MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 59549 bp
Accession: NZ_CP126331 Location: 1..59549 Organism: Citrobacter braakii strain THB2 Replicon: plasmid pTHB
Accession: NZ_CP126331 Location: 1..59549 Organism: Citrobacter braakii strain THB2 Replicon: plasmid pTHB
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN090_RS23200 (QN090_23200) | 629..1527 | + | 899 | Protein_1 | P-type conjugative transfer protein VirB9 | - |
| QN090_RS23205 (QN090_23205) | 1524..2797 | + | 1274 | Protein_2 | hypothetical protein | VF |
| QN090_RS23210 (QN090_23210) | 2804..3835 | + | 1032 | WP_115105234.1 | Type IV secretion system protein VirB11 | VF |
| QN090_RS23215 (QN090_23215) | 3929..4225 | + | 297 | WP_284564815.1 | cag pathogenicity island Cag12 family protein | - |
| QN090_RS23220 (QN090_23220) | 4256..4561 | + | 306 | WP_115105195.1 | conjugal transfer protein | - |
| QN090_RS23225 (QN090_23225) | 4564..4872 | + | 309 | WP_284564817.1 | hypothetical protein | - |
| QN090_RS23230 (QN090_23230) | 4879..7076 | + | 2198 | Protein_7 | DNA topoisomerase 3 | - |
| QN090_RS23235 (QN090_23235) | 7073..7471 | + | 399 | WP_181213163.1 | H-NS family nucleoid-associated regulatory protein | - |
| QN090_RS23240 (QN090_23240) | 8214..10112 | + | 1899 | WP_284564818.1 | type IV secretion system DNA-binding domain-containing protein | - |
| QN090_RS23245 (QN090_23245) | 10122..10868 | + | 747 | WP_284564819.1 | hypothetical protein | Relaxase |
| QN090_RS23250 (QN090_23250) | 10861..11388 | + | 528 | WP_284564820.1 | hypothetical protein | VF |
| QN090_RS23255 (QN090_23255) | 11572..12534 | - | 963 | WP_284564821.1 | zincin-like metallopeptidase domain-containing protein | - |
| QN090_RS23260 (QN090_23260) | 12844..13680 | - | 837 | WP_284564822.1 | DUF6430 domain-containing protein | - |
| QN090_RS23265 (QN090_23265) | 13728..14282 | - | 555 | WP_284564828.1 | hypothetical protein | - |
| QN090_RS23270 (QN090_23270) | 14330..14980 | - | 651 | WP_115105212.1 | YkgJ family cysteine cluster protein | - |
| QN090_RS23275 (QN090_23275) | 15472..16443 | + | 972 | WP_209634227.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QN090_RS23280 (QN090_23280) | 16534..17225 | + | 692 | WP_284564831.1 | IS1 family transposase ISYps7 | Transposase |
| QN090_RS23285 (QN090_23285) | 17362..17745 | - | 384 | WP_284564829.1 | hypothetical protein | - |
| QN090_RS23290 (QN090_23290) | 17998..18617 | + | 620 | Protein_19 | ParA family partition ATPase | - |
| QN090_RS23295 (QN090_23295) | 18657..18884 | + | 228 | WP_008815937.1 | plasmid partition protein ParG | - |
| QN090_RS23300 (QN090_23300) | 19015..19299 | - | 285 | WP_032490867.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QN090_RS23305 (QN090_23305) | 19292..19534 | - | 243 | WP_050074632.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| QN090_RS23310 (QN090_23310) | 20106..21023 | - | 918 | WP_149465089.1 | plasmid replication initiator RepA | - |
| QN090_RS23315 (QN090_23315) | 21528..21893 | - | 366 | WP_181213168.1 | helix-turn-helix transcriptional regulator | - |
| QN090_RS23320 (QN090_23320) | 22232..22600 | + | 369 | WP_032677090.1 | hypothetical protein | - |
| QN090_RS23325 (QN090_23325) | 22883..23338 | + | 456 | WP_181213167.1 | transcription termination/antitermination NusG family protein | - |
| QN090_RS23330 (QN090_23330) | 23403..23627 | + | 225 | WP_115105220.1 | hypothetical protein | - |
| QN090_RS23335 (QN090_23335) | 23680..24354 | + | 675 | WP_181213166.1 | hypothetical protein | VF |
| QN090_RS23340 (QN090_23340) | 24420..24653 | + | 234 | WP_249415269.1 | hypothetical protein | VF |
| QN090_RS23345 (QN090_23345) | 24668..27418 | + | 2751 | WP_115105224.1 | Type IV secretion system protein virB4 | VF |
| QN090_RS23350 (QN090_23350) | 27465..28190 | + | 726 | WP_284564825.1 | type IV secretion system protein | - |
| QN090_RS23355 (QN090_23355) | 28201..28455 | + | 255 | WP_284564830.1 | EexN family lipoprotein | - |
