MGE detailed information
MGE type: Mobilizable plasmid MGE length: 88152 bp
Accession: NZ_CP124496 Location: 1..88152 Organism: Escherichia coli strain AVS0662 Replicon: plasmid pAVS0662-A
Accession: NZ_CP124496 Location: 1..88152 Organism: Escherichia coli strain AVS0662 Replicon: plasmid pAVS0662-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP57_RS24005 (1) | 1..978 | + | 978 | WP_033550836.1 | RepB family plasmid replication initiator protein | - |
| QJP57_RS24010 (1263) | 1263..2003 | - | 741 | WP_033550837.1 | tyrosine-type recombinase/integrase | - |
| QJP57_RS24015 (2124) | 2124..2313 | - | 190 | Protein_2 | serine/threonine protein kinase | - |
| QJP57_RS24020 (2680) | 2680..3849 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| QJP57_RS24025 (4075) | 4075..4250 | - | 176 | Protein_4 | IS3 family transposase | - |
| QJP57_RS24030 (4696) | 4696..4968 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| QJP57_RS24035 (5505) | 5505..5929 | - | 425 | Protein_6 | IS3 family transposase IS2 | Transposase |
| QJP57_RS24040 (6211) | 6211..8181 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| QJP57_RS24045 (8188) | 8188..8979 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| QJP57_RS24050 (9071) | 9071..9496 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP57_RS24055 (9493) | 9493..9842 | + | 350 | Protein_10 | IS66 family transposase ISEc23 | Transposase |
| QJP57_RS24060 (9873) | 9873..11486 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP57_RS24065 (11581) | 11581..12189 | - | 609 | Protein_12 | IS66 family transposase ISEc22 | Transposase |
| QJP57_RS24070 (12257) | 12257..13037 | - | 781 | Protein_13 | IS21-like element IS100kyp family helper ATPase IstB | - |
| QJP57_RS24075 (13034) | 13034..14055 | - | 1022 | Protein_14 | IS21 family transposase IS100kyp | Transposase |
| QJP57_RS24080 (14140) | 14140..15085 | - | 946 | Protein_15 | IS66 family transposase ISEc8 | Transposase |
| QJP57_RS24085 (15134) | 15134..15481 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| QJP57_RS24090 (15478) | 15478..15882 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| QJP57_RS24095 (15962) | 15962..16300 | - | 339 | Protein_18 | IS3 family transposase IS629 | Transposase |
| QJP57_RS24100 (16384) | 16384..17892 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| QJP57_RS24105 (18565) | 18565..19304 | - | 740 | Protein_20 | IS3 family transposase IS629 | Transposase |
| QJP57_RS24110 (19330) | 19330..19635 | + | 306 | Protein_21 | IS91 family transposase ISSbo1 | Transposase |
| QJP57_RS24115 (20158) | 20158..21333 | - | 1176 | WP_001020413.1 | putative protein YncE | VF |
| QJP57_RS24120 (21402) | 21402..23663 | - | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| QJP57_RS24125 (23832) | 23832..24608 | - | 777 | WP_000981091.1 | energy transducer TonB | - |
| QJP57_RS24130 (24616) | 24616..25491 | - | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| QJP57_RS24135 (25865) | 25865..26490 | - | 626 | Protein_26 | replication initiation protein | - |
| QJP57_RS24140 (27943) | 27943..28278 | - | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| QJP57_RS24145 (28407) | 28407..28754 | + | 348 | WP_000142452.1 | DUF6404 family protein | - |
| QJP57_RS24150 (28774) | 28774..29283 | - | 510 | WP_000194542.1 | hypothetical protein | - |
| QJP57_RS24155 (29280) | 29280..29540 | - | 261 | WP_000371882.1 | hypothetical protein | - |
| QJP57_RS24160 (29642) | 29642..30381 | + | 740 | Protein_31 | IS3 family transposase IS629 | Transposase |
| QJP57_RS24165 (31054) | 31054..31368 | + | 315 | Protein_32 | IS5 family transposase ISKpn26 | Transposase |
