MGE detailed information
MGE type: Prophage MGE length: 71324 bp
Accession: NZ_CP125903 Location: 1590431..1661754 Organism: Staphylococcus aureus strain CHAL1 Replicon: chromosome
Accession: NZ_CP125903 Location: 1590431..1661754 Organism: Staphylococcus aureus strain CHAL1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QM337_RS07590 (1585862) | 1585862..1586815 | - | 954 | WP_001163814.1 | helix-turn-helix domain-containing protein | - |
| QM337_RS07595 (1586923) | 1586923..1587171 | + | 249 | WP_001151997.1 | ferredoxin | - |
| QM337_RS07600 (1587277) | 1587277..1587822 | - | 546 | WP_001186908.1 | ECF transporter S component | - |
| QM337_RS07605 (1588101) | 1588101..1588265 | - | 165 | WP_001799520.1 | hypothetical protein | - |
| QM337_RS07610 (1588470) | 1588470..1589378 | - | 909 | WP_000476878.1 | DUF1672 domain-containing protein | - |
| QM337_RS07615 (1589436) | 1589436..1590341 | - | 906 | WP_000913238.1 | DUF1672 domain-containing protein | - |
| QM337_RS07620 (1590431) | 1590431..1590646 | - | 216 | WP_000209712.1 | hypothetical protein | - |
| QM337_RS07625 (1591368) | 1591368..1592822 | - | 1455 | WP_000909205.1 | N-acetylmuramoyl-L-alanine amidase | - |
| QM337_RS07630 (1592833) | 1592833..1593135 | - | 303 | WP_000339141.1 | phage holin | - |
| QM337_RS07635 (1593271) | 1593271..1593570 | - | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| QM337_RS07640 (1593616) | 1593616..1593780 | - | 165 | WP_000916020.1 | XkdX family protein | - |
| QM337_RS07645 (1593773) | 1593773..1594162 | - | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| QM337_RS07650 (1594162) | 1594162..1595628 | - | 1467 | WP_000067132.1 | BppU family phage baseplate upper protein | - |
| QM337_RS07655 (1595628) | 1595628..1597538 | - | 1911 | WP_000429558.1 | minor structural protein | - |
| QM337_RS07660 (1597554) | 1597554..1597844 | - | 291 | WP_000179858.1 | hypothetical protein | - |
| QM337_RS07665 (1597844) | 1597844..1599427 | - | 1584 | WP_000384474.1 | prophage endopeptidase tail family protein | - |
| QM337_RS07670 (1599436) | 1599436..1600260 | - | 825 | WP_001190533.1 | phage tail family protein | - |
| QM337_RS07675 (1600260) | 1600260..1606460 | - | 6201 | WP_001003420.1 | phage tail tape measure protein | - |
| QM337_RS07680 (1606474) | 1606474..1606632 | - | 159 | WP_000438833.1 | hypothetical protein | - |
| QM337_RS07685 (1606674) | 1606674..1607024 | - | 351 | WP_000589167.1 | hypothetical protein | - |
| QM337_RS07690 (1607082) | 1607082..1607537 | - | 456 | WP_000169127.1 | Ig-like domain-containing protein | - |
| QM337_RS07695 (1607629) | 1607629..1608270 | - | 642 | WP_000807536.1 | phage tail protein | - |
| QM337_RS07700 (1608305) | 1608305..1608700 | - | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| QM337_RS07705 (1608701) | 1608701..1609102 | - | 402 | WP_000110023.1 | hypothetical protein | - |
| QM337_RS07710 (1609099) | 1609099..1609431 | - | 333 | WP_000395502.1 | hypothetical protein | - |
| QM337_RS07715 (1609443) | 1609443..1609721 | - | 279 | WP_000050973.1 | head-tail connector protein | - |
| QM337_RS07720 (1609790) | 1609790..1610953 | - | 1164 | WP_001142734.1 | phage major capsid protein | - |
| QM337_RS07725 (1610965) | 1610965..1611738 | - | 774 | WP_000061866.1 | Clp protease ClpP | - |
| QM337_RS07730 (1611722) | 1611722..1612960 | - | 1239 | WP_001100670.1 | phage portal protein | - |
| QM337_RS07735 (1612965) | 1612965..1614656 | - | 1692 | WP_000153541.1 | terminase large subunit | - |
| QM337_RS07740 (1614646) | 1614646..1614951 | - | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| QM337_RS07745 (1615080) | 1615080..1615394 | - | 315 | WP_000160689.1 | HNH endonuclease | - |
