MGE detailed information
MGE type: Genomic_island MGE length: 10427 bp
Accession: NZ_CP126138 Location: 995356..1005782 Organism: Salmonella enterica subsp. enterica serovar Kottbus strain DSK01 Replicon: chromosome
Accession: NZ_CP126138 Location: 995356..1005782 Organism: Salmonella enterica subsp. enterica serovar Kottbus strain DSK01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QNM33_RS04745 (990469) | 990469..990849 | + | 381 | WP_001070479.1 | DUF4440 domain-containing protein | - |
| QNM33_RS04750 (990905) | 990905..993472 | - | 2568 | WP_001005807.1 | DNA mismatch repair protein MutS | - |
| QNM33_RS04755 (993631) | 993631..994152 | + | 522 | WP_000858988.1 | hypothetical protein | - |
| QNM33_RS04760 (994324) | 994324..994980 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| QNM33_RS04765 (995327) | 995327..995532 | + | 206 | Protein_934 | IS5 family transposase ISEcl3 | Transposase |
| QNM33_RS04770 (995605) | 995605..996132 | - | 528 | WP_000971655.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QNM33_RS04775 (996129) | 996129..996419 | - | 291 | WP_000855692.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QNM33_RS04780 (996689) | 996689..996867 | - | 179 | Protein_937 | IS3 family transposase | - |
| QNM33_RS04785 (997108) | 997108..997434 | + | 327 | WP_000393302.1 | hypothetical protein | - |
| QNM33_RS04790 (997707) | 997707..998054 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| QNM33_RS04795 (998039) | 998039..998488 | - | 450 | WP_000381610.1 | membrane protein | - |
| QNM33_RS04800 (998919) | 998919..999362 | - | 444 | WP_000715092.1 | Type 3 secretion system pilotin | VF |
| QNM33_RS04805 (999819) | 999819..1000469 | + | 651 | WP_001674874.1 | Invasion protein InvF | VF |
| QNM33_RS04810 (1000466) | 1000466..1002154 | + | 1689 | WP_000848113.1 | Type 3 secretion system secretin | VF |
| QNM33_RS04815 (1002151) | 1002151..1003269 | + | 1119 | WP_080247882.1 | Protein MxiC | VF |
| QNM33_RS04820 (1003294) | 1003294..1005351 | + | 2058 | WP_000927219.1 | Invasion protein InvA | VF |
| QNM33_RS04825 (1005375) | 1005375..1005782 | + | 408 | WP_001164066.1 | Surface presentation of antigens protein SpaK | VF |
| QNM33_RS04830 (1005779) | 1005779..1007074 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| QNM33_RS04835 (1007052) | 1007052..1007495 | + | 444 | WP_001520714.1 | SPI-1 type III secretion system protein SpaM | - |
| QNM33_RS04840 (1007495) | 1007495..1008505 | + | 1011 | WP_000503098.1 | SPI-1 type III secretion system protein SpaN | - |
| QNM33_RS04845 (1008505) | 1008505..1009416 | + | 912 | WP_000058734.1 | SPI-1 type III secretion system protein SpaO | - |
| QNM33_RS04850 (1009406) | 1009406..1010080 | + | 675 | WP_000526016.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| QNM33_RS04855 (1010106) | 1010106..1010366 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0 |