MGE detailed information
MGE type: Conjugative plasmid MGE length: 110406 bp
Accession: NZ_CP126935 Location: 1..110406 Organism: Escherichia coli O78:H4 strain APEC E19057 Replicon: plasmid pEND_Eco19057-1
Accession: NZ_CP126935 Location: 1..110406 Organism: Escherichia coli O78:H4 strain APEC E19057 Replicon: plasmid pEND_Eco19057-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QQA26_RS24030 (1) | 1..501 | + | 501 | WP_000117622.1 | antirestriction protein ArdA | - |
| QQA26_RS24035 (1230) | 1230..1664 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QQA26_RS24040 (1758) | 1758..2024 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QQA26_RS24045 (2089) | 2089..2967 | + | 879 | WP_000038331.1 | ISNCY family transposase ISRor2 | VF |
| QQA26_RS24050 (3029) | 3029..3235 | + | 207 | WP_001532090.1 | hypothetical protein | VF |
| QQA26_RS24055 (3266) | 3266..3517 | - | 252 | WP_000148286.1 | helix-turn-helix transcriptional regulator | - |
| QQA26_RS24060 (3551) | 3551..3853 | - | 303 | WP_289266621.1 | hypothetical protein | - |
| QQA26_RS24065 (4097) | 4097..4945 | + | 849 | WP_001077032.1 | DUF4942 domain-containing protein | - |
| QQA26_RS24070 (5031) | 5031..5366 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QQA26_RS24075 (5600) | 5600..5932 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QQA26_RS24080 (5943) | 5943..8642 | + | 2700 | WP_039005629.1 | hypothetical protein | Relaxase |
| QQA26_RS24085 (8668) | 8668..9240 | + | 573 | WP_000332079.1 | hypothetical protein | - |
| QQA26_RS24090 (9290) | 9290..11479 | - | 2190 | WP_000443942.1 | peptidase domain-containing ABC transporter | - |
| QQA26_RS24095 (11479) | 11479..12732 | - | 1254 | WP_001685252.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| QQA26_RS24100 (12835) | 12835..13197 | - | 363 | WP_085004988.1 | CPBP family intramembrane metalloprotease | - |
| QQA26_RS24105 (14255) | 14255..16546 | - | 2292 | WP_072742854.1 | F-type conjugative transfer protein TrbC | - |
| QQA26_RS24110 (16539) | 16539..17609 | - | 1071 | WP_039005625.1 | IncI1-type conjugal transfer protein TrbB | - |
| QQA26_RS24115 (17628) | 17628..18836 | - | 1209 | WP_039005623.1 | IncI1-type conjugal transfer protein TrbA | - |
| - (19016) | 19016..19078 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (19016) | 19016..19078 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (19016) | 19016..19078 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (19016) | 19016..19078 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QQA26_RS24120 (19128) | 19128..19280 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| QQA26_RS24125 (19352) | 19352..19603 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| QQA26_RS24130 (20102) | 20102..20197 | + | 96 | WP_001303310.1 | DinQ-like type I toxin DqlB | - |
| QQA26_RS24135 (20262) | 20262..20438 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| QQA26_RS24140 (20830) | 20830..21039 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QQA26_RS24145 (21111) | 21111..21761 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QQA26_RS24150 (21835) | 21835..24003 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| QQA26_RS24155 (24100) | 24100..24684 | - | 585 | WP_001476649.1 | IncI1-type conjugal transfer protein TraX | - |
| QQA26_RS24160 (24713) | 24713..25915 | - | 1203 | WP_001189156.1 | IncI1-type conjugal transfer protein TraW | - |
| QQA26_RS24165 (25882) | 25882..26496 | - | 615 | WP_289266622.1 | IncI1-type conjugal transfer protein TraV | - |
| QQA26_RS24170 (26496) | 26496..29540 | - | 3045 | WP_069722551.1 | IncI1-type conjugal transfer protein TraU | - |
| QQA26_RS24175 (29630) | 29630..30430 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QQA26_RS24180 (30414) | 30414..30602 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QQA26_RS24185 (30666) | 30666..31070 | - | 405 | WP_021497835.1 | IncI1-type conjugal transfer protein TraR | - |
| QQA26_RS24190 (31121) | 31121..31648 | - | 528 | WP_045133141.1 | conjugal transfer protein TraQ | - |
| QQA26_RS24195 (31648) | 31648..32352 | - | 705 | WP_001493811.1 | IncI1-type conjugal transfer protein TraP | - |
