MGE detailed information
MGE type: Genomic_island MGE length: 9357 bp
Accession: NZ_CP126343 Location: 4240537..4249893 Organism: Escherichia coli strain DAX4 Replicon: chromosome
Accession: NZ_CP126343 Location: 4240537..4249893 Organism: Escherichia coli strain DAX4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN220_RS20425 (4235698) | 4235698..4236999 | + | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
| QN220_RS20430 (4237115) | 4237115..4237453 | + | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| QN220_RS20435 (4237429) | 4237429..4239126 | + | 1698 | WP_000068928.1 | protein-disulfide reductase DsbD | - |
| QN220_RS20440 (4239163) | 4239163..4239738 | + | 576 | WP_001188520.1 | transcriptional regulator | - |
| QN220_RS20450 (4240537) | 4240537..4242075 | + | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QN220_RS20455 (4242441) | 4242441..4243775 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QN220_RS20460 (4243855) | 4243855..4246002 | + | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| QN220_RS20465 (4246061) | 4246061..4247518 | + | 1458 | WP_000856829.1 | dipeptide/tripeptide permease DtpC | - |
| QN220_RS20470 (4247755) | 4247755..4249272 | + | 1518 | WP_284562122.1 | lysine--tRNA ligase | - |
| QN220_RS20475 (4249396) | 4249396..4249569 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QN220_RS20480 (4249597) | 4249597..4249893 | - | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QN220_RS20485 (4250120) | 4250120..4250392 | - | 273 | WP_000405651.1 | GNAT family N-acetyltransferase | - |
| QN220_RS20490 (4250404) | 4250404..4250634 | - | 231 | WP_000371704.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QN220_RS20495 (4250815) | 4250815..4252446 | + | 1632 | WP_153443403.1 | sensor histidine kinase | - |
| QN220_RS20500 (4252443) | 4252443..4253162 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.005 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.005 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.005 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.005 |