| QJP57_RS24170 (31369) | 31369..31542 | + | 174 | Protein_33 | IS5 family transposase ISKpn26 | Transposase |
| QJP57_RS24175 (31692) | 31692..32325 | - | 634 | Protein_34 | histidine-type phosphatase | - |
| QJP57_RS24180 (32447) | 32447..32932 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| QJP57_RS24185 (32957) | 32957..33442 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| QJP57_RS24190 (33429) | 33429..34124 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| QJP57_RS24195 (34129) | 34129..35259 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| QJP57_RS24200 (35249) | 35249..36532 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| QJP57_RS24205 (36535) | 36535..37914 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| QJP57_RS24210 (38018) | 38018..38545 | - | 528 | WP_000178050.1 | iron transporter | - |
| QJP57_RS24215 (38586) | 38586..40472 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJP57_RS24220 (40819) | 40819..41580 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJP57_RS24225 (41817) | 41817..42323 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJP57_RS24230 (42313) | 42313..42483 | - | 171 | Protein_45 | DsbA family protein | - |
| QJP57_RS24235 (42621) | 42621..43325 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QJP57_RS24240 (43390) | 43390..43656 | - | 267 | Protein_47 | TraC family protein | - |
| QJP57_RS24245 (43816) | 43816..44037 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| QJP57_RS24250 (44172) | 44172..44687 | - | 516 | WP_000809886.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QJP57_RS24255 (44687) | 44687..44998 | - | 312 | WP_001057272.1 | conjugal transfer protein TrbD | - |
| QJP57_RS24260 (44985) | 44985..45551 | - | 567 | WP_000896601.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QJP57_RS24265 (45541) | 45541..46992 | - | 1452 | WP_283184683.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QJP57_RS24270 (46992) | 46992..47720 | - | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| QJP57_RS24275 (47707) | 47707..48273 | - | 567 | WP_042960710.1 | type IV conjugative transfer system protein TraE | - |
| QJP57_RS24280 (48295) | 48295..48606 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| QJP57_RS24285 (48621) | 48621..48980 | - | 360 | WP_024210418.1 | type IV conjugative transfer system pilin TraA | - |
| QJP57_RS24290 (49014) | 49014..49241 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| QJP57_RS24295 (49329) | 49329..50006 | - | 678 | WP_001348626.1 | PAS domain-containing protein | - |
| QJP57_RS24300 (50140) | 50140..50523 | - | 384 | WP_001151566.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJP57_RS24305 (50865) | 50865..51455 | + | 591 | WP_001376243.1 | hypothetical protein | VF |
| QJP57_RS24310 (51752) | 51752..52573 | - | 822 | WP_001234469.1 | DUF932 domain-containing protein | - |
| QJP57_RS24315 (52692) | 52692..52979 | - | 288 | WP_000107535.1 | hypothetical protein | - |
| QJP57_RS24320 (53277) | 53277..53451 | + | 175 | Protein_63 | hypothetical protein | - |
| QJP57_RS24325 (53449) | 53449..53679 | - | 231 | WP_001426396.1 | hypothetical protein | - |
| QJP57_RS24330 (53898) | 53898..54023 | - | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| QJP57_RS24335 (53965) | 53965..54114 | - | 150 | Protein_66 | plasmid maintenance protein Mok | - |
| - (54100) | 54100..54227 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - (54100) | 54100..54227 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - (54100) | 54100..54227 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| - (54100) | 54100..54227 | - | 128 | NuclAT_0 | - | Antitoxin Detail |
| QJP57_RS24340 (54254) | 54254..55623 | - | 1370 | Protein_67 | IS3-like element IS150 family transposase | - |
