MGE detailed information
MGE type: Conjugative plasmid MGE length: 115173 bp
Accession: NZ_CP126950 Location: 1..115173 Organism: Escherichia coli O78:H4 strain APEC E14033 Replicon: plasmid pEND_Eco 14033-2
Accession: NZ_CP126950 Location: 1..115173 Organism: Escherichia coli O78:H4 strain APEC E14033 Replicon: plasmid pEND_Eco 14033-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA23_RS25185 (332) | 332..784 | - | 453 | WP_001247336.1 | hypothetical protein | VF |
| QQA23_RS25190 (771) | 771..2066 | - | 1296 | WP_000752774.1 | type 4b pilus protein PilO2 | - |
| QQA23_RS25195 (2059) | 2059..3741 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QQA23_RS25200 (3755) | 3755..4192 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QQA23_RS25205 (4192) | 4192..5259 | - | 1068 | WP_000742600.1 | hypothetical protein | VF |
| QQA23_RS25210 (5933) | 5933..6385 | - | 453 | WP_000008892.1 | hypothetical protein | - |
| QQA23_RS25215 (6428) | 6428..6682 | - | 255 | WP_001136192.1 | PilI type IV pilus biogenesis protein | - |
| QQA23_RS25220 (6950) | 6950..7516 | - | 567 | WP_000776428.1 | protein TraD | - |
| QQA23_RS25225 (7530) | 7530..8213 | - | 684 | WP_000213857.1 | conjugal transfer protein TraC | - |
| QQA23_RS25230 (8467) | 8467..9000 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| QQA23_RS25235 (9442) | 9442..9729 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QQA23_RS25240 (9647) | 9647..9877 | - | 231 | WP_228772074.1 | ash family protein | - |
| QQA23_RS25245 (10883) | 10883..11914 | + | 1032 | WP_000907873.1 | plasmid replication initiator RepA | - |
| QQA23_RS25250 (12610) | 12610..12768 | + | 159 | WP_000841008.1 | hypothetical protein | - |
| QQA23_RS25255 (12823) | 12823..13092 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QQA23_RS25260 (13092) | 13092..13370 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QQA23_RS25265 (13410) | 13410..14258 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| QQA23_RS25270 (14375) | 14375..14848 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| QQA23_RS25275 (15325) | 15325..15591 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| QQA23_RS25280 (15591) | 15591..16085 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| QQA23_RS25285 (16141) | 16141..16743 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QQA23_RS25290 (17097) | 17097..18443 | + | 1347 | WP_001132032.1 | protein YagA | - |
| QQA23_RS25295 (18722) | 18722..20602 | + | 1881 | WP_039025981.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QQA23_RS25300 (20620) | 20620..20967 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| QQA23_RS25305 (21210) | 21210..22070 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QQA23_RS25310 (22891) | 22891..24261 | - | 1371 | WP_000971921.1 | IS1182 family transposase ISCfr1 | Transposase |
| QQA23_RS25315 (24376) | 24376..25512 | - | 1137 | WP_000080860.1 | DUF3883 domain-containing protein | - |
| QQA23_RS25320 (25563) | 25563..25790 | - | 228 | WP_000248278.1 | hypothetical protein | - |
| QQA23_RS25325 (25814) | 25814..26005 | + | 192 | WP_000951934.1 | hypothetical protein | - |
| QQA23_RS25330 (26487) | 26487..27029 | - | 543 | WP_000587837.1 | AAA family ATPase | - |
| QQA23_RS25335 (27042) | 27042..27902 | - | 861 | WP_000557454.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| QQA23_RS25340 (28045) | 28045..28890 | + | 846 | Protein_32 | IS4 family transposase IS10R | Transposase |
| QQA23_RS25345 (28956) | 28956..29660 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QQA23_RS25350 (29711) | 29711..30694 | - | 984 | Protein_34 | TonB-dependent receptor | - |
| QQA23_RS25355 (30751) | 30751..31719 | - | 969 | WP_013362812.1 | IS5 family transposase IS903B | Transposase |
| QQA23_RS25360 (31754) | 31754..32629 | - | 876 | WP_001617865.1 | Beta-lactamase CTX-M-97 | ARG |
| QQA23_RS25365 (32879) | 32879..34141 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QQA23_RS25370 (34342) | 34342..35373 | + | 1032 | WP_014342102.1 | IS66 family transposase ISPsy43 | VF |
| QQA23_RS25375 (35562) | 35562..35978 | - | 417 | Protein_39 | DNA-binding protein | - |
| QQA23_RS25380 (36009) | 36009..36581 | - | 573 | WP_001568017.1 | hypothetical protein | - |