| QM337_RS07750 (1615551) | 1615551..1615988 | - | 438 | WP_000528514.1 | transcriptional regulator | - |
| QM337_RS07755 (1616001) | 1616001..1617368 | - | 1368 | WP_001793488.1 | DEAD/DEAH box helicase | - |
| QM337_RS07760 (1617349) | 1617349..1617639 | - | 291 | WP_000665205.1 | VRR-NUC domain-containing protein | - |
| QM337_RS07765 (1617773) | 1617773..1617877 | + | 105 | WP_015978074.1 | hypothetical protein | - |
| QM337_RS07770 (1617980) | 1617980..1620427 | - | 2448 | WP_283531377.1 | virulence-associated E family protein | - |
| QM337_RS07775 (1620480) | 1620480..1620680 | - | 201 | WP_000265258.1 | DUF1514 family protein | - |
| QM337_RS07780 (1620748) | 1620748..1620900 | - | 153 | WP_000595237.1 | transcriptional activator RinB | - |
| QM337_RS07785 (1620893) | 1620893..1621129 | - | 237 | WP_000483477.1 | hypothetical protein | - |
| QM337_RS07790 (1621154) | 1621154..1621390 | - | 237 | WP_000195806.1 | DUF1381 domain-containing protein | - |
| QM337_RS07795 (1621427) | 1621427..1621963 | - | 537 | WP_000185703.1 | dUTPase | - |
| QM337_RS07800 (1621956) | 1621956..1622138 | - | 183 | WP_000028425.1 | hypothetical protein | Antitoxin Detail |
| QM337_RS07805 (1622128) | 1622128..1622379 | - | 252 | WP_001065110.1 | DUF1024 family protein | Toxin Detail |
| QM337_RS07810 (1622394) | 1622394..1622636 | - | 243 | WP_000132193.1 | SAV1978 family virulence-associated passenger protein | - |
| QM337_RS07815 (1622651) | 1622651..1622851 | - | 201 | WP_000235324.1 | hypothetical protein | - |
| QM337_RS07820 (1622854) | 1622854..1623111 | - | 258 | WP_000022730.1 | DUF3310 domain-containing protein | - |
| QM337_RS07825 (1623111) | 1623111..1623512 | - | 402 | WP_000113974.1 | PVL family protein | - |
| QM337_RS07830 (1623512) | 1623512..1623697 | - | 186 | WP_001164629.1 | DUF3113 family protein | - |
| QM337_RS07835 (1623710) | 1623710..1625662 | - | 1953 | WP_001802096.1 | DNA polymerase | - |
| QM337_RS07840 (1625730) | 1625730..1626287 | - | 558 | WP_000645048.1 | DUF2815 family protein | - |
| QM337_RS07845 (1626313) | 1626313..1627479 | - | 1167 | WP_000762530.1 | DUF2800 domain-containing protein | - |
| QM337_RS07850 (1627476) | 1627476..1627838 | - | 363 | WP_000985972.1 | hypothetical protein | - |
| QM337_RS07855 (1627853) | 1627853..1628176 | - | 324 | WP_000174998.1 | hypothetical protein | - |
| QM337_RS07860 (1628255) | 1628255..1628416 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
| QM337_RS07865 (1628429) | 1628429..1628692 | - | 264 | WP_001124157.1 | helix-turn-helix domain-containing protein | - |
| QM337_RS07870 (1628717) | 1628717..1628932 | - | 216 | WP_001097552.1 | hypothetical protein | - |
| QM337_RS07875 (1628987) | 1628987..1629352 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| QM337_RS07880 (1629321) | 1629321..1629566 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| QM337_RS07885 (1629616) | 1629616..1629834 | - | 219 | WP_001001383.1 | hypothetical protein | - |
| QM337_RS07890 (1629850) | 1629850..1630405 | - | 556 | Protein_1549 | phage antirepressor KilAC domain-containing protein | - |
| QM337_RS07895 (1630431) | 1630431..1630658 | - | 228 | WP_001030311.1 | hypothetical protein | - |
| QM337_RS07900 (1630830) | 1630830..1631444 | + | 615 | WP_000801423.1 | XRE family transcriptional regulator | - |
| QM337_RS07905 (1631460) | 1631460..1632380 | + | 921 | WP_000348133.1 | exonuclease domain-containing protein | - |
| QM337_RS07910 (1632476) | 1632476..1632658 | + | 183 | WP_000705240.1 | hypothetical protein | - |
| QM337_RS07915 (1632695) | 1632695..1632841 | + | 147 | WP_001795334.1 | hypothetical protein | - |
| QM337_RS07920 (1632838) | 1632838..1633452 | - | 615 | WP_000191466.1 | hypothetical protein | - |