| - (55669) | 55669..55771 | - | 103 | NuclAT_1 | - | - |
| - (55669) | 55669..55771 | - | 103 | NuclAT_1 | - | - |
| - (55669) | 55669..55771 | - | 103 | NuclAT_1 | - | - |
| - (55669) | 55669..55771 | - | 103 | NuclAT_1 | - | - |
| QJP57_RS24345 (55740) | 55740..56501 | - | 762 | Protein_68 | plasmid SOS inhibition protein A | - |
| QJP57_RS24350 (56498) | 56498..56932 | - | 435 | WP_000845949.1 | conjugation system SOS inhibitor PsiB | - |
| QJP57_RS24355 (56986) | 56986..58942 | - | 1957 | Protein_70 | ParB/RepB/Spo0J family partition protein | - |
| QJP57_RS24360 (59008) | 59008..59241 | - | 234 | WP_000005990.1 | DUF905 family protein | - |
| QJP57_RS24365 (59304) | 59304..59837 | - | 534 | WP_283184685.1 | single-stranded DNA-binding protein | - |
| QJP57_RS24370 (60147) | 60147..61847 | - | 1701 | WP_283184684.1 | group II intron reverse transcriptase/maturase | - |
| QJP57_RS24375 (62525) | 62525..62731 | - | 207 | WP_024216783.1 | hypothetical protein | - |
| QJP57_RS24380 (62972) | 62972..63229 | - | 258 | WP_023147917.1 | hypothetical protein | - |
| QJP57_RS24385 (63142) | 63142..63354 | - | 213 | WP_001348622.1 | hypothetical protein | - |
| QJP57_RS24390 (63380) | 63380..63943 | - | 564 | WP_001348621.1 | class I SAM-dependent methyltransferase | - |
| QJP57_RS24395 (63990) | 63990..65351 | - | 1362 | WP_032179747.1 | DUF3560 domain-containing protein | - |
| QJP57_RS24400 (65403) | 65403..65633 | - | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP57_RS24405 (66148) | 66148..66396 | + | 249 | WP_071587243.1 | hypothetical protein | - |
| QJP57_RS24410 (66669) | 66669..66860 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP57_RS24415 (66857) | 66857..67279 | - | 423 | WP_000271753.1 | DUF1380 family protein | - |
| QJP57_RS24420 (67326) | 67326..67751 | - | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP57_RS24425 (68328) | 68328..69440 | - | 1113 | WP_001300563.1 | IS4 family transposase IS421 | Transposase |
| QJP57_RS24430 (69517) | 69517..70293 | - | 777 | WP_001753849.1 | hypothetical protein | - |
| QJP57_RS24435 (70344) | 70344..70862 | - | 519 | WP_227288155.1 | DUF1380 family protein | - |
| QJP57_RS24440 (70792) | 70792..71013 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP57_RS24445 (71014) | 71014..71697 | - | 684 | WP_000086185.1 | DNA methylase | - |
| QJP57_RS24450 (71774) | 71774..72085 | - | 312 | WP_042045883.1 | hypothetical protein | - |
| QJP57_RS24455 (72082) | 72082..72984 | - | 903 | WP_077727434.1 | DUF1281 domain-containing protein | - |
| QJP57_RS24460 (73847) | 73847..74818 | - | 972 | WP_000817036.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QJP57_RS24465 (74818) | 74818..75984 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| QJP57_RS24470 (76572) | 76572..77327 | - | 756 | WP_000852146.1 | replication initiation protein RepE | - |
| QJP57_RS24475 (78101) | 78101..78907 | - | 807 | WP_000016982.1 | site-specific integrase | - |
| QJP57_RS24480 (78908) | 78908..79213 | - | 306 | WP_001159868.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QJP57_RS24485 (79215) | 79215..79433 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QJP57_RS24490 (80012) | 80012..81100 | + | 1089 | WP_000952217.1 | transcriptional repressor PifC | - |
| QJP57_RS24495 (81102) | 81102..83327 | + | 2226 | WP_000698737.1 | P-loop NTPase fold protein | - |
| QJP57_RS24500 (83377) | 83377..84276 | - | 900 | WP_000963206.1 | nucleotide-binding protein | - |
| QJP57_RS24505 (84266) | 84266..84556 | - | 291 | WP_000538310.1 | hypothetical protein | - |
| QJP57_RS24510 (86672) | 86672..87313 | + | 642 | WP_033550835.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|