replication initiator protein | - |
| QQA22_RS25390 (43415) | 43415..44155 | - | 741 | WP_001603634.1 | tyrosine-type recombinase/integrase | - |
| QQA22_RS25395 (44276) | 44276..44464 | - | 189 | WP_032145890.1 | hypothetical protein | - |
| QQA22_RS25400 (44838) | 44838..45740 | - | 903 | WP_001312822.1 | antimicrobial resistance protein Mig-14 | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|