| QN090_RS23360 (QN090_23360) | 28489..29508 | + | 1020 | WP_284564827.1 | type IV secretion system protein | - |
| QN090_RS23365 (QN090_23365) | 29726..30409 | + | 684 | WP_115105229.1 | Type IV secretion system protein virB8 | VF |
| QN090_RS23370 (QN090_23370) | 30409..31307 | + | 899 | Protein_35 | P-type conjugative transfer protein VirB9 | - |
| QN090_RS23375 (QN090_23375) | 31304..32578 | + | 1275 | WP_284564814.1 | hypothetical protein | VF |
| QN090_RS23380 (QN090_23380) | 32585..33615 | + | 1031 | Protein_37 | Type IV secretion system protein VirB11 | VF |
| QN090_RS23385 (QN090_23385) | 33710..34006 | + | 297 | WP_284564815.1 | cag pathogenicity island Cag12 family protein | - |
| QN090_RS23390 (QN090_23390) | 34037..34354 | + | 318 | WP_284564816.1 | conjugal transfer protein | - |
| QN090_RS23395 (QN090_23395) | 34344..34652 | + | 309 | WP_284564817.1 | hypothetical protein | - |
| QN090_RS23400 (QN090_23400) | 34659..36858 | + | 2200 | Protein_41 | DNA topoisomerase 3 | - |
| QN090_RS23405 (QN090_23405) | 36855..37253 | + | 399 | WP_181213163.1 | H-NS family nucleoid-associated regulatory protein | - |
| QN090_RS23410 (QN090_23410) | 38000..39898 | + | 1899 | WP_284564818.1 | type IV secretion system DNA-binding domain-containing protein | - |
| QN090_RS23415 (QN090_23415) | 39908..40654 | + | 747 | WP_284564819.1 | hypothetical protein | Relaxase |
| QN090_RS23420 (QN090_23420) | 40647..41174 | + | 528 | WP_284564820.1 | hypothetical protein | VF |
| QN090_RS23425 (QN090_23425) | 41361..42323 | - | 963 | WP_284564821.1 | zincin-like metallopeptidase domain-containing protein | - |
| QN090_RS23430 (QN090_23430) | 42634..43470 | - | 837 | WP_284564822.1 | DUF6430 domain-containing protein | - |
| QN090_RS23435 (QN090_23435) | 43518..44071 | - | 554 | Protein_48 | hypothetical protein | - |
| QN090_RS23440 (QN090_23440) | 44094..44693 | - | 600 | WP_284564823.1 | YkgJ family cysteine cluster protein | - |
| QN090_RS23445 (QN090_23445) | 45259..46230 | + | 972 | WP_209634227.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QN090_RS23450 (QN090_23450) | 46321..47012 | + | 692 | WP_284564831.1 | IS1 family transposase ISYps7 | Transposase |
| QN090_RS23455 (QN090_23455) | 47009..47533 | - | 525 | WP_008815939.1 | hypothetical protein | - |
| QN090_RS23460 (QN090_23460) | 47786..48405 | + | 620 | Protein_53 | ParA family partition ATPase | - |
| QN090_RS23465 (QN090_23465) | 48445..48672 | + | 228 | WP_008815937.1 | plasmid partition protein ParG | - |
| QN090_RS23470 (QN090_23470) | 48803..49087 | - | 285 | WP_032490867.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QN090_RS23475 (QN090_23475) | 49080..49322 | - | 243 | WP_050074632.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| QN090_RS23480 (QN090_23480) | 49894..50811 | - | 918 | WP_149465089.1 | plasmid replication initiator RepA | - |
| QN090_RS23485 (QN090_23485) | 51319..51684 | - | 366 | WP_181213168.1 | helix-turn-helix transcriptional regulator | - |
| QN090_RS23490 (QN090_23490) | 52023..52391 | + | 369 | WP_032677090.1 | hypothetical protein | - |
| QN090_RS23495 (QN090_23495) | 52674..53129 | + | 456 | WP_181213167.1 | transcription termination/antitermination NusG family protein | - |
| QN090_RS23500 (QN090_23500) | 53194..53415 | + | 222 | WP_284564824.1 | hypothetical protein | - |
| QN090_RS23505 (QN090_23505) | 53473..54123 | + | 651 | WP_284564832.1 | hypothetical protein | VF |
| QN090_RS23510 (QN090_23510) | 54189..54422 | + | 234 | WP_249415269.1 | hypothetical protein | VF |
| QN090_RS23515 (QN090_23515) | 54437..57187 | + | 2751 | WP_115105224.1 | Type IV secretion system protein virB4 | VF |
| QN090_RS23520 (QN090_23520) | 57234..57959 | + | 726 | WP_284564825.1 | type IV secretion system protein | - |
| QN090_RS23525 (QN090_23525) | 57970..58248 | + | 279 | WP_284564826.1 | EexN family lipoprotein | - |
| QN090_RS23530 (QN090_23530) | 58259..59278 | + | 1020 | WP_284564827.1 | type IV secretion system protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|