| QM337_RS07925 (1633578) | 1633578..1634783 | + | 1206 | WP_000264751.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QM337_RS07930 (1634826) | 1634826..1636868 | - | 2043 | WP_001794062.1 | hypothetical protein | - |
| QM337_RS07935 (1636855) | 1636855..1637787 | - | 933 | WP_001574168.1 | DUF1672 domain-containing protein | - |
| QM337_RS07940 (1638039) | 1638039..1639790 | - | 1752 | WP_000987777.1 | two-component system sensor histidine kinase SrrB | - |
| QM337_RS07945 (1639771) | 1639771..1640496 | - | 726 | WP_000064078.1 | Transcriptional regulatory protein SrrA | VF |
| QM337_RS07950 (1640629) | 1640629..1641366 | - | 738 | WP_000159577.1 | pseudouridine synthase | - |
| QM337_RS07955 (1641359) | 1641359..1641901 | - | 543 | WP_000368652.1 | SMC-Scp complex subunit ScpB | - |
| QM337_RS07960 (1641894) | 1641894..1642625 | - | 732 | WP_000273367.1 | segregation/condensation protein A | - |
| QM337_RS07965 (1642717) | 1642717..1643223 | + | 507 | WP_001183424.1 | DUF309 domain-containing protein | - |
| QM337_RS07970 (1643301) | 1643301..1644188 | - | 888 | WP_000447733.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| QM337_RS07975 (1644237) | 1644237..1644686 | - | 450 | WP_000392691.1 | Fur family transcriptional regulator | - |
| QM337_RS07980 (1644791) | 1644791..1645333 | - | 543 | WP_000365236.1 | NUDIX hydrolase | - |
| QM337_RS07985 (1645415) | 1645415..1646323 | + | 909 | WP_001171333.1 | aldo/keto reductase | - |
| QM337_RS07990 (1646539) | 1646539..1646787 | - | 249 | WP_000995806.1 | hypothetical protein | - |
| QM337_RS07995 (1646803) | 1646803..1647558 | - | 756 | WP_000678227.1 | SDR family oxidoreductase | - |
| QM337_RS08000 (1647700) | 1647700..1648515 | + | 816 | WP_000779748.1 | pyrroline-5-carboxylate reductase | - |
| QM337_RS08005 (1648620) | 1648620..1649540 | - | 921 | WP_000454059.1 | ribonuclease Z | - |
| QM337_RS08010 (1649853) | 1649853..1651337 | + | 1485 | WP_000105070.1 | glucose-6-phosphate dehydrogenase | - |
| QM337_RS08015 (1651567) | 1651567..1652433 | + | 867 | WP_000382585.1 | AraC family transcriptional regulator | - |
| QM337_RS08020 (1652516) | 1652516..1654165 | - | 1650 | WP_283531416.1 | alpha-glucosidase | - |
| QM337_RS08025 (1654181) | 1654181..1655200 | - | 1020 | WP_000256335.1 | HTH-type transcriptional regulator MalR | VF |
| QM337_RS08030 (1655201) | 1655201..1655455 | - | 255 | WP_001791204.1 | hypothetical protein | - |
| QM337_RS08035 (1655394) | 1655394..1655765 | - | 372 | WP_000413432.1 | VOC family protein | - |
| QM337_RS08040 (1656009) | 1656009..1656170 | + | 162 | Protein_1579 | ISL3 family transposase | - |
| QM337_RS08045 (1656242) | 1656242..1657141 | - | 900 | WP_000798481.1 | carbohydrate kinase family protein | - |
| QM337_RS08050 (1657156) | 1657156..1658142 | - | 987 | WP_025175595.1 | MFS transporter | - |
| QM337_RS08060 (1659794) | 1659794..1660032 | - | 239 | Protein_1583 | MFS transporter | - |
| QM337_RS08065 (1660348) | 1660348..1661754 | - | 1407 | WP_000193707.1 | 6-phosphogluconate dehydrogenase, decarboxylating | VF |
| QM337_RS08070 (1661822) | 1661822..1662955 | - | 1134 | WP_000606703.1 | tripeptidase T | - |
| QM337_RS08075 (1663218) | 1663218..1663397 | + | 180 | WP_001794325.1 | stressosome-associated protein Prli42 | - |
| QM337_RS08080 (1663524) | 1663524..1664504 | - | 981 | WP_000916193.1 | aromatic acid exporter family protein | - |
| QM337_RS08085 (1664518) | 1664518..1664955 | - | 438 | WP_000367420.1 | bacilliredoxin BrxB | - |
| QM337_RS08090 (1665305) | 1665305..1666579 | - | 1275 | WP_000406855.1 | dihydrolipoamide acetyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|