MGE detailed information
MGE type: Genomic_island MGE length: 11356 bp
Accession: NZ_CP126166 Location: 2456605..2467960 Organism: Salmonella enterica subsp. enterica strain CRSE-01 Replicon: chromosome
Accession: NZ_CP126166 Location: 2456605..2467960 Organism: Salmonella enterica subsp. enterica strain CRSE-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NED09_RS11770 (2452051) | 2452051..2453149 | + | 1099 | WP_096059418.1 | peptide chain release factor 2 | - |
| NED09_RS11775 (2453159) | 2453159..2454676 | + | 1518 | WP_000003339.1 | lysine--tRNA ligase | - |
| NED09_RS11780 (2454752) | 2454752..2455297 | - | 546 | WP_000133994.1 | isopentenyl-diphosphate Delta-isomerase | - |
| NED09_RS11785 (2455562) | 2455562..2456320 | + | 759 | WP_000244328.1 | amidase activator ActS | - |
| NED09_RS11795 (2456605) | 2456605..2457411 | - | 807 | WP_001574939.1 | DUF1460 domain-containing protein | - |
| NED09_RS11800 (2457691) | 2457691..2457942 | - | 252 | WP_001576352.1 | hypothetical protein | - |
| NED09_RS11805 (2458151) | 2458151..2458378 | + | 228 | WP_000557549.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| NED09_RS11810 (2458378) | 2458378..2458776 | + | 399 | WP_000911336.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| NED09_RS11815 (2459584) | 2459584..2460120 | + | 537 | WP_001038502.1 | Attachment invasion locus protein | VF |
| NED09_RS11820 (2460167) | 2460167..2460799 | + | 633 | WP_000835265.1 | YfdX family protein | - |
| NED09_RS11825 (2461518) | 2461518..2462099 | + | 582 | WP_001244651.1 | putative fimbrial-like protein YbgD | VF |
| NED09_RS11830 (2462219) | 2462219..2464702 | + | 2484 | WP_000705505.1 | Outer membrane usher protein PapC | VF |
| NED09_RS11835 (2464743) | 2464743..2465486 | + | 744 | WP_000798504.1 | Chaperone protein PapD | VF |
| NED09_RS11840 (2465483) | 2465483..2466559 | + | 1077 | WP_000141330.1 | hypothetical protein | - |
| NED09_RS11845 (2466703) | 2466703..2467215 | + | 513 | WP_000336257.1 | CaiF/GrlA family transcriptional regulator | - |
| NED09_RS11850 (2467202) | 2467202..2467960 | + | 759 | WP_000134802.1 | transcriptional regulator | - |
| NED09_RS11855 (2468170) | 2468170..2469012 | - | 843 | WP_000503690.1 | nickel/cobalt efflux protein RcnA | - |
| NED09_RS11860 (2469134) | 2469134..2469406 | + | 273 | WP_000019953.1 | Ni(II)/Co(II)-binding transcriptional repressor RcnR | - |
| NED09_RS11865 (2469437) | 2469437..2470666 | - | 1230 | WP_000036838.1 | amino acid permease | - |
| NED09_RS11870 (2470808) | 2470808..2471263 | - | 456 | WP_001519547.1 | multidrug/biocide efflux PACE transporter | - |
| NED09_RS11875 (2471367) | 2471367..2472230 | + | 864 | WP_001270774.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA297244 | UFRD01000002 | 4451871..4463194 | 0.009 |