| QQA26_RS24200 (32352) | 32352..33641 | - | 1290 | WP_001271991.1 | conjugal transfer protein TraO | - |
| QQA26_RS24205 (33644) | 33644..34627 | - | 984 | WP_001191880.1 | hypothetical protein | VF |
| QQA26_RS24210 (34638) | 34638..35330 | - | 693 | WP_000138551.1 | DotI/IcmL family type IV secretion protein | - |
| QQA26_RS24215 (35327) | 35327..35674 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QQA26_RS24220 (35692) | 35692..39456 | - | 3765 | WP_045133142.1 | DUF5710 domain-containing protein | - |
| QQA26_RS24225 (39546) | 39546..40097 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| QQA26_RS24230 (40112) | 40112..40402 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QQA26_RS24235 (40399) | 40399..41547 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QQA26_RS24240 (41544) | 41544..42362 | - | 819 | WP_032220737.1 | hypothetical protein | VF |
| QQA26_RS24245 (42359) | 42359..42817 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QQA26_RS24250 (43212) | 43212..43796 | - | 585 | WP_045133143.1 | lipopolysaccharide core heptose(II)-phosphate phosphatase | - |
| QQA26_RS24255 (43856) | 43856..45058 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QQA26_RS24260 (45144) | 45144..45968 | - | 825 | WP_001690630.1 | conjugal transfer protein TraE | - |
| QQA26_RS24265 (46119) | 46119..47273 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| QQA26_RS24270 (48077) | 48077..48325 | - | 249 | WP_001349157.1 | hypothetical protein | - |
| QQA26_RS24275 (48997) | 48997..50331 | - | 1335 | WP_077134950.1 | hypothetical protein | VF |
| QQA26_RS24280 (50331) | 50331..50987 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| QQA26_RS24285 (50972) | 50972..51532 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| QQA26_RS24290 (51542) | 51542..52156 | - | 615 | WP_000908226.1 | hypothetical protein | VF |
| QQA26_RS24295 (52173) | 52173..53258 | - | 1086 | WP_001208802.1 | hypothetical protein | VF |
| QQA26_RS24300 (53271) | 53271..54824 | - | 1554 | WP_000362206.1 | hypothetical protein | VF |
| QQA26_RS24305 (54835) | 54835..55287 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| QQA26_RS24310 (55274) | 55274..56569 | - | 1296 | WP_000752780.1 | type 4b pilus protein PilO2 | - |
| QQA26_RS24315 (56562) | 56562..58244 | - | 1683 | WP_000748143.1 | hypothetical protein | VF |
| QQA26_RS24320 (58258) | 58258..58695 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QQA26_RS24325 (58695) | 58695..59762 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| QQA26_RS24330 (60734) | 60734..61108 | - | 375 | WP_001690634.1 | PilI type IV pilus biogenesis protein | - |
| QQA26_RS24335 (61280) | 61280..61963 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QQA26_RS24340 (62216) | 62216..62749 | - | 534 | WP_001306770.1 | transcription termination/antitermination NusG family protein | - |
| QQA26_RS24345 (63191) | 63191..63478 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QQA26_RS24350 (63396) | 63396..63626 | - | 231 | WP_228772074.1 | ash family protein | - |
| QQA26_RS24355 (64632) | 64632..65663 | + | 1032 | WP_044706701.1 | plasmid replication initiator RepA | - |
| QQA26_RS24360 (66572) | 66572..66841 | + | 270 | WP_032181987.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QQA26_RS24365 (66841) | 66841..67119 | + | 279 | WP_001384452.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QQA26_RS24370 (67159) | 67159..68007 | + | 849 | WP_001057996.1 | 3'-5' exonuclease | - |
| QQA26_RS24375 (68124) | 68124..68597 | + | 474 | WP_077128838.1 | hypothetical protein | - |
| QQA26_RS24380 (69074) | 69074..69340 | - | 267 | WP_000627831.1 | hypothetical protein | - |
| QQA26_RS24385 (69340) | 69340..69834 | - | 495 | WP_001350009.1 | hypothetical protein | - |
| QQA26_RS24390 (69890) | 69890..70492 | - | 603 | WP_289266615.1 | ProQ/FINO family protein | - |
| QQA26_RS24395 (70846) | 70846..72192 | + | 1347 | WP_001132021.1 | protein YagA | - |
| QQA26_RS24400 (72471) | 72471..74351 | + | 1881 | WP_032221836.1 | colicin Ia central receptor-binding domain-containing protein | - |
| QQA26_RS24405 (74368) | 74368..74703 | - | 336 | WP_045133168.1 | colicin E1 family microcin immunity protein | - |