| QQA23_RS25385 (36578) | 36578..36826 | - | 249 | WP_001568018.1 | hypothetical protein | - |
| QQA23_RS25390 (37272) | 37272..38999 | + | 1728 | WP_001568019.1 | ATP-binding protein | - |
| QQA23_RS25395 (38996) | 38996..40411 | + | 1416 | WP_001568020.1 | AAA family ATPase | - |
| QQA23_RS25400 (41011) | 41011..43815 | + | 2805 | WP_001568022.1 | hypothetical protein | - |
| QQA23_RS25405 (43960) | 43960..44988 | - | 1029 | WP_001568023.1 | Abi family protein | - |
| QQA23_RS25410 (45129) | 45129..45698 | - | 570 | WP_016162066.1 | hypothetical protein | - |
| QQA23_RS25415 (46253) | 46253..46666 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| QQA23_RS25420 (46668) | 46668..47447 | + | 780 | WP_001164198.1 | site-specific integrase | - |
| QQA23_RS25425 (47627) | 47627..48271 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QQA23_RS25430 (48358) | 48358..48663 | + | 306 | WP_021577244.1 | hypothetical protein | - |
| QQA23_RS25435 (49080) | 49080..50060 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QQA23_RS25440 (50053) | 50053..50469 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QQA23_RS25445 (50471) | 50471..51745 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| QQA23_RS25450 (51745) | 51745..52182 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QQA23_RS25455 (52179) | 52179..52427 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QQA23_RS25460 (52845) | 52845..53747 | + | 903 | WP_072748703.1 | DUF1281 domain-containing protein | - |
| QQA23_RS25465 (53751) | 53751..54056 | + | 306 | WP_015058890.1 | hypothetical protein | - |
| QQA23_RS25470 (54132) | 54132..54815 | + | 684 | WP_030003447.1 | DNA methylase | - |
| QQA23_RS25475 (54816) | 54816..55037 | + | 222 | WP_001104885.1 | hypothetical protein | - |
| QQA23_RS25480 (55018) | 55018..55484 | + | 467 | Protein_60 | DUF1380 family protein | - |
| QQA23_RS25485 (55535) | 55535..56305 | + | 771 | WP_001434682.1 | hypothetical protein | - |
| QQA23_RS25490 (56722) | 56722..57147 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QQA23_RS25495 (57194) | 57194..57616 | + | 423 | WP_000271734.1 | DUF1380 family protein | - |
| QQA23_RS25500 (57613) | 57613..57804 | + | 192 | WP_031942274.1 | hypothetical protein | - |
| QQA23_RS25505 (58137) | 58137..58205 | - | 69 | Protein_65 | pilus protein | - |
| QQA23_RS25510 (58574) | 58574..59101 | + | 528 | WP_029391983.1 | single-stranded DNA-binding protein | - |
| QQA23_RS25515 (59159) | 59159..59392 | + | 234 | WP_021534894.1 | DUF905 domain-containing protein | - |
| QQA23_RS25520 (59456) | 59456..61414 | + | 1959 | WP_031942276.1 | ParB/RepB/Spo0J family partition protein | - |
| QQA23_RS25525 (61469) | 61469..61903 | + | 435 | WP_001535709.1 | conjugation system SOS inhibitor PsiB | - |
| QQA23_RS25530 (61900) | 61900..62619 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QQA23_RS25535 (62616) | 62616..63212 | + | 597 | WP_030003450.1 | hypothetical protein | - |
| QQA23_RS25540 (63675) | 63675..64175 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| QQA23_RS25545 (64904) | 64904..65338 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QQA23_RS25550 (65432) | 65432..65698 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QQA23_RS25555 (65763) | 65763..66665 | + | 903 | WP_030003452.1 | ISNCY family transposase ISRor2 | VF |
| QQA23_RS25560 (66665) | 66665..66922 | + | 258 | WP_016231861.1 | hypothetical protein | VF |
| QQA23_RS25565 (66953) | 66953..67204 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QQA23_RS25570 (67238) | 67238..67540 | - | 303 | WP_030003453.1 | hypothetical protein | - |
| QQA23_RS25575 (67784) | 67784..68632 | + | 849 | WP_001077047.1 | DUF4942 domain-containing protein | - |
| QQA23_RS25580 (68717) | 68717..69052 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| QQA23_RS25585 (69286) | 69286..69618 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QQA23_RS25590 (69629) | 69629..72328 | + | 2700 | WP_001306778.1 | hypothetical protein | Relaxase |
| QQA23_RS25595 (72365) | 72365..74656 | - | 2292 | WP_001289276.1 | F-type conjugative transfer protein TrbC | - |
| QQA23_RS25600 (74649) | 74649..75719 | - | 1071 | WP_000151582.1 | IncI1-type conjugal transfer protein TrbB | - |