| QQA26_RS24410 (74832) | 74832..75179 | + | 348 | WP_000142443.1 | DUF6404 family protein | - |
| QQA26_RS24415 (75197) | 75197..75787 | - | 591 | WP_045133249.1 | hypothetical protein | - |
| QQA26_RS24420 (75787) | 75787..76044 | - | 258 | WP_000371887.1 | hypothetical protein | - |
| QQA26_RS24425 (76373) | 76373..76825 | + | 453 | WP_000670961.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose 3-N-acetyltransferase | VF |
| QQA26_RS24430 (76935) | 76935..77390 | - | 456 | WP_045133248.1 | IS200-IS605 family transposase IS200C | Transposase |
| QQA26_RS24435 (77608) | 77608..78090 | - | 483 | WP_289266616.1 | hypothetical protein | - |
| QQA26_RS24440 (78583) | 78583..79005 | - | 423 | WP_045133246.1 | Protein AggB | VF |
| QQA26_RS24445 (79022) | 79022..81169 | - | 2148 | WP_289266617.1 | F1 capsule-anchoring protein | VF |
| QQA26_RS24455 (82533) | 82533..82916 | - | 384 | WP_289266618.1 | hypothetical protein | VF |
| QQA26_RS24460 (83044) | 83044..83799 | - | 756 | WP_024198451.1 | Chaperone protein caf1M | VF |
| QQA26_RS24465 (83988) | 83988..84197 | - | 210 | WP_000929752.1 | hypothetical protein | VF |
| QQA26_RS24470 (85020) | 85020..85808 | + | 789 | WP_130525263.1 | site-specific integrase | - |
| QQA26_RS24475 (85981) | 85981..86340 | + | 360 | WP_289266619.1 | colicin M immunity protein | - |
| QQA26_RS24480 (86390) | 86390..86536 | - | 147 | Protein_90 | lipid II-degrading bacteriocin | - |
| QQA26_RS24485 (87226) | 87226..87573 | + | 348 | WP_066019393.1 | DUF6404 family protein | - |
| QQA26_RS24490 (87591) | 87591..87776 | - | 186 | Protein_92 | hypothetical protein | - |
| QQA26_RS24495 (88002) | 88002..91817 | + | 3816 | WP_231828659.1 | hypothetical protein | - |
| QQA26_RS24500 (92451) | 92451..92720 | + | 270 | WP_001168933.1 | hypothetical protein | - |
| QQA26_RS24505 (92713) | 92713..93402 | + | 690 | WP_000796232.1 | hypothetical protein | - |
| QQA26_RS24510 (93399) | 93399..94187 | + | 789 | WP_000016498.1 | site-specific integrase | - |
| QQA26_RS24515 (94367) | 94367..95011 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QQA26_RS24520 (95098) | 95098..95406 | + | 309 | WP_000048808.1 | hypothetical protein | - |
| QQA26_RS24525 (95820) | 95820..96800 | + | 981 | WP_045133365.1 | plasmid segregation protein ParM | - |
| QQA26_RS24530 (96793) | 96793..97209 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QQA26_RS24535 (97211) | 97211..98485 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| QQA26_RS24540 (98485) | 98485..98922 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QQA26_RS24545 (98919) | 98919..99167 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QQA26_RS24550 (99585) | 99585..100487 | + | 903 | WP_077872020.1 | DUF1281 domain-containing protein | - |
| QQA26_RS24555 (100484) | 100484..100795 | + | 312 | WP_032143956.1 | hypothetical protein | - |
| QQA26_RS24560 (100871) | 100871..101554 | + | 684 | WP_045133339.1 | DNA methylase | - |
| QQA26_RS24565 (101555) | 101555..101776 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| QQA26_RS24570 (101757) | 101757..102224 | + | 468 | WP_223230041.1 | DUF1380 family protein | - |
| QQA26_RS24575 (102269) | 102269..103039 | + | 771 | WP_045133340.1 | hypothetical protein | - |
| QQA26_RS24580 (103457) | 103457..103882 | + | 426 | WP_001198908.1 | antirestriction protein | - |
| QQA26_RS24585 (103929) | 103929..104351 | + | 423 | WP_045133341.1 | DUF1380 family protein | - |
| QQA26_RS24590 (104348) | 104348..104539 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QQA26_RS24595 (105309) | 105309..105836 | + | 528 | WP_001276121.1 | single-stranded DNA-binding protein | - |
| QQA26_RS24600 (105893) | 105893..106126 | + | 234 | WP_001042948.1 | DUF905 domain-containing protein | - |
| QQA26_RS24605 (106188) | 106188..108146 | + | 1959 | WP_289266620.1 | ParB/RepB/Spo0J family partition protein | - |
| QQA26_RS24610 (108201) | 108201..108635 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QQA26_RS24615 (108632) | 108632..109351 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QQA26_RS24620 (109348) | 109348..109944 | + | 597 | WP_000978012.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|