| QQA23_RS25605 (75738) | 75738..76946 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (77126) | 77126..77188 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (77126) | 77126..77188 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (77126) | 77126..77188 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (77126) | 77126..77188 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QQA23_RS25610 (77238) | 77238..77390 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| QQA23_RS25615 (77462) | 77462..77713 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| QQA23_RS25620 (78212) | 78212..78307 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QQA23_RS25625 (78372) | 78372..78548 | - | 177 | WP_001054897.1 | hypothetical protein | - |
| QQA23_RS25630 (78940) | 78940..79149 | + | 210 | WP_039025903.1 | HEAT repeat domain-containing protein | - |
| QQA23_RS25635 (79221) | 79221..79883 | - | 663 | WP_000644796.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QQA23_RS25640 (79954) | 79954..82122 | - | 2169 | WP_000698354.1 | DotA/TraY family protein | - |
| QQA23_RS25645 (82219) | 82219..82803 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| QQA23_RS25650 (82832) | 82832..84034 | - | 1203 | WP_001385654.1 | IncI1-type conjugal transfer protein TraW | - |
| QQA23_RS25655 (84001) | 84001..84615 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| QQA23_RS25660 (84615) | 84615..87659 | - | 3045 | WP_001024780.1 | IncI1-type conjugal transfer protein TraU | - |
| QQA23_RS25665 (87749) | 87749..88549 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QQA23_RS25670 (88533) | 88533..88721 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QQA23_RS25675 (88785) | 88785..89189 | - | 405 | WP_000086958.1 | IncI1-type conjugal transfer protein TraR | - |
| QQA23_RS25680 (89240) | 89240..89767 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QQA23_RS25685 (89767) | 89767..90471 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QQA23_RS25690 (90471) | 90471..91760 | - | 1290 | WP_001272003.1 | conjugal transfer protein TraO | - |
| QQA23_RS25695 (91763) | 91763..92746 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| QQA23_RS25700 (92757) | 92757..93449 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| QQA23_RS25705 (93446) | 93446..93793 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QQA23_RS25710 (93811) | 93811..97578 | - | 3768 | WP_031942279.1 | DUF5710 domain-containing protein | - |
| QQA23_RS25715 (97668) | 97668..98219 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| QQA23_RS25720 (98234) | 98234..98524 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QQA23_RS25725 (98521) | 98521..99669 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QQA23_RS25730 (99666) | 99666..100484 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| QQA23_RS25735 (100481) | 100481..100939 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QQA23_RS25740 (101375) | 101375..102605 | - | 1231 | Protein_112 | IS3 family transposase IS2 | Transposase |
| QQA23_RS25745 (102647) | 102647..103255 | - | 609 | WP_289245575.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| QQA23_RS25750 (103362) | 103362..104342 | + | 981 | WP_000019402.1 | IS5 family transposase IS5D | Transposase |
| QQA23_RS25755 (104514) | 104514..105716 | - | 1203 | WP_000976351.1 | conjugal transfer protein TraF | - |
| QQA23_RS25760 (105801) | 105801..106625 | - | 825 | WP_001238939.1 | conjugal transfer protein TraE | - |
| QQA23_RS25765 (106776) | 106776..107930 | - | 1155 | WP_001139957.1 | site-specific integrase | - |
| QQA23_RS25770 (109451) | 109451..109699 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| QQA23_RS25775 (109696) | 109696..110988 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QQA23_RS25780 (110988) | 110988..111644 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QQA23_RS25785 (111629) | 111629..112189 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QQA23_RS25790 (112199) | 112199..112813 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QQA23_RS25795 (112831) | 112831..113928 | - | 1098 | WP_001208805.1 | hypothetical